FC929266

Overview
NameFC929266
Unique NameFC929266
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length793
Libraries
Library NameType
PhII-IIIV1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC929266 vs. ExPASy Swiss-Prot
Match: WAKLO_ARATH (Wall-associated receptor kinase-like 14 OS=Arabidopsis thaliana GN=WAKL14 PE=2 SV=2)

HSP 1 Score: 156.762 bits (395), Expect = 1.295e-37
Identity = 89/236 (37.71%), Postives = 131/236 (55.51%), Query Frame = 3
Query:    3 EFLYEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALFGGENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEEEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHRSGTLMELVDPRLGSEFNK---VEAERMIKIALLCTNASPSLRPTMSEVVSMLE 701
            + + EI ++S + HPNLV++ GCC+E    +LVYEYM N +L+  L     S L   W +R  +    A+ +A+LH      I HRDIK+TN+LLD D N K++DFGL++L   E +HIST   GT GY+ P+Y    +L+ K+DVYSFGVV  EI++G   + +            A     SG + E++DP L  + +         + ++A  C      +RPTM+EV   LE
Sbjct:  388 QVMNEIKLLSSVSHPNLVRLLGCCIEQGDPVLVYEYMPNGTLSEHLQRDRGSGLP--WTLRLTVATQTAKAIAYLHSSMNPPIYHRDIKSTNILLDYDFNSKVADFGLSRLGMTESSHISTAPQGTPGYLDPQYHQCFHLSDKSDVYSFGVVLAEIITGLKVVDFTRPHTEINLAALAVDKIGSGCIDEIIDPILDLDLDAWTLSSIHTVAELAFRCLAFHSDMRPTMTEVADELE 621          
BLAST of FC929266 vs. ExPASy Swiss-Prot
Match: RPK2_ARATH (LRR receptor-like serine/threonine-protein kinase RPK2 OS=Arabidopsis thaliana GN=RPK2 PE=1 SV=1)

HSP 1 Score: 156.762 bits (395), Expect = 1.295e-37
Identity = 93/235 (39.57%), Postives = 135/235 (57.45%), Query Frame = 3
Query:    3 EFLYEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALFGGENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEEEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNM--SYVPDSNCTCPLDWAFHLHRSGTLMELVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLE 701
            +F  EI  +  L+HPNLV + G      ++ LVY Y+   +L   +      +   +W V  KI L IAR LA+LH++   +++HRD+K +N+LLD D N  +SDFGLA+L    +TH +T VAGT GY+APEYA+   ++ KADVYS+GVV LE++S K  +  S+V   N    + WA  L R G   E     L       +   ++ +A++CT  S S RPTM +VV  L+
Sbjct:  914 QFHAEIKTLGRLRHPNLVTLIGYHASETEMFLVYNYLPGGNLEKFI----QERSTRDWRVLHKIALDIARALAYLHDQCVPRVLHRDVKPSNILLDDDCNAYLSDFGLARLLGTSETHATTGVAGTFGYVAPEYAMTCRVSDKADVYSYGVVLLELLSDKKALDPSFVSYGNGFNIVQWACMLLRQGRAKEFFTAGLWDAGPHDDLVEVLHLAVVCTVDSLSTRPTMKQVVRRLK 1144          
BLAST of FC929266 vs. ExPASy Swiss-Prot
Match: WAKLG_ARATH (Wall-associated receptor kinase-like 8 OS=Arabidopsis thaliana GN=WAKL8 PE=2 SV=1)

HSP 1 Score: 155.992 bits (393), Expect = 2.208e-37
Identity = 84/233 (36.05%), Postives = 135/233 (57.94%), Query Frame = 3
Query:    3 EFLYEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALFGGENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEEEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHRSGTLMELVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLE 701
            EF+ EI ++S + H N+VKI GCC+E +  +LVYE++ N +L   L    +    ++W VR  I   +A  L++LH      I HRD+K+TN+LLD     K+SDFG+++    + TH++T V GTIGY+ PEY    + T K+DVYSFGV+ +E+++G+  +S +          +     R+  L E++D R+  E ++ E   + K+A  C + +   RPTM +V   L+
Sbjct:  430 EFINEIILLSQINHRNVVKILGCCLETEVPILVYEFIPNRNLFDHLHN-PSEDFPMSWEVRLCIACEVADALSYLHSAVSIPIYHRDVKSTNILLDEKHRAKVSDFGISRSVAIDDTHLTTIVQGTIGYVDPEYLQSNHFTGKSDVYSFGVLLIELLTGEKPVSLLRRQEVRMLGAYFLEAMRNDRLHEILDARIKEECDREEVLAVAKLARRCLSLNSEHRPTMRDVFIELD 661          
BLAST of FC929266 vs. ExPASy Swiss-Prot
Match: CRI4_MAIZE (Putative receptor protein kinase CRINKLY4 OS=Zea mays GN=CR4 PE=2 SV=1)

HSP 1 Score: 155.992 bits (393), Expect = 2.208e-37
Identity = 89/236 (37.71%), Postives = 140/236 (59.32%), Query Frame = 3
Query:    3 EFLYEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALFGGE-NSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEEEK-THISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMS-YVPDSNCTCPLDWAFHLHRSGTLMELVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLE 701
            EF  E+ ++S L H +L+ + G C +G + LLVYE+M + SL   L G + N + +LNW  R  I +  ARG+ +LH  +   ++HRDIK++N+L+D D N +++DFGL+ L   +  T +S   AGT+GY+ PEY    YLT K+DVYSFGVV LEI+SG+  +     + N    ++WA  L ++G +  ++DP L    +    +++  +A  C       RP+M +V + LE
Sbjct:  547 EFHNELDLLSRLNHAHLLNLLGYCEDGSERLLVYEFMAHGSLYQHLHGKDPNLKKRLNWARRVTIAVQAARGIEYLHGYACPPVIHRDIKSSNILIDEDHNARVADFGLSILGPADSGTPLSELPAGTLGYLDPEYYRLHYLTTKSDVYSFGVVLLEILSGRKAIDMQFEEGNI---VEWAVPLIKAGDIFAILDPVLSPPSDLEALKKIASVACKCVRMRGKDRPSMDKVTTALE 779          
BLAST of FC929266 vs. ExPASy Swiss-Prot
Match: Y5392_ARATH (Probable receptor-like protein kinase At5g39020 OS=Arabidopsis thaliana GN=At5g39020 PE=2 SV=1)

HSP 1 Score: 155.221 bits (391), Expect = 3.767e-37
Identity = 89/248 (35.89%), Postives = 145/248 (58.47%), Query Frame = 3
Query:    3 EFLYEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALFGGENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEEEKTHIS-TRVAGTIGYMAPEYA--LWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPL-DWAFHLHRSGTLMELVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLEGSSNIPDVIPE 734
            +F+ E+  +S   H N+V + G C EG +  ++ E++E+ SL    F   N  L  N      I LGIARGL +LH   + +IVH DIK  N+LLD +  PK++DFGLAKL E+ ++ +S     GTIGY+APE    ++G +++K+DVYS+G++ L+++  +N +     +  T    DW +    +G    ++   +  E NK+  ++MI ++L C    PS RP M++VV M+EGS +  ++ P+
Sbjct:  535 DFINEVTSMSQTSHVNIVSLLGFCYEGSKRAIISEFLEHGSLDQ--FISRNKSLTPNVTTLYGIALGIARGLEYLHYGCKTRIVHFDIKPQNILLDDNFCPKVADFGLAKLCEKRESILSLIDTRGTIGYIAPEVVSRMYGGISHKSDVYSYGMLVLDMIGARNKVETTTCNGSTAYFPDWIYKDLENGDQTWIIGDEINEEDNKI-VKKMILVSLWCIRPCPSDRPPMNKVVEMIEGSLDALELPPK 779          
BLAST of FC929266 vs. ExPASy Swiss-Prot
Match: HSL1_ARATH (Receptor-like protein kinase HSL1 OS=Arabidopsis thaliana GN=HSL1 PE=2 SV=1)

HSP 1 Score: 155.221 bits (391), Expect = 3.767e-37
Identity = 100/252 (39.68%), Postives = 138/252 (54.76%), Query Frame = 3
Query:    6 FLYEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALFGGENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAK-LDEEEKTHISTRV-AGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHRSGTLMELVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLEGSSNIPDVIPEAGGLSED 755
            F  E+  +  ++H N+VK+  CC   D  LLVYEYM N SL   L   +   L   W  R KI L  A GL++LH +S   IVHRDIK+ N+L+D D   +++DFG+AK +D   K   S  V AG+ GY+APEYA    +  K+D+YSFGVV LEIV+ K  +   P+      + W         +  ++DP+L S F K E  +++ + LLCT+  P  RP+M  VV ML+          E GG  ED
Sbjct:  732 FEAEVETLGKIRHKNIVKLWCCCSTRDCKLLVYEYMPNGSLGDLLHSSKGGML--GWQTRFKIILDAAEGLSYLHHDSVPPIVHRDIKSNNILIDGDYGARVADFGVAKAVDLTGKAPKSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILEIVTRKRPVD--PELGEKDLVKWVCSTLDQKGIEHVIDPKLDSCF-KEEISKILNVGLLCTSPLPINRPSMRRVVKMLQ----------EIGGGDED 968          
BLAST of FC929266 vs. ExPASy Swiss-Prot
Match: HERK_ARATH (Receptor-like protein kinase HERK 1 OS=Arabidopsis thaliana GN=HERK1 PE=1 SV=1)

HSP 1 Score: 155.221 bits (391), Expect = 3.767e-37
Identity = 89/262 (33.97%), Postives = 140/262 (53.44%), Query Frame = 3
Query:    3 EFLYEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALFGGENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEE-EKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHRSGTLMELVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLEGSSNIPDVIPEAGGLSEDLRFKTLREHP 785
            EF  EI M+S  +H +LV + G C E ++++L+YEYMEN ++   L+G  +    L W  R +IC+G ARGL +LH      ++HRD+K+ N+LLD +   K++DFGL+K   E ++TH+ST V G+ GY+ PEY     LT K+DVYSFGVV  E++  +  +            +WA    + G L +++D  L          +  +    C       RP+M +V+  LE +  + + + +  G  ED     + E P
Sbjct:  525 EFRTEIEMLSQFRHRHLVSLIGYCDENNEMILIYEYMENGTVKSHLYG--SGLPSLTWKQRLEICIGAARGLHYLHTGDSKPVIHRDVKSANILLDENFMAKVADFGLSKTGPELDQTHVSTAVKGSFGYLDPEYFRRQQLTDKSDVYSFGVVLFEVLCARPVIDPTLPREMVNLAEWAMKWQKKGQLDQIIDQSLRGNIRPDSLRKFAETGEKCLADYGVDRPSMGDVLWNLEYALQLQEAVID--GEPEDNSTNMIGELP 782          
BLAST of FC929266 vs. ExPASy Swiss-Prot
Match: Y5393_ARATH (Probable receptor-like protein kinase At5g39030 OS=Arabidopsis thaliana GN=At5g39030 PE=2 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 4.920e-37
Identity = 94/250 (37.60%), Postives = 147/250 (58.80%), Query Frame = 3
Query:    3 EFLYEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALFGGENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEEEKTHISTR-VAGTIGYMAPEY--ALWGYLTYKADVYSFGVVALEIVSGKN-NMSYVPDS--NCTCPLDWAFHLHRSGTLMELVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLEGSSNIPDVIPE 734
            +F+ E+A +S   H N+V + G C EG +  +VYE++EN SL    F   N  L  +      I LGIARGL +LH   + +IVH DIK  N+LLD +L PK+SDFGLAKL E+ ++ +S     GTIGY+APE    ++G +++K+DVYSFG++ ++++  ++  +    DS  + T   DW +     G    +    +  E  ++ A++MI + L C    PS RP+M+ VV M+EGS +  ++ P+
Sbjct:  537 DFINEVASMSQTSHVNIVSLLGFCFEGSKRAIVYEFLENGSLDQ--FMSRNKSLTQDVTTLYGIALGIARGLEYLHYGCKTRIVHFDIKPQNILLDGNLCPKVSDFGLAKLCEKRESVLSLMDTRGTIGYIAPEVFSRMYGRVSHKSDVYSFGMLVIDMIGARSKEIVETVDSAASSTYFPDWIYKDLEDGEQTWIFGDEITKEEKEI-AKKMIVVGLWCIQPCPSDRPSMNRVVEMMEGSLDALEIPPK 783          
BLAST of FC929266 vs. ExPASy Swiss-Prot
Match: HSL2_ARATH (LRR receptor-like serine/threonine-protein kinase HSL2 OS=Arabidopsis thaliana GN=HSL2 PE=2 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 4.920e-37
Identity = 97/263 (36.88%), Postives = 150/263 (57.03%), Query Frame = 3
Query:    6 FLYEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALFGGENSQL--KLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAK-LDEEEKTHIS----TRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGK--NNMSYVPDSNCT-------------CPLDWAFHLHRSGT---LMELVDPRLG-SEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLEGSSNI 716
            F  E+  +  ++H N+VK+  CC   +   LVYE+MEN SL   L   +  +    L+W  R  I +G A+GL++LH +S   IVHRD+K+ N+LLD ++ P+++DFGLAK L  E+   +S    + VAG+ GY+APEY     +  K+DVYSFGVV LE+++GK  N+ S+  + +                  D A +    G    L +LVDP++  S     E E+++ +ALLCT++ P  RPTM +VV +L+   ++
Sbjct:  730 FRSEVETLGRVRHGNIVKLLMCCNGEEFRFLVYEFMENGSLGDVLHSEKEHRAVSPLDWTTRFSIAVGAAQGLSYLHHDSVPPIVHRDVKSNNILLDHEMKPRVADFGLAKPLKREDNDGVSDVSMSCVAGSYGYIAPEYGYTSKVNEKSDVYSFGVVLLELITGKRPNDSSFGENKDIVKFAMEAALCYPSPSAEDGAMNQDSLGNYRDLSKLVDPKMKLSTREYEEIEKVLDVALLCTSSFPINRPTMRKVVELLKEKKSL 992          
BLAST of FC929266 vs. ExPASy Swiss-Prot
Match: Y1684_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g06840 OS=Arabidopsis thaliana GN=At1g06840 PE=1 SV=2)

HSP 1 Score: 154.451 bits (389), Expect = 6.425e-37
Identity = 100/243 (41.15%), Postives = 141/243 (58.02%), Query Frame = 3
Query:    3 EFLYEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALFGGENSQLKLNWPV----RQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKL----DEE--EKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHRSGTLMELVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLE 701
            EFL EI ++S L H NLV + G C E  + +LVYEYMEN +L       +N  +KL  P+    R +I LG A+G+ +LH E+   I HRDIKA+N+LLD     K++DFGL++L    D E     H+ST V GT GY+ PEY L   LT K+DVYS GVV LE+ +G   +++    N    ++ A+    SG+++  VD R+ S  ++   E+   +AL C       RP+M+EVV  LE
Sbjct:  665 EFLTEIELLSRLHHRNLVSLLGFCDEEGEQMLVYEYMENGTLR------DNISVKLKEPLDFAMRLRIALGSAKGILYLHTEANPPIFHRDIKASNILLDSRFTAKVADFGLSRLAPVPDMEGISPQHVSTVVKGTPGYLDPEYFLTHQLTDKSDVYSLGVVLLELFTGMQPITH--GKNIVREINIAY---ESGSILSTVDKRMSSVPDEC-LEKFATLALRCCREETDARPSMAEVVRELE 895          
The following BLAST results are available for this feature:
BLAST of FC929266 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
WAKLO_ARATH1.295e-3737.71Wall-associated receptor kinase-like 14 OS=Arabido... [more]
RPK2_ARATH1.295e-3739.57LRR receptor-like serine/threonine-protein kinase ... [more]
WAKLG_ARATH2.208e-3736.05Wall-associated receptor kinase-like 8 OS=Arabidop... [more]
CRI4_MAIZE2.208e-3737.71Putative receptor protein kinase CRINKLY4 OS=Zea m... [more]
Y5392_ARATH3.767e-3735.89Probable receptor-like protein kinase At5g39020 OS... [more]
HSL1_ARATH3.767e-3739.68Receptor-like protein kinase HSL1 OS=Arabidopsis t... [more]
HERK_ARATH3.767e-3733.97Receptor-like protein kinase HERK 1 OS=Arabidopsis... [more]
Y5393_ARATH4.920e-3737.60Probable receptor-like protein kinase At5g39030 OS... [more]
HSL2_ARATH4.920e-3736.88LRR receptor-like serine/threonine-protein kinase ... [more]
Y1684_ARATH6.425e-3741.15Probable LRR receptor-like serine/threonine-protei... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAH2AF05RM1 PhII-IIIV1 Citrus clementina cDNA clone KN0AAH2AF05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929266 ID=FC929266; Name=FC929266; organism=Citrus clementina; type=EST; length=793bp
GTGAATTCTTATATGAGATAGCCATGATTTCGTGTTTGCAACACCCAAAT
CTTGTTAAAATTCATGGCTGTTGTGTTGAAGGGGATCAACTCTTGCTAGT
ATATGAATACATGGAAAACAACAGCCTTGCCCATGCTTTATTCGGTGGCG
AAAACAGTCAACTGAAATTGAACTGGCCAGTGAGGCAGAAGATCTGCCTT
GGGATAGCCAGAGGTTTAGCTTTTCTACATGAAGAATCCAGATTCAAAAT
AGTTCATAGAGACATCAAAGCTACGAATGTTCTGCTAGATAGAGATTTAA
ACCCCAAAATATCTGACTTTGGACTGGCTAAGCTTGATGAGGAGGAAAAA
ACTCACATCAGTACTCGAGTTGCTGGAACAATAGGATATATGGCACCAGA
GTACGCTCTATGGGGTTACTTGACCTACAAAGCAGATGTTTACAGTTTCG
GAGTTGTGGCTTTGGAAATCGTCAGTGGGAAGAATAATATGAGTTATGTG
CCAGACAGTAATTGCACCTGTCCTCTTGACTGGGCCTTCCATTTACACCG
AAGTGGTACGTTAATGGAGTTAGTGGATCCAAGGCTCGGATCAGAATTCA
ACAAGGTTGAAGCAGAGAGAATGATTAAAATAGCACTCTTATGCACCAAT
GCGTCACCTTCACTAAGGCCAACCATGTCTGAAGTGGTAAGCATGCTGGA
AGGATCTTCTAACATTCCGGATGTAATCCCTGAAGCCGGTGGTTTGAGTG
AAGACTTGAGGTTTAAAACTCTAAGAGAACATCCAAGAGAAAT
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