FC929266

Overview
NameFC929266
Unique NameFC929266
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length793
Libraries
Library NameType
PhII-IIIV1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC929266 vs. ExPASy Swiss-Prot
Match: Y4361_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At4g36180 OS=Arabidopsis thaliana GN=At4g36180 PE=1 SV=1)

HSP 1 Score: 154.066 bits (388), Expect = 8.392e-37
Identity = 100/257 (38.91%), Postives = 143/257 (55.64%), Query Frame = 3
Query:    6 FLYEIAMISCLQHPNLVKIHGCCVEGDQL-LLVYEYMENNSLAHALFGGENSQLK-LNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLD--EEEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHRSGTLMELVDP---RLGSEFNKVEAERM-IKIALLCTNASPSLRPTMSEVVSMLEGSSNIPDVIPEAGGLSE 752
            F  E  ++  ++H N+  + G       L LLVY+YM N +L+  L    +     LNWP+R  I LGIARGL FLH+ +   +VH DIK  NVL D D    ISDFGL +L      ++ ++    GT+GY++PE  L G +T ++D+YSFG+V LEI++GK  + +  D +    + W     + G + EL++P    L  E ++ E   + IK+ LLCT   P  RPTMS+VV MLEG    PDV   A   S+
Sbjct:  882 FKKEAEVLGKVKHRNITVLRGYYAGPPDLRLLVYDYMPNGNLSTLLQEASHQDGHVLNWPMRHLIALGIARGLGFLHQSN---MVHGDIKPQNVLFDADFEAHISDFGLDRLTIRSPSRSAVTANTIGTLGYVSPEATLSGEITRESDIYSFGIVLLEILTGKRPVMFTQDEDI---VKWVKKQLQRGQVTELLEPGLLELDPESSEWEEFLLGIKVGLLCTATDPLDRPTMSDVVFMLEGCRVGPDVPSSADPTSQ 1132          
BLAST of FC929266 vs. ExPASy Swiss-Prot
Match: Y4291_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At4g29180 OS=Arabidopsis thaliana GN=At4g29180 PE=2 SV=2)

HSP 1 Score: 154.066 bits (388), Expect = 8.392e-37
Identity = 86/234 (36.75%), Postives = 135/234 (57.69%), Query Frame = 3
Query:    3 EFLYEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALFGGENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKL-DEEEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHRSGTLMELVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLE 701
            EF  E  ++  + H NL    G C +G  + L+YEYM N +L   L   EN++  L+W  R  I +  A+GL +LH   R  IVHRD+K  N+LL+ +L  KI+DFGL+K+  E++ +H+ T V GT GY+ PEY     L  K+DVYSFG+V LE+++GK ++    D      + +     + G +  +VDPRL  +F+   A + +++A+ C     + RP  +++VS L+
Sbjct:  620 EFQVEAELLLTVHHRNLASFVGYCDDGRSMALIYEYMANGNLQDYL-SSENAE-DLSWEKRLHIAIDSAQGLEYLHHGCRPPIVHRDVKTANILLNDNLEAKIADFGLSKVFPEDDLSHVVTAVMGTPGYVDPEYYNTFKLNEKSDVYSFGIVLLELITGKRSIMKTDDGEKMNVVHYVEPFLKMGDIDGVVDPRLHGDFSSNSAWKFVEVAMSCVRDRGTNRPNTNQIVSDLK 851          
BLAST of FC929266 vs. ExPASy Swiss-Prot
Match: WAKLI_ARATH (Wall-associated receptor kinase-like 22 OS=Arabidopsis thaliana GN=WAKL22 PE=2 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 1.096e-36
Identity = 82/240 (34.17%), Postives = 132/240 (55.00%), Query Frame = 3
Query:    3 EFLYEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALFGGENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEEEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHRSGTLMELVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLEGSSNIPD 722
            EF+ E+ ++S + H N+VK+ GCC+E +  +LVYE++ N  L   L   ++    + W VR +I + IA  LA+LH  +   + HRD+K TN+LLD     K+SDFG ++    ++TH++T VAGT GY+ PEY      T K+DVYSFGVV +E+++G+   S +        +       +   ++++VD R+       +   + K+A  C +     RP M EV   LE   + P+
Sbjct:  461 EFINEVGVLSQINHRNIVKLMGCCLETEVPILVYEHIPNGDLFKRLHH-DSDDYTMTWDVRLRISVEIAGALAYLHSAASTPVYHRDVKTTNILLDEKYRAKVSDFGTSRSINVDQTHLTTLVAGTFGYLDPEYFQTSQFTDKSDVYSFGVVLVELITGEKPFSVMRPEENRGLVSHFNEAMKQNRVLDIVDSRIKEGCTLEQVLAVAKLARRCLSLKGKKRPNMREVSVELERIRSSPE 699          
BLAST of FC929266 vs. ExPASy Swiss-Prot
Match: KPRO_MAIZE (Putative receptor protein kinase ZmPK1 OS=Zea mays GN=PK1 PE=2 SV=2)

HSP 1 Score: 153.295 bits (386), Expect = 1.431e-36
Identity = 93/240 (38.75%), Postives = 130/240 (54.17%), Query Frame = 3
Query:    6 FLYEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALFGGENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAK-LDEEEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSN--------CTCPLDWAFHLHRSGTLMELVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSML 698
            F  E+++I  + H NLV+I G C EG   LLV EY+EN SLA+ LF  E   + L+W  R  I LG+A+GLA+LH E    ++H D+K  N+LLD+   PKI+DFGL K L+    T   + V GT+GY+APE+     +T K DVYS+GVV LE+++G      V  ++            L           +   +D +L    N V+A  +IK+A+ C     S RPTM   V  L
Sbjct:  574 FQAELSVIGRINHMNLVRIWGFCSEGSHRLLVSEYVENGSLANILFS-EGGNILLDWEGRFNIALGVAKGLAYLHHECLEWVIHCDVKPENILLDQAFEPKITDFGLVKLLNRGGSTQNVSHVRGTLGYIAPEWVSSLPITAKVDVYSYGVVLLELLTGTRVSELVGGTDEVHSMLRKLVRMLSAKLEGEEQSWIDGYLDSKLNRPVNYVQARTLIKLAVSCLEEDRSKRPTMEHAVQTL 812          
BLAST of FC929266 vs. ExPASy Swiss-Prot
Match: WAKLN_ARATH (Wall-associated receptor kinase-like 18 OS=Arabidopsis thaliana GN=WAKL18 PE=2 SV=1)

HSP 1 Score: 152.91 bits (385), Expect = 1.870e-36
Identity = 79/241 (32.78%), Postives = 139/241 (57.68%), Query Frame = 3
Query:    3 EFLYEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALFGGENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEEEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHL-HRSGTLMELVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLEGSSNIPD 722
            EF+ E+ ++S + H ++VK+ GCC+E +  +LVYE++ N +L   +   E+    + W +R +I + IA  L++LH  +   I HRDIK+TN+LLD     K++DFG ++    ++TH +T ++GT+GY+ PEY      T K+DVYSFGV+  E+++G   +  V ++     L   F +  +   L +++D R+ ++    +   + K+A+ C ++    RP M EV + LE     P+
Sbjct:  493 EFINEVVILSQINHRHVVKLLGCCLETEVPMLVYEFIINGNLFKHIHEEESDDYTMLWGMRLRIAVDIAGALSYLHSSASSPIYHRDIKSTNILLDEKYRAKVADFGTSRSVTIDQTHWTTVISGTVGYVDPEYYQSSQYTEKSDVYSFGVILAELITGDKPVIMVQNTQEIVALAEHFRVAMKEKRLTDIIDARIRNDCKPEQVMAVAKVAMKCLSSKGKKRPNMREVFTELERICTSPE 733          
BLAST of FC929266 vs. ExPASy Swiss-Prot
Match: Y1839_ARATH (Probable serine/threonine-protein kinase At1g18390 OS=Arabidopsis thaliana GN=At1g18390 PE=1 SV=2)

HSP 1 Score: 151.754 bits (382), Expect = 4.165e-36
Identity = 90/241 (37.34%), Postives = 137/241 (56.85%), Query Frame = 3
Query:    3 EFLYEIAMISCLQHPNLVKIHGCCVEGDQ-LLLVYEYMENNSLAHALFGGENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEEEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHRSGTLMELVDPRLGSEFNKVEAERMIKIALL---CTNASPSLRPTMSEVVSMLEGSSN 713
            +F  E+ +++ L+HPNLV + GC  +  + LLLVYEY+ N +LA  L G + +   L W +R KI +  A  L +LH     KI+HRD+K+ N+LLD++ N K++DFGL++L   +KTH+ST   GT GY+ P+Y L   L+ K+DVYSF VV +E++S    +            + A    ++  L ++VDP LG + +    + +I +A L   C  +   LRP MS V   L    N
Sbjct:  384 QFRNEVEILTGLRHPNLVALFGCSSKQSRDLLLVYEYVANGTLADHLHGPQANPSSLPWSIRLKIAVETASALKYLHAS---KIIHRDVKSNNILLDQNFNVKVADFGLSRLFPMDKTHVSTAPQGTPGYVDPDYHLCYQLSNKSDVYSFAVVLMELISSLPAVDITRPRQEINLSNMAVVKIQNHELRDMVDPSLGFDTDTRVRQTVIAVAELAFQCLQSDKDLRPCMSHVQDTLTRIQN 621          
BLAST of FC929266 vs. ExPASy Swiss-Prot
Match: WAKLQ_ARATH (Wall-associated receptor kinase-like 20 OS=Arabidopsis thaliana GN=WAKL20 PE=2 SV=1)

HSP 1 Score: 151.369 bits (381), Expect = 5.439e-36
Identity = 89/247 (36.03%), Postives = 138/247 (55.87%), Query Frame = 3
Query:    3 EFLYEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALFGGENSQLK-LNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDE-----EEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHRSGTLMELVDPRLGSEFNKVE---AERMIKIALLCTNASPSLRPTMSEVVSMLEGSSNI 716
            + L E+ ++  + H +LV++ GCCV+ +  LL+YE++ N +L   L G  +   K L W  R +I    A GLA+LH  ++  I HRD+K++N+LLD  LN K+SDFGL++L +       ++HI T   GT+GY+ PEY     LT K+DVYSFGVV LE+V+ K  + +  +      + +   +     L E +DP L    NK++    +++  +A  C N     RP+M EV   +E   NI
Sbjct:  403 QILNEVRILCQVNHRSLVRLLGCCVDLELPLLIYEFIPNGTLFEHLHGSSDRTWKPLTWRRRLQIAYQTAEGLAYLHSAAQPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVDLTETANNESHIFTGAQGTLGYLDPEYYRNFQLTDKSDVYSFGVVLLEMVTSKKAIDFTREEEDVNLVMYINKMMDQERLTECIDPLLKKTANKIDMQTIQQLGNLASACLNERRQNRPSMKEVADEIEYIINI 649          
BLAST of FC929266 vs. ExPASy Swiss-Prot
Match: SIRK_ARATH (Senescence-induced receptor-like serine/threonine-protein kinase OS=Arabidopsis thaliana GN=SIRK PE=2 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 9.278e-36
Identity = 92/237 (38.82%), Postives = 139/237 (58.65%), Query Frame = 3
Query:    3 EFLYEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALFGGENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAK-LDEEEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLH---RSGTLMELVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLE 701
            EF  E+ ++  + H NL  + G C E + ++L+YEYM N +L   L G  +    L+W  R KI L  A+GL +LH   +  IVHRD+K TN+LL+  L  K++DFGL++    E    IST VAG+IGY+ PEY     +  K+DVYS GVV LE+++G+  ++    S+ T  +  + H+     +G +  +VD RL   ++   A +M +IAL CT  + + RPTMS+VV  L+
Sbjct:  613 EFRAEVDLLMRVHHTNLTSLVGYCNEINHMVLIYEYMANENLGDYLAGKRS--FILSWEERLKISLDAAQGLEYLHNGCKPPIVHRDVKPTNILLNEKLQAKMADFGLSRSFSVEGSGQISTVVAGSIGYLDPEYYSTRQMNEKSDVYSLGVVLLEVITGQPAIA----SSKTEKVHISDHVRSILANGDIRGIVDQRLRERYDVGSAWKMSEIALACTEHTSAQRPTMSQVVMELK 843          
BLAST of FC929266 vs. ExPASy Swiss-Prot
Match: PAM74_ARATH (Probable LRR receptor-like serine/threonine-protein kinase PAM74 OS=Arabidopsis thaliana GN=PAM74 PE=2 SV=1)

HSP 1 Score: 150.214 bits (378), Expect = 1.212e-35
Identity = 92/235 (39.15%), Postives = 130/235 (55.32%), Query Frame = 3
Query:    6 FLYEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALFGGENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAK-LDEEEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPL-DW-AFHLHRSGTLMELVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLE 701
            F  E+ ++  + H NLV + G C E D L L+YE++    L   L G       +NW  R +I L  A GL +LH      IVHRDIK TN+LLD  L  K++DFGL++      +THIST VAGT GY+ PEY     L  K+DVYSFG+V LEI++   N   +  S     +  W  F L R G + +++DP L  ++      R++++A+ C N S   RP MS+V + L+
Sbjct:  620 FKAEVDLLLRVHHTNLVSLVGYCDERDHLALIYEFLPKGDLRQHLSGKSGGSF-INWGNRLRIALEAALGLEYLHSGCTPPIVHRDIKTTNILLDEQLKAKLADFGLSRSFPIGGETHISTVVAGTPGYLDPEYYQTTRLGEKSDVYSFGIVLLEIIT---NQPVIDQSRSKSHISQWVGFELTR-GDITKIMDPNLNGDYESRSVWRVLELAMSCANPSSVNRPNMSQVANELK 849          
BLAST of FC929266 vs. ExPASy Swiss-Prot
Match: WAKLL_ARATH (Putative wall-associated receptor kinase-like 13 OS=Arabidopsis thaliana GN=WAKL13 PE=3 SV=1)

HSP 1 Score: 149.828 bits (377), Expect = 1.583e-35
Identity = 83/241 (34.44%), Postives = 138/241 (57.26%), Query Frame = 3
Query:    3 EFLYEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALFGGENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEEEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHL-HRSGTLMELVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLEGSSNIPD 722
            EF+ E+ ++S + H ++VK+ GCC+E +  +LVYE++ N +L   L    +    L W VR +I + I+   ++LH  +   I HRDIK+TN+LLD     K+SDFG ++    + TH +T ++GT+GY+ PEY    + T K+DVYSFGVV +E+++G+  +  + ++     L   F L  R   L E++D R+ ++    +   +  +AL C   +   RP M EV + LE   + P+
Sbjct:  494 EFINEVIILSQINHRHVVKLLGCCLETEVPILVYEFIPNGNLFQHLHEEFDDYTAL-WGVRMRIAVDISGAFSYLHTAACSPIYHRDIKSTNILLDEKYRAKVSDFGTSRSVSIDHTHWTTVISGTVGYVDPEYYGSSHFTEKSDVYSFGVVLVELITGEKPVITLSETQEITGLADYFRLAMRENRLFEIIDARIRNDCKLEQVIAVANLALRCLKKTGKTRPDMREVSTALERICSAPE 733          
The following BLAST results are available for this feature:
BLAST of FC929266 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
Y4361_ARATH8.392e-3738.91Probable LRR receptor-like serine/threonine-protei... [more]
Y4291_ARATH8.392e-3736.75Probable LRR receptor-like serine/threonine-protei... [more]
WAKLI_ARATH1.096e-3634.17Wall-associated receptor kinase-like 22 OS=Arabido... [more]
KPRO_MAIZE1.431e-3638.75Putative receptor protein kinase ZmPK1 OS=Zea mays... [more]
WAKLN_ARATH1.870e-3632.78Wall-associated receptor kinase-like 18 OS=Arabido... [more]
Y1839_ARATH4.165e-3637.34Probable serine/threonine-protein kinase At1g18390... [more]
WAKLQ_ARATH5.439e-3636.03Wall-associated receptor kinase-like 20 OS=Arabido... [more]
SIRK_ARATH9.278e-3638.82Senescence-induced receptor-like serine/threonine-... [more]
PAM74_ARATH1.212e-3539.15Probable LRR receptor-like serine/threonine-protei... [more]
WAKLL_ARATH1.583e-3534.44Putative wall-associated receptor kinase-like 13 O... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAH2AF05RM1 PhII-IIIV1 Citrus clementina cDNA clone KN0AAH2AF05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929266 ID=FC929266; Name=FC929266; organism=Citrus clementina; type=EST; length=793bp
GTGAATTCTTATATGAGATAGCCATGATTTCGTGTTTGCAACACCCAAAT
CTTGTTAAAATTCATGGCTGTTGTGTTGAAGGGGATCAACTCTTGCTAGT
ATATGAATACATGGAAAACAACAGCCTTGCCCATGCTTTATTCGGTGGCG
AAAACAGTCAACTGAAATTGAACTGGCCAGTGAGGCAGAAGATCTGCCTT
GGGATAGCCAGAGGTTTAGCTTTTCTACATGAAGAATCCAGATTCAAAAT
AGTTCATAGAGACATCAAAGCTACGAATGTTCTGCTAGATAGAGATTTAA
ACCCCAAAATATCTGACTTTGGACTGGCTAAGCTTGATGAGGAGGAAAAA
ACTCACATCAGTACTCGAGTTGCTGGAACAATAGGATATATGGCACCAGA
GTACGCTCTATGGGGTTACTTGACCTACAAAGCAGATGTTTACAGTTTCG
GAGTTGTGGCTTTGGAAATCGTCAGTGGGAAGAATAATATGAGTTATGTG
CCAGACAGTAATTGCACCTGTCCTCTTGACTGGGCCTTCCATTTACACCG
AAGTGGTACGTTAATGGAGTTAGTGGATCCAAGGCTCGGATCAGAATTCA
ACAAGGTTGAAGCAGAGAGAATGATTAAAATAGCACTCTTATGCACCAAT
GCGTCACCTTCACTAAGGCCAACCATGTCTGAAGTGGTAAGCATGCTGGA
AGGATCTTCTAACATTCCGGATGTAATCCCTGAAGCCGGTGGTTTGAGTG
AAGACTTGAGGTTTAAAACTCTAAGAGAACATCCAAGAGAAAT
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