FC929261
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC929261 vs. ExPASy Swiss-Prot
Match: RMLA_SALTY (Glucose-1-phosphate thymidylyltransferase OS=Salmonella typhimurium GN=rmlA PE=1 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 1.004e-11 Identity = 59/229 (25.76%), Postives = 110/229 (48.03%), Query Frame = 1 Query: 148 TMKALILVGGFGTRLRPLTLSVPKPLVEFANKPMILHQIEALKAVGVTEVVLAINYQPEVMLNFLKEFEAKLGIKIICSQETEPLGTAGPLALARDKLIDDTGEPFFVLNSDVISEYPFAEMIEFHKAHGGEASIMVTKVDEPSKYGVVVTEESTGKVEKFVEKPKLFVGNKINAGIYLLNPAVLDRIE-LRPTS---IEKEVFPKIALE-GKL-FAMVLPGF-WMDIG 813 T K +IL GG GTRL P+T++V K L+ +KPMI + + L G+ ++++ Q L ++ G+ + + P G A + + + D + VL ++ + +++E A++ V++P +YGVV ++ G EKP N G+Y + +V++ + L+P++ +E +I +E G+L AM+ G+ W+D G Sbjct: 3 TRKGIILAGGSGTRLYPVTMAVSKQLLPIYDKPMIYYPLSTLMLAGIRDILIISTPQDTPRFQQLLGDGSQWGLNLQYKVQPSPDGLAQAFIIGEEFIGHD--DCALVLGDNIFYGHDLPKLMEAAVNKESGATVFAYHVNDPERYGVVEFDQK-GTAVSLEEKPLQPKSNYAVTGLYFYDNSVVEMAKNLKPSARGELEITDINRIYMEQGRLSVAMMGRGYAWLDTG 228
BLAST of FC929261 vs. ExPASy Swiss-Prot
Match: RMLA_RHISN (Probable glucose-1-phosphate thymidylyltransferase OS=Rhizobium sp. (strain NGR234) GN=rmlA PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 1.004e-11 Identity = 64/231 (27.71%), Postives = 106/231 (45.89%), Query Frame = 1 Query: 151 MKALILVGGFGTRLRPLTLSVPKPLVEFANKPMILHQIEALKAVGVTEVVLAINYQPEVMLNFLKEFEAKLGIKIICSQETEPLGTAGPLALARDKLIDDTGEP-FFVLNSDVISEYPFAEMIEFHKAHGGEASIMVTKVDEPSKYGVVVTEESTGKVEKFVEKPKLFVGNKINAGIYLLNPAVLD-RIELRPTS---IEKEVFPKIALE-GKLFAMVL-PGF-WMDIGQP 819 MK +IL GG GTRL P+TL + K ++ +KPMI + + L G+ E+++ + L ++ GI + + + P G A + D + G P +L ++ + +++ A A+I V++P +YGVV +E + EKP G+Y + V+D L+P++ E +I LE GKL VL G+ W+D G P Sbjct: 1 MKGIILAGGSGTRLHPMTLVMSKQILPVYDKPMIFYPLTTLMLAGIREILIISTPHHMPLFQALLGDGSQWGISLRYAVQPSPNGLAQAYVIGADFV---AGSPSCLILGDNIYFGHGLQGLLQQAAALQQGATIFAYHVNDPERYGVVEFDEGMNAL-SIEEKPAAPKSTWAVTGLYFYDSEVVDIAANLKPSARGEYEITDVNRIYLERGKLKVAVLGRGYAWLDTGTP 227
BLAST of FC929261 vs. ExPASy Swiss-Prot
Match: RMLA3_ECOLX (Glucose-1-phosphate thymidylyltransferase OS=Escherichia coli GN=rmlA PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 1.004e-11 Identity = 61/230 (26.52%), Postives = 109/230 (47.39%), Query Frame = 1 Query: 148 TMKALILVGGFGTRLRPLTLSVPKPLVEFANKPMILHQIEALKAVGVTEVVLAINYQPEVMLNFLKEFEAKLGIKIICSQETEPLGTAGPLALARDKLIDDTGEPFFVLNSDVISEYPFAEMIEFHKAHGGEASIMVTKVDEPSKYGVVVTEESTGKVEKFVEKPKLFVGNKINAGIYLLNPAVLD--RIELRPTS---IEKEVFPKIALE-GKL-FAMVLPGF-WMDIG 813 T K +IL GG GTRL P+T++V K L+ +KPMI + + L G+ ++++ Q L ++ G+ + + P G A + D + D + VL ++ + +++E A++ V++P +YG VV ++ G EKP N G+Y + V++ R L+P++ +E +I +E G+L AM+ G+ W+D G Sbjct: 3 TRKGIILAGGSGTRLYPVTMAVSKQLLPIYDKPMIYYPLSTLMLAGIRDILIISTPQDTPRFQQLLGDGSQWGLNLQYKVQPSPDGLAQAFIIGEDFIGGD--DCALVLGDNIFYGHDLPKLMEAAVNKESGATVFAYHVNDPERYG-VVEFDNNGTAISLEEKPLEPKSNYAVTGLYFYDNDVVEMARKNLKPSARGELEITDINRIYMEQGRLSVAMMGRGYAWLDTG 229
BLAST of FC929261 vs. ExPASy Swiss-Prot
Match: GLGC_BACHD (Glucose-1-phosphate adenylyltransferase OS=Bacillus halodurans GN=glgC PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 1.004e-11 Identity = 64/240 (26.67%), Postives = 106/240 (44.17%), Query Frame = 1 Query: 160 LILVGGFGTRLRPLTLSVPKPLVEFANKPMILH-QIEALKAVGVTEVVLAINYQPEVMLNFLK-----EFEAKLGIKIICSQETEPLG------TAGPLALARDKLIDDTGEPFFVLNSDVISEYPFAEMIEFHKAHGGEASIMVTKV--DEPSKYGVVVTEESTGKVEKFVEKPKLFVGNKINAGIYLLNPAVLDRIELRPT-------SIEKEVFPK-IALEGKLFAMVLPGFWMDIG 813 ++L GG G RL LT + KP V F K I+ + G+ V + Y+P + + + + + G + E G TA + R + E +L+ D I + + MI HK G +A+I V +V +E S++G++ T E + +F EKP + N + GIY+ N +VL ++ K++ PK +A + KL A G+W D+G Sbjct: 8 MLLAGGEGKRLGQLTRKLAKPAVYFGGKYRIIDFPLSNCTNSGIDTVGVLTQYEPLALNGHIGIGSPWDLDRRHGGVTVLPPYIEKQGGSWYKGTADAIYQNRYYIEQYDPEYVLILSGDHIYKMDYDRMISHHKKLGADATISVIEVPWEEASRFGIMNTNEEM-TITQFEEKPTTPISNLASMGIYIFNWSVLKSYLIQDAKQANSSHDFGKDIIPKMLAKDLKLVAYPFEGYWKDVG 246
BLAST of FC929261 vs. ExPASy Swiss-Prot
Match: GLMU_PELPD (Bifunctional protein glmU OS=Pelobacter propionicus (strain DSM 2379) GN=glmU PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.311e-11 Identity = 51/187 (27.27%), Postives = 94/187 (50.27%), Query Frame = 1 Query: 157 ALILVGGFGTRLRPLTLSVPKPLVEFANKPMILHQIEALKAVGVTEVVLAINYQPEVMLNFLKEFEAKLGIKIICSQETEPLGTAGPLALARDKLIDDTGEPFFVL-NSDVISEYPFAEMIEFHKAHGGEASIMVTKVDEPSKYGVVVTEESTGKVEKFVEK----PKLFVGNKINAGIYLLNPAVL 702 A+IL G GTR++ + V P+ A +PMI +EA + G VVL + +Q E + + F+ I C+ + E LGT +A A L +G + ++ ++ +++ FH++ G +++ +++ P YG V+ +E+ G+V + VE+ P+ +IN+GIY + L Sbjct: 6 AIILAAGKGTRMKSGLVKVLHPI---AGRPMIDWPLEAARGAGAAPVVLVVGHQAEAV---RERFQG--AGDIACALQAEQLGTGHAVACAAPALAGFSGTVLILCGDTPLLRGGTLTDLLAFHRSQGAAVTVLTARMENPHGYGRVLRDEA-GRVLRIVEQKDASPQECSVREINSGIYCMEAGFL 183
BLAST of FC929261 vs. ExPASy Swiss-Prot
Match: GLMU_DESRM (Bifunctional protein glmU OS=Desulfotomaculum reducens (strain MI-1) GN=glmU PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.311e-11 Identity = 53/206 (25.73%), Postives = 103/206 (50.00%), Query Frame = 1 Query: 151 MKALILVGGFGTRLRPLTLSVPKPLVEFANKPMILHQIEALKAVGVTEVVLAINYQPEVMLNFLKEFEAKLGIKIICSQETEPLGTAGPLALARDKLIDDTGEPFFVL-NSDVISEYPFAEMIEFHKAHGGEASIMVTKVDEPSKYGVVVTEESTGKVEKFVEK----PKLFVGNKINAGIYLLN-PAVLDRI-ELRPTSIEKEVF 747 + A+IL G GTR++ ++PK L + +PM+ H + ++ A GV + V+ + E + +F +G K + E LGTA L A +L D G V ++ ++ A++ ++H G A+++ ++ +P+ YG V+ + G V VE+ P+ ++IN G+Y P + + + E+ P +++ E + Sbjct: 3 LAAVILAAGKGTRMKS---NLPKVLHQLCGRPMLSHVLNSVVAAGVDKTVVVAGFGAEQVTDF-------VGEKARVVLQREQLGTAHALLQAEGELTDYPGHLLVVCGDTPLLRAETLAKLADYHCESGAVATLLTAEMADPTGYGRVI-RTTEGNVSHIVEQKDASPEELNVHEINTGVYCFKVPGLFNALKEISPANVQGEYY 197
BLAST of FC929261 vs. ExPASy Swiss-Prot
Match: EI2BG_RAT (Translation initiation factor eIF-2B subunit gamma OS=Rattus norvegicus GN=Eif2b3 PE=2 SV=2) HSP 1 Score: 70.4774 bits (171), Expect = 1.311e-11 Identity = 42/143 (29.37%), Postives = 75/143 (52.45%), Query Frame = 1 Query: 154 KALILVGGFGTRLRPLTLSVPKPLVEFANKPMILHQIEALKAVGVTEVVLAINYQPEVMLNFLKEFEAKLGIKIICSQETEPLGTAGPLALARDKLIDDTGEPFFVLNSDVISEYPFAEMIEFHKAHGGEASIMVTKVDEPSK 582 +A+++ G G+R+ LT S+PKPL+ NKP+I + + L+ VG EV++ +V EF+ KL I+C + +GTA L KL D VL D+I++ E+++ +A+ ++++ K E ++ Sbjct: 4 QAVVMAVGGGSRMTDLTSSIPKPLLPVGNKPLIWYPLNLLERVGFEEVIVVTT--KDVQKALCAEFKMKLKPDIVCIPDEADMGTADSLRHIYPKLKTDV----LVLGCDLITDVALHEVVDLFRAYDASLAMLMRKGQESTE 140
BLAST of FC929261 vs. ExPASy Swiss-Prot
Match: GLGC_THELT (Glucose-1-phosphate adenylyltransferase OS=Thermotoga lettingae (strain ATCC BAA-301 / DSM 14385 / TMO) GN=glgC PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 2.236e-11 Identity = 65/245 (26.53%), Postives = 114/245 (46.53%), Query Frame = 1 Query: 157 ALILVGGFGTRLRPLTLSVPKPLVEFANK-PMILHQIEALKAVGVTEVVLAINYQPEVMLNFLK-----EFEAKLGIKIICSQETEPL-----GTAGPLALARDKLIDDTGEPFFV--LNSDVISEYPFAEMIEFHKAHGGEASIMVTKV--DEPSKYGVVVTEESTGKVEKFVEKPKLFVGNKINAGIYLLNPAVLDRIELRPTSIEK-------EVFPKIALEG-KLFAMVLPGFWMDIGQPR 822 ALIL GG G RL LT + KP V F K +I + G+ V + Y+P ++ N + + + K G I + GTA A+ ++ D+ +P FV L+ D + + ++I+FH G E +I +V +E +++G+++T+ + ++ F EKP+ N + GIY+ N L +R + ++ P + EG +++A G+W D+G R Sbjct: 6 ALILAGGHGKRLGVLTEKIAKPAVPFGGKYRLIDFTLSNCVNSGIYHVGVLTQYRPHLLNNHINIGRPWDLDRKKGGVTILPPYLGGVAGWYRGTAN--AVYQNIEYVDSADPDFVLILSGDHVYAMDYNDIIDFHILKGAEGTIACIEVPPEETNRFGIMMTDLDS-RIVDFEEKPQRARSNLASLGIYVFNWKFLKEYLIRDEQNNESTHDFGHDIIPLMINEGCQIYAFKFNGYWRDVGTVR 247
BLAST of FC929261 vs. ExPASy Swiss-Prot
Match: GLGC_STRR6 (Glucose-1-phosphate adenylyltransferase OS=Streptococcus pneumoniae (strain ATCC BAA-255 / R6) GN=glgC PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 2.236e-11 Identity = 60/243 (24.69%), Postives = 108/243 (44.44%), Query Frame = 1 Query: 151 MKALILVGGFGTRLRPLTLSVPKPLVEFANKPMIL-HQIEALKAVGVTEVVLAINYQPEVMLNFLKEFEA------KLGIKIICSQETEP-----LGTAGPLALARDKLIDDTGEPFFVLNSDVISEYPFAEMIEFHKAHGGEASIMVTKV--DEPSKYGVVVTEESTGKVEKFVEKPKLFVGNKINAGIYLLN-------PAVLDRIELRPTSIEKEVFPKIALEGK-LFAMVLPGFWMDIG 813 M ALIL GG GTRL LT S+ KP V+F + I+ + G+ V + YQP + N + + G+ I+ GT+ + D + + E +L+ D I + + +M++ HK + ++ V V E S++G++ T ++ ++ +F EKP K + GIY+ + ++ ++ + K V P G+ ++A G+W D+G Sbjct: 5 MLALILAGGQGTRLGKLTQSIAKPAVQFGGRYRIIDFALSNCANSGIHNVGVVTQYQPLALNNHIGNGSSWGLDGINSGVSILQPYSASEGNRWFEGTSHAIYQNIDYIDNVNPEYVLILSGDHIYKMDYDDMLQSHKDNNASLTVAVLDVPLKEASRFGIMNT-DANNRIVEFEEKPAQPKSTKASMGIYIFDWQRLRNMLVAAEKSKVGMSDFGKNVIPNYLESGESVYAYEFSGYWKDVG 246
BLAST of FC929261 vs. ExPASy Swiss-Prot
Match: GLGC_STRP2 (Glucose-1-phosphate adenylyltransferase OS=Streptococcus pneumoniae serotype 2 (strain D39 / NCTC 7466) GN=glgC PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 2.236e-11 Identity = 60/243 (24.69%), Postives = 108/243 (44.44%), Query Frame = 1 Query: 151 MKALILVGGFGTRLRPLTLSVPKPLVEFANKPMIL-HQIEALKAVGVTEVVLAINYQPEVMLNFLKEFEA------KLGIKIICSQETEP-----LGTAGPLALARDKLIDDTGEPFFVLNSDVISEYPFAEMIEFHKAHGGEASIMVTKV--DEPSKYGVVVTEESTGKVEKFVEKPKLFVGNKINAGIYLLN-------PAVLDRIELRPTSIEKEVFPKIALEGK-LFAMVLPGFWMDIG 813 M ALIL GG GTRL LT S+ KP V+F + I+ + G+ V + YQP + N + + G+ I+ GT+ + D + + E +L+ D I + + +M++ HK + ++ V V E S++G++ T ++ ++ +F EKP K + GIY+ + ++ ++ + K V P G+ ++A G+W D+G Sbjct: 5 MLALILAGGQGTRLGKLTQSIAKPAVQFGGRYRIIDFALSNCANSGIHNVGVVTQYQPLALNNHIGNGSSWGLDGINSGVSILQPYSASEGNRWFEGTSHAIYQNIDYIDNVNPEYVLILSGDHIYKMDYDDMLQSHKDNNASLTVAVLDVPLKEASRFGIMNT-DANNRIVEFEEKPAQPKSTKASMGIYIFDWQRLRNMLVAAEKSKVGMSDFGKNVIPNYLESGESVYAYEFSGYWKDVG 246 The following BLAST results are available for this feature:
BLAST of FC929261 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 124
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Sequences
The
following sequences are available for this feature:
EST sequence >FC929261 ID=FC929261; Name=FC929261; organism=Citrus clementina; type=EST; length=823bpback to top |