FC929266

Overview
NameFC929266
Unique NameFC929266
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length793
Libraries
Library NameType
PhII-IIIV1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC929266 vs. ExPASy Swiss-Prot
Match: RPK1_ARATH (Probable LRR receptor-like serine/threonine-protein kinase RPK1 OS=Arabidopsis thaliana GN=RPK1 PE=1 SV=1)

HSP 1 Score: 161.77 bits (408), Expect = 4.025e-39
Identity = 89/235 (37.87%), Postives = 138/235 (58.72%), Query Frame = 3
Query:    3 EFLYEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALFGGENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEEEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNM--SYVPDSNCTCPLDWAFHLHRSGTLMELVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLE 701
            +F  EI+ +  ++HPNLV + G      ++ L+Y Y+   +L    F  E S+  + W V  KI L +AR L++LHE+   K++HRDIK +N+LLD + N  +SDFGL+KL    ++H++T VAGT GY+APEYA+   ++ KADVYS+G+V LE++S K  +  S+    N    + WA  +   G   E+    L       +   ++ +AL CT  S S+RPTM + V +L+
Sbjct:  301 QFHAEISALEMVRHPNLVMLIGYHASETEMFLIYNYLSGGNLQD--FIKERSKAAIEWKVLHKIALDVARALSYLHEQCSPKVLHRDIKPSNILLDNNYNAYLSDFGLSKLLGTSQSHVTTGVAGTFGYVAPEYAMTCRVSEKADVYSYGIVLLELISDKRALDPSFSSHENGFNIVSWAHMMLSQGKAKEVFTTGLWETGPPDDLVEVLHLALKCTVDSLSIRPTMKQAVRLLK 533          
BLAST of FC929266 vs. ExPASy Swiss-Prot
Match: MEE39_ARATH (Probable LRR receptor-like serine/threonine-protein kinase MEE39 OS=Arabidopsis thaliana GN=MEE39 PE=2 SV=1)

HSP 1 Score: 161.77 bits (408), Expect = 4.025e-39
Identity = 86/235 (36.60%), Postives = 138/235 (58.72%), Query Frame = 3
Query:    3 EFLYEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALFGGENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDE--EEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHRSGTLMELVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLE 701
            EF  E+ ++  + H NLV + G C E D   L+YEYM N  L H    G++    LNW  R +I +  A GL +LH   +  +VHRD+K+TN+LLD +   KI+DFGL++  +   +++ +ST VAGT+GY+ PEY L   L+ K+DVYSFG++ LEI++ +  +    ++      +W   + + G   ++VDP+L   ++     R +++A+ C N S   RP MS+V+  L+
Sbjct:  606 EFKAEVELLLRVHHINLVNLVGYCDEQDHFALIYEYMSNGDL-HQHLSGKHGGSVLNWGTRLQIAIEAALGLEYLHTGCKPAMVHRDVKSTNILLDEEFKAKIADFGLSRSFQVGGDQSQVSTVVAGTLGYLDPEYYLTSELSEKSDVYSFGILLLEIITNQRVIDQTRENPNIA--EWVTFVIKKGDTSQIVDPKLHGNYDTHSVWRALEVAMSCANPSSVKRPNMSQVIINLK 837          
BLAST of FC929266 vs. ExPASy Swiss-Prot
Match: ERECT_ARATH (LRR receptor-like serine/threonine-protein kinase ERECTA OS=Arabidopsis thaliana GN=ERECTA PE=1 SV=1)

HSP 1 Score: 161.77 bits (408), Expect = 4.025e-39
Identity = 100/257 (38.91%), Postives = 150/257 (58.37%), Query Frame = 3
Query:    3 EFLYEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALFGGENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEEEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHRSGT----LMELVDPRLGSEFNKV-EAERMIKIALLCTNASPSLRPTMSEVVSMLEGSSNIPDVIPEAGGLSEDL 758
            +F  E+ M+S ++H NLV +    +     LL Y+Y+EN SL   L G    +  L+W  R KI  G A+GLA+LH +   +I+HRD+K++N+LLD+DL  +++DFG+AK     K+H ST V GTIGY+ PEYA    LT K+DVYS+G+V LE+++ +  +    +SN         HL  S T    +ME+ DP + S    +   +++ ++ALLCT   P+ RPTM +V  +L GS  + +  P A   S  L
Sbjct:  688 QFETELEMLSSIKHRNLVSLQAYSLSHLGSLLFYDYLENGSLWDLLHGPTKKKT-LDWDTRLKIAYGAAQGLAYLHHDCSPRIIHRDVKSSNILLDKDLEARLTDFGIAKSLCVSKSHTSTYVMGTIGYIDPEYARTSRLTEKSDVYSYGIVLLELLTRRKAVD--DESN-------LHHLIMSKTGNNEVMEMADPDITSTCKDLGVVKKVFQLALLCTKRQPNDRPTMHQVTRVL-GSFMLSEQPPAATDTSATL 933          
BLAST of FC929266 vs. ExPASy Swiss-Prot
Match: THE1_ARATH (Receptor-like protein kinase THESEUS 1 OS=Arabidopsis thaliana GN=THE1 PE=1 SV=1)

HSP 1 Score: 161.384 bits (407), Expect = 5.256e-39
Identity = 91/234 (38.89%), Postives = 136/234 (58.12%), Query Frame = 3
Query:    3 EFLYEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALFGGENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEE-EKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHRSGTLMELVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLE 701
            EF  EI M+S L+H +LV + G C E  +++LVYEYM N  L   L+G +   L  +W  R +IC+G ARGL +LH  +   I+HRD+K TN+LLD +L  K++DFGL+K     ++TH+ST V G+ GY+ PEY     LT K+DVYSFGVV +E++  +  ++ V         +WA    + G L +++D  L  + N    ++  + A  C       RP+M +V+  LE
Sbjct:  550 EFRTEIEMLSKLRHRHLVSLIGYCDERSEMILVYEYMANGPLRSHLYGADLPPL--SWKQRLEICIGAARGLHYLHTGASQSIIHRDVKTTNILLDENLVAKVADFGLSKTGPSLDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLCCRPALNPVLPREQVNIAEWAMAWQKKGLLDQIMDSNLTGKVNPASLKKFGETAEKCLAEYGVDRPSMGDVLWNLE 781          
BLAST of FC929266 vs. ExPASy Swiss-Prot
Match: RCH1_ARATH (LRR receptor-like serine/threonine-protein kinase RCH1 OS=Arabidopsis thaliana GN=RCH1 PE=2 SV=1)

HSP 1 Score: 161.384 bits (407), Expect = 5.256e-39
Identity = 95/233 (40.77%), Postives = 134/233 (57.51%), Query Frame = 3
Query:    6 FLYEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALFGGENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKL-DEEEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMS-YVPDSNCTCPLDWAFHLHRSGTLMELVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSML 698
            F  E+  +  ++H N+V+  GCC   +  LL+Y+YM N SL  +L    +    L W VR KI LG A+GLA+LH +    IVHRDIKA N+L+  D  P I DFGLAKL D+ +    S  +AG+ GY+APEY     +T K+DVYS+GVV LE+++GK  +   +PD      +DW   +     + + +  R  SE    E  + + +ALLC N  P  RPTM +V +ML
Sbjct:  836 FSAEVKTLGSIRHKNIVRFLGCCWNKNTRLLMYDYMSNGSLG-SLLHERSGVCSLGWEVRYKIILGAAQGLAYLHHDCVPPIVHRDIKANNILIGPDFEPYIGDFGLAKLVDDGDFARSSNTIAGSYGYIAPEYGYSMKITEKSDVYSYGVVVLEVLTGKQPIDPTIPDG--LHIVDWVKKIRDIQVIDQGLQARPESEVE--EMMQTLGVALLCINPIPEDRPTMKDVAAML 1063          
BLAST of FC929266 vs. ExPASy Swiss-Prot
Match: Y4391_ARATH (Probable receptor-like protein kinase At4g39110 OS=Arabidopsis thaliana GN=At4g39110 PE=1 SV=1)

HSP 1 Score: 160.614 bits (405), Expect = 8.966e-39
Identity = 91/233 (39.06%), Postives = 130/233 (55.79%), Query Frame = 3
Query:    3 EFLYEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALFGGENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEEEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHRSGTLMELVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLE 701
            EF  EI M+S L+H +LV + G C E  +++LVYE+M N      L+G   +   L W  R +IC+G ARGL +LH  +   I+HRD+K+TN+LLD  L  K++DFGL+K     + H+ST V G+ GY+ PEY     LT K+DVYSFGVV LE +  +  ++           +WA    R G L +++DP L    N    ++  + A  C       RPTM +V+  LE
Sbjct:  566 EFQTEIQMLSKLRHRHLVSLIGYCDENSEMILVYEFMSNGPFRDHLYG--KNLAPLTWKQRLEICIGSARGLHYLHTGTAQGIIHRDVKSTNILLDEALVAKVADFGLSKDVAFGQNHVSTAVKGSFGYLDPEYFRRQQLTDKSDVYSFGVVLLEALCARPAINPQLPREQVNLAEWAMQWKRKGLLEKIIDPHLAGTINPESMKKFAEAAEKCLEDYGVDRPTMGDVLWNLE 796          
BLAST of FC929266 vs. ExPASy Swiss-Prot
Match: Y1743_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g74360 OS=Arabidopsis thaliana GN=At1g74360 PE=1 SV=1)

HSP 1 Score: 160.614 bits (405), Expect = 8.966e-39
Identity = 88/224 (39.29%), Postives = 132/224 (58.93%), Query Frame = 3
Query:   42 HPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALFGGENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEEEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWA-----FHLHRSGTLMELVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSML 698
            HPNLV+++G C++G + +LV+EYM   SL   +      + KL W  R  I   +ARGL FLH E    IVHRD+KA+NVLLD+  N +++DFGLA+L     +H+ST +AGTIGY+APEY      T + DVYS+GV+ +E+ +G+  +    D    C ++WA      ++   G+ + L   + G+     +   ++KI + CT   P  RP M EV++ML
Sbjct:  872 HPNLVRLYGWCLDGSEKILVHEYMGGGSLEELI----TDKTKLQWKKRIDIATDVARGLVFLHHECYPSIVHRDVKASNVLLDKHGNARVTDFGLARLLNVGDSHVSTVIAGTIGYVAPEYGQTWQATTRGDVYSYGVLTMELATGRRAV----DGGEECLVEWARRVMTGNMTAKGSPITLSGTKPGN--GAEQMTELLKIGVKCTADHPQARPNMKEVLAML 1085          
BLAST of FC929266 vs. ExPASy Swiss-Prot
Match: PTI1_SOLLC (Pto-interacting protein 1 OS=Solanum lycopersicum GN=PTI1 PE=1 SV=2)

HSP 1 Score: 160.614 bits (405), Expect = 8.966e-39
Identity = 93/239 (38.91%), Postives = 136/239 (56.90%), Query Frame = 3
Query:    3 EFLYEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALFG-----GENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEEEKTHI-STRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHRSGTLMELVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLE 701
            EFL +++M+S L+  N+V++ G CV+G   +L YEY  N SL   L G     G      L+W  R KI +G A+GL +LHE+++  I+HRDIK++N+LL  D   KI+DF L+    +    + STRV GT GY APEYA+ G L+ K+DVYSFGVV LE+++G+  + +         + WA        + + VD RL +++      +M  +A LC       RP MS VV  L+
Sbjct:  107 EFLAQVSMVSRLKDENVVELLGYCVDGGFRVLAYEYAPNGSLHDILHGRKGVKGAQPGPVLSWAQRVKIAVGAAKGLEYLHEKAQPHIIHRDIKSSNILLFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLSSKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWATPRLSEDKVKQCVDARLNTDYPPKAIAKMAAVAALCVQYEADFRPNMSIVVKALQ 345          
BLAST of FC929266 vs. ExPASy Swiss-Prot
Match: Y5148_ARATH (Probable leucine-rich repeat receptor-like protein kinase At5g61480 OS=Arabidopsis thaliana GN=At5g61480 PE=1 SV=1)

HSP 1 Score: 160.229 bits (404), Expect = 1.171e-38
Identity = 87/236 (36.86%), Postives = 147/236 (62.29%), Query Frame = 3
Query:    9 LYEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALFGGENSQLKL-NWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEEEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPD-SNCTCPLDWA-FHLHRSGTLMELVDPRLGSEFNKV--EAERMIKIALLCTNASPSLRPTMSEVVSMLE 701
            L E+ ++  ++H N+V++ GCC   D  +L+YEYM N SL   L GG+ +      W    +I +G+A+G+ +LH +    IVHRD+K +N+LLD D   +++DFG+AKL + +++   + VAG+ GY+APEYA    +  K+D+YS+GV+ LEI++GK ++   P+       +DW    L     + E++D  +G   + +  E ++M++IALLCT+ SP+ RP M +V+ +L+
Sbjct:  767 LAEVDVLGNVRHRNIVRLLGCCTNRDCTMLLYEYMPNGSLDDLLHGGDKTMTAAAEWTALYQIAIGVAQGICYLHHDCDPVIVHRDLKPSNILLDADFEARVADFGVAKLIQTDES--MSVVAGSYGYIAPEYAYTLQVDKKSDIYSYGVILLEIITGKRSVE--PEFGEGNSIVDWVRSKLKTKEDVEEVLDKSMGRSCSLIREEMKQMLRIALLCTSRSPTDRPPMRDVLLILQ 998          
BLAST of FC929266 vs. ExPASy Swiss-Prot
Match: Y2197_ARATH (Probable protein kinase At2g41970 OS=Arabidopsis thaliana GN=At2g41970 PE=2 SV=1)

HSP 1 Score: 160.229 bits (404), Expect = 1.171e-38
Identity = 88/251 (35.06%), Postives = 138/251 (54.98%), Query Frame = 3
Query:    3 EFLYEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALFGGENSQLK-----LNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEEEKTHI-STRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHRSGTLMELVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLEGSSNIPDVIPEA 737
            +F  +++++S L+H + V++ G C+E +  +L+Y++    SL   L G +  Q       LNW  R KI  G A+GL FLHE+ +  IVHRD++++NVLL  D   K++DF L     +    + STRV GT GY APEYA+ G +T K+DVYSFGVV LE+++G+  + +         + WA        + + +DP+L ++F      ++  +A LC       RP M+ VV  L+   N     PE+
Sbjct:  113 DFTSQLSVVSRLKHDHFVELLGYCLEANNRILIYQFATKGSLHDVLHGRKGVQGAEPGPVLNWNQRVKIAYGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFVAKMADFNLTNASSDTAARLHSTRVLGTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLTGRKPVDHTMPKGQQSLVTWATPRLSEDKVKQCIDPKLNNDFPPKAVAKLAAVAALCVQYEADFRPNMTIVVKALQPLLNSKPAGPES 363          
The following BLAST results are available for this feature:
BLAST of FC929266 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
RPK1_ARATH4.025e-3937.87Probable LRR receptor-like serine/threonine-protei... [more]
MEE39_ARATH4.025e-3936.60Probable LRR receptor-like serine/threonine-protei... [more]
ERECT_ARATH4.025e-3938.91LRR receptor-like serine/threonine-protein kinase ... [more]
THE1_ARATH5.256e-3938.89Receptor-like protein kinase THESEUS 1 OS=Arabidop... [more]
RCH1_ARATH5.256e-3940.77LRR receptor-like serine/threonine-protein kinase ... [more]
Y4391_ARATH8.966e-3939.06Probable receptor-like protein kinase At4g39110 OS... [more]
Y1743_ARATH8.966e-3939.29Probable LRR receptor-like serine/threonine-protei... [more]
PTI1_SOLLC8.966e-3938.91Pto-interacting protein 1 OS=Solanum lycopersicum ... [more]
Y5148_ARATH1.171e-3836.86Probable leucine-rich repeat receptor-like protein... [more]
Y2197_ARATH1.171e-3835.06Probable protein kinase At2g41970 OS=Arabidopsis t... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAH2AF05RM1 PhII-IIIV1 Citrus clementina cDNA clone KN0AAH2AF05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929266 ID=FC929266; Name=FC929266; organism=Citrus clementina; type=EST; length=793bp
GTGAATTCTTATATGAGATAGCCATGATTTCGTGTTTGCAACACCCAAAT
CTTGTTAAAATTCATGGCTGTTGTGTTGAAGGGGATCAACTCTTGCTAGT
ATATGAATACATGGAAAACAACAGCCTTGCCCATGCTTTATTCGGTGGCG
AAAACAGTCAACTGAAATTGAACTGGCCAGTGAGGCAGAAGATCTGCCTT
GGGATAGCCAGAGGTTTAGCTTTTCTACATGAAGAATCCAGATTCAAAAT
AGTTCATAGAGACATCAAAGCTACGAATGTTCTGCTAGATAGAGATTTAA
ACCCCAAAATATCTGACTTTGGACTGGCTAAGCTTGATGAGGAGGAAAAA
ACTCACATCAGTACTCGAGTTGCTGGAACAATAGGATATATGGCACCAGA
GTACGCTCTATGGGGTTACTTGACCTACAAAGCAGATGTTTACAGTTTCG
GAGTTGTGGCTTTGGAAATCGTCAGTGGGAAGAATAATATGAGTTATGTG
CCAGACAGTAATTGCACCTGTCCTCTTGACTGGGCCTTCCATTTACACCG
AAGTGGTACGTTAATGGAGTTAGTGGATCCAAGGCTCGGATCAGAATTCA
ACAAGGTTGAAGCAGAGAGAATGATTAAAATAGCACTCTTATGCACCAAT
GCGTCACCTTCACTAAGGCCAACCATGTCTGAAGTGGTAAGCATGCTGGA
AGGATCTTCTAACATTCCGGATGTAATCCCTGAAGCCGGTGGTTTGAGTG
AAGACTTGAGGTTTAAAACTCTAAGAGAACATCCAAGAGAAAT
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