FC929266

Overview
NameFC929266
Unique NameFC929266
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length793
Libraries
Library NameType
PhII-IIIV1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC929266 vs. ExPASy Swiss-Prot
Match: Y4245_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At4g20450 OS=Arabidopsis thaliana GN=At4g20450 PE=2 SV=1)

HSP 1 Score: 159.844 bits (403), Expect = 1.529e-38
Identity = 86/234 (36.75%), Postives = 139/234 (59.40%), Query Frame = 3
Query:    3 EFLYEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALFGGENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAK-LDEEEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHRSGTLMELVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLE 701
            +F  E+ ++  + H NLV + G C EG  L+L+YEYM N +L   L  GENS+  L+W  R +I    A+GL +LH   +  ++HRDIK+ N+LLD +   K+ DFGL++      +TH+ST VAG+ GY+ PEY    +LT K+DV+SFGVV LEI++ +  +    + +     +W      +G +  +VDP +  +++     + +++A+ C + S S RP MS+V + L+
Sbjct:  631 QFKAEVDLLLRVHHINLVTLVGYCDEGQHLVLIYEYMSNGNLKQHL-SGENSRSPLSWENRLRIAAETAQGLEYLHIGCKPPMIHRDIKSMNILLDNNFQAKLGDFGLSRSFPVGSETHVSTNVAGSPGYLDPEYYRTNWLTEKSDVFSFGVVLLEIITSQPVIDQTREKSHIG--EWVGFKLTNGDIKNIVDPSMNGDYDSSSLWKALELAMSCVSPSSSGRPNMSQVANELQ 861          
BLAST of FC929266 vs. ExPASy Swiss-Prot
Match: Y3804_ARATH (Probably inactive leucine-rich repeat receptor-like protein kinase At3g28040 OS=Arabidopsis thaliana GN=At3g28040 PE=2 SV=1)

HSP 1 Score: 159.844 bits (403), Expect = 1.529e-38
Identity = 93/236 (39.41%), Postives = 139/236 (58.90%), Query Frame = 3
Query:    3 EFLYEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALFGGENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKL--DEEEKTHISTRVAGTIGYMAPEYALWGY-LTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHRSGTLMELVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLE 701
            +F  E+ +++  +HPNLV I G     D  LLV EY+ N +L   L   E S   L+W VR KI LG A+GLA+LH   R   +H ++K TN+LLD   NPKISDFGL++L   ++  T  + R    +GY+APE       +  K DVY FGV+ LE+V+G+  + Y  DS      D    +   G ++E +DP +  ++++ E   ++K+AL+CT+  PS RPTM+E+V +L+
Sbjct:  768 DFDREVRILAKAKHPNLVSIKGYFWTPDLHLLVSEYIPNGNLQSKLHEREPSTPPLSWDVRYKIILGTAKGLAYLHHTFRPTTIHFNLKPTNILLDEKNNPKISDFGLSRLLTTQDGNTMNNNRFQNALGYVAPELECQNLRVNEKCDVYGFGVLILELVTGRRPVEYGEDSFVILS-DHVRVMLEQGNVLECIDPVMEEQYSEDEVLPVLKLALVCTSQIPSNRPTMAEIVQILQ 1002          
BLAST of FC929266 vs. ExPASy Swiss-Prot
Match: Y1518_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g51860 OS=Arabidopsis thaliana GN=At1g51860 PE=2 SV=2)

HSP 1 Score: 159.844 bits (403), Expect = 1.529e-38
Identity = 92/235 (39.15%), Postives = 137/235 (58.30%), Query Frame = 3
Query:    3 EFLYEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALFGGENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAK-LDEEEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCP--LDWAFHLHRSGTLMELVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSML 698
            EF  E+ ++  + H +LV + G C +GD L L+YEYM N  L   + G     + L W  R +I +  A+GL +LH   R  +VHRD+K TN+LL+     K++DFGL++    + + H+ST VAGT GY+ PEY    +L+ K+DVYSFGVV LEIV+ +     V D     P   DW   +   G +  +VDP+L  +++   A +++++AL C N S + RPTM+ VV  L
Sbjct:  623 EFKAEVELLLRVHHRHLVGLVGYCDDGDNLALIYEYMANGDLRENMSGKRGGNV-LTWENRMQIAVEAAQGLEYLHNGCRPPMVHRDVKTTNILLNERCGAKLADFGLSRSFPIDGECHVSTVVAGTPGYLDPEYYRTNWLSEKSDVYSFGVVLLEIVTNQP----VIDKTRERPHINDWVGFMLTKGDIKSIVDPKLMGDYDTNGAWKIVELALACVNPSSNRRPTMAHVVMEL 852          
BLAST of FC929266 vs. ExPASy Swiss-Prot
Match: Y1357_ARATH (Probable receptor-like protein kinase At1g30570 OS=Arabidopsis thaliana GN=At1g30570 PE=1 SV=1)

HSP 1 Score: 159.844 bits (403), Expect = 1.529e-38
Identity = 93/234 (39.74%), Postives = 132/234 (56.41%), Query Frame = 3
Query:    3 EFLYEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALFGGENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEE-EKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHRSGTLMELVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLE 701
            EF  EI M+S L+H +LV + G C E ++++LVYEYM N +L   LFG  ++   L+W  R + C+G ARGL +LH  S   I+HRD+K TN+LLD +   K+SDFGL+K     + TH+ST V G+ GY+ PEY     LT K+DVYSFGVV  E V  +  ++     +     +WA    +   L  ++D  L   ++    E+  +IA  C       RP M EV+  LE
Sbjct:  560 EFETEIVMLSRLRHRHLVSLIGFCDEHNEMILVYEYMANGTLRSHLFG--SNLPPLSWKQRLEACIGSARGLHYLHTGSERGIIHRDVKTTNILLDENFVAKMSDFGLSKAGPSMDHTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFEAVCARAVINPTLPKDQINLAEWALSWQKQRNLESIIDSNLRGNYSPESLEKYGEIAEKCLADEGKNRPMMGEVLWSLE 791          
BLAST of FC929266 vs. ExPASy Swiss-Prot
Match: WAKLE_ARATH (Wall-associated receptor kinase-like 5 OS=Arabidopsis thaliana GN=WAKL5 PE=2 SV=2)

HSP 1 Score: 159.458 bits (402), Expect = 1.997e-38
Identity = 85/240 (35.42%), Postives = 133/240 (55.42%), Query Frame = 3
Query:    3 EFLYEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALFGGENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEEEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHRSGTLMELVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLEGSSNIPD 722
            +F+ EI ++S + H N+VK+ GCC+E +  +LVYEY+ N  +   L   E+    + W VR +I + IA  L ++H  + F I HRDIK TN+LLD     K+SDFG ++    ++TH++T VAGT GYM PEY L    T K+DVYSFGVV +E+++G+  +S +                +   +++++D R+  E    +   + K+A  C +     RP M E    LE   + P+
Sbjct:  472 KFINEIILLSQINHRNIVKLIGCCLETEVPILVYEYIPNGDMFKRLHD-ESDDYAMTWEVRLRIAIEIAGALTYMHSAASFPIYHRDIKTTNILLDEKYGAKVSDFGTSRSVTIDQTHLTTMVAGTFGYMDPEYFLSSQYTDKSDVYSFGVVLVELITGEKPLSRIRSEEGRGLATHFLEAMKENRVIDIIDIRIKEESKLDQLMAVAKLARKCLSRKGIKRPNMREASLELERIRSSPE 710          
BLAST of FC929266 vs. ExPASy Swiss-Prot
Match: Y1755_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g07550 OS=Arabidopsis thaliana GN=At1g07550 PE=2 SV=1)

HSP 1 Score: 159.073 bits (401), Expect = 2.609e-38
Identity = 88/232 (37.93%), Postives = 136/232 (58.62%), Query Frame = 3
Query:    3 EFLYEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALFGGENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEEEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHRSGTLMELVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSML 698
            EF  E+ ++  + H  LV + G C + + L L+YE M   +L   L G     + L+WP+R KI L  A G+ +LH   + KIVHRD+K+TN+LL  +   KI+DFGL++          T VAGT GY+ PEY     L+ K+DVYSFGVV LEI+SG++ +  +   NC   ++W   +  +G +  +VDP L  +++   A +++++A+ C N +   RP MS+VV +L
Sbjct:  599 EFKTEVELLLRVHHEKLVSLIGYCDDDNGLALIYELMGKGNLKEHLSGKPGCSV-LSWPIRLKIALESAIGIEYLHTGCKPKIVHRDVKSTNILLSEEFEAKIADFGLSRSFLIGNEAQPTVVAGTFGYLDPEYHKTSLLSMKSDVYSFGVVLLEIISGQDVID-LSRENCNI-VEWTSFILENGDIESIVDPNLHQDYDTSSAWKVVELAMSCVNRTSKERPNMSQVVHVL 827          
BLAST of FC929266 vs. ExPASy Swiss-Prot
Match: FERON_ARATH (Receptor-like protein kinase FERONIA OS=Arabidopsis thaliana GN=FER PE=1 SV=1)

HSP 1 Score: 159.073 bits (401), Expect = 2.609e-38
Identity = 90/247 (36.44%), Postives = 139/247 (56.28%), Query Frame = 3
Query:    3 EFLYEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALFGGENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEE-EKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHRSGTLMELVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLEGSSNIPDVIPEAG 740
            EF  EI M+S L+H +LV + G C E  +++LVY+YM + ++   L+  +N  L   W  R +IC+G ARGL +LH  ++  I+HRD+K TN+LLD     K+SDFGL+K     + TH+ST V G+ GY+ PEY     LT K+DVYSFGVV  E +  +  ++           +WA + ++ G L ++VDP L  +      ++  + A+ C       RP+M +V+  LE +  + +   E G
Sbjct:  577 EFQTEIEMLSKLRHRHLVSLIGYCEENCEMILVYDYMAHGTMREHLYKTQNPSLP--WKQRLEICIGAARGLHYLHTGAKHTIIHRDVKTTNILLDEKWVAKVSDFGLSKTGPTLDHTHVSTVVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFEALCARPALNPTLAKEQVSLAEWAPYCYKKGMLDQIVDPYLKGKITPECFKKFAETAMKCVLDQGIERPSMGDVLWNLEFALQLQESAEENG 821          
BLAST of FC929266 vs. ExPASy Swiss-Prot
Match: Y5707_ARATH (Probable receptor-like protein kinase At5g47070 OS=Arabidopsis thaliana GN=At5g47070 PE=1 SV=1)

HSP 1 Score: 158.688 bits (400), Expect = 3.407e-38
Identity = 97/239 (40.59%), Postives = 133/239 (55.65%), Query Frame = 3
Query:    3 EFLYEIAMISCLQHPNLVKIHGCCVE----GDQLLLVYEYMENNSLAHALFGGENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEE-EKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHR-SGTLMELVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLE 701
            ++L E+  +  + HPN+VK+ G C E    G + LLVYEYM N SL   LF   +  L   W  R +I LG A GL +LH+    K+++RD K++NVLLD    PK+SDFGLA+   + + TH++T   GT GY APEY   G+L  K+DVYSFGVV  EI++G+  +           LDW       S     +VDPRL + +    A  + K+A LC   +   RPTM  VV  L+
Sbjct:  133 QWLAEVQFLGVVNHPNVVKLIGYCSEDGETGIERLLVYEYMSNRSLEDHLFPRRSHTLP--WKKRLEIMLGAAEGLTYLHD---LKVIYRDFKSSNVLLDDQFCPKLSDFGLAREGPDGDNTHVTTARVGTHGYAAPEYVQTGHLRLKSDVYSFGVVLYEIITGRRTIERNKPVAERRLLDWVKEYPADSQRFSMIVDPRLRNNYPAAGARSLAKLADLCLKKNDKERPTMEIVVERLK 366          
BLAST of FC929266 vs. ExPASy Swiss-Prot
Match: Y5188_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g51880 OS=Arabidopsis thaliana GN=At1g51880 PE=2 SV=1)

HSP 1 Score: 158.688 bits (400), Expect = 3.407e-38
Identity = 88/233 (37.77%), Postives = 137/233 (58.80%), Query Frame = 3
Query:    3 EFLYEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALFGGENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAK-LDEEEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHRSGTLMELVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSML 698
            EF  E+ ++  + H NLV + G C +GD L L+YEYM N  L   + G     + L W  R +I +  A+GL +LH      +VHRD+K TN+LL+     K++DFGL++    + ++H+ST VAGT GY+ PEY    +L+ K+DVYSFGVV LEIV+ +       +   T   +W   +   G +  ++DP+L  +++   A +++++AL C N S + RPTM+ VV+ L
Sbjct:  605 EFKAEVELLLRVHHRNLVGLVGYCDDGDNLALIYEYMANGDLKENMSGKRGGNV-LTWENRMQIAVEAAQGLEYLHNGCTPPMVHRDVKTTNILLNERYGAKLADFGLSRSFPVDGESHVSTVVAGTPGYLDPEYYRTNWLSEKSDVYSFGVVLLEIVTNQPVTDKTRER--THINEWVGSMLTKGDIKSILDPKLMGDYDTNGAWKIVELALACVNPSSNRRPTMAHVVTEL 834          
BLAST of FC929266 vs. ExPASy Swiss-Prot
Match: Y2289_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At2g28960 OS=Arabidopsis thaliana GN=At2g28960 PE=2 SV=1)

HSP 1 Score: 158.688 bits (400), Expect = 3.407e-38
Identity = 89/234 (38.03%), Postives = 129/234 (55.13%), Query Frame = 3
Query:    3 EFLYEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALFGGENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAK-LDEEEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHRSGTLMELVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLE 701
            EF  E+ ++  + H NLV + G C E   L L+YEY  N  L   L  GE     L W  R KI +  A+GL +LH   +  +VHRD+K TN+LLD     K++DFGL++      +TH+ST VAGT GY+ PEY     L  K+DVYSFG+V LEI++ +  +    +        W  ++   G +  +VDPRL  ++      + ++IA+ C N S   RPTMS+V + L+
Sbjct:  613 EFKAEVELLLRVHHVNLVSLVGYCDEESNLALLYEYAPNGDLKQHL-SGERGGSPLKWSSRLKIVVETAQGLEYLHTGCKPPMVHRDVKTTNILLDEHFQAKLADFGLSRSFPVGGETHVSTAVAGTPGYLDPEYYRTNRLNEKSDVYSFGIVLLEIITSRPVIQQTREKPHIAA--WVGYMLTKGDIENVVDPRLNRDYEPTSVWKALEIAMSCVNPSSEKRPTMSQVTNELK 843          
The following BLAST results are available for this feature:
BLAST of FC929266 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
Y4245_ARATH1.529e-3836.75Probable LRR receptor-like serine/threonine-protei... [more]
Y3804_ARATH1.529e-3839.41Probably inactive leucine-rich repeat receptor-lik... [more]
Y1518_ARATH1.529e-3839.15Probable LRR receptor-like serine/threonine-protei... [more]
Y1357_ARATH1.529e-3839.74Probable receptor-like protein kinase At1g30570 OS... [more]
WAKLE_ARATH1.997e-3835.42Wall-associated receptor kinase-like 5 OS=Arabidop... [more]
Y1755_ARATH2.609e-3837.93Probable LRR receptor-like serine/threonine-protei... [more]
FERON_ARATH2.609e-3836.44Receptor-like protein kinase FERONIA OS=Arabidopsi... [more]
Y5707_ARATH3.407e-3840.59Probable receptor-like protein kinase At5g47070 OS... [more]
Y5188_ARATH3.407e-3837.77Probable LRR receptor-like serine/threonine-protei... [more]
Y2289_ARATH3.407e-3838.03Probable LRR receptor-like serine/threonine-protei... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAH2AF05RM1 PhII-IIIV1 Citrus clementina cDNA clone KN0AAH2AF05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929266 ID=FC929266; Name=FC929266; organism=Citrus clementina; type=EST; length=793bp
GTGAATTCTTATATGAGATAGCCATGATTTCGTGTTTGCAACACCCAAAT
CTTGTTAAAATTCATGGCTGTTGTGTTGAAGGGGATCAACTCTTGCTAGT
ATATGAATACATGGAAAACAACAGCCTTGCCCATGCTTTATTCGGTGGCG
AAAACAGTCAACTGAAATTGAACTGGCCAGTGAGGCAGAAGATCTGCCTT
GGGATAGCCAGAGGTTTAGCTTTTCTACATGAAGAATCCAGATTCAAAAT
AGTTCATAGAGACATCAAAGCTACGAATGTTCTGCTAGATAGAGATTTAA
ACCCCAAAATATCTGACTTTGGACTGGCTAAGCTTGATGAGGAGGAAAAA
ACTCACATCAGTACTCGAGTTGCTGGAACAATAGGATATATGGCACCAGA
GTACGCTCTATGGGGTTACTTGACCTACAAAGCAGATGTTTACAGTTTCG
GAGTTGTGGCTTTGGAAATCGTCAGTGGGAAGAATAATATGAGTTATGTG
CCAGACAGTAATTGCACCTGTCCTCTTGACTGGGCCTTCCATTTACACCG
AAGTGGTACGTTAATGGAGTTAGTGGATCCAAGGCTCGGATCAGAATTCA
ACAAGGTTGAAGCAGAGAGAATGATTAAAATAGCACTCTTATGCACCAAT
GCGTCACCTTCACTAAGGCCAACCATGTCTGAAGTGGTAAGCATGCTGGA
AGGATCTTCTAACATTCCGGATGTAATCCCTGAAGCCGGTGGTTTGAGTG
AAGACTTGAGGTTTAAAACTCTAAGAGAACATCCAAGAGAAAT
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