FC929266

Overview
NameFC929266
Unique NameFC929266
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length793
Libraries
Library NameType
PhII-IIIV1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC929266 vs. ExPASy Swiss-Prot
Match: Y1756_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g07560 OS=Arabidopsis thaliana GN=At1g07560 PE=2 SV=1)

HSP 1 Score: 149.443 bits (376), Expect = 2.067e-35
Identity = 89/236 (37.71%), Postives = 132/236 (55.93%), Query Frame = 3
Query:    3 EFLYEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALFGGENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAK-LDEEEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCP--LDWAFHLHRSGTLMELVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLE 701
            EF  E+ ++  + H NLV + G C E D L L+Y+YM N  L     G       ++W  R  I +  A GL +LH   +  IVHRD+K++N+LLD  L  K++DFGL++     +++H+ST VAGT GY+  EY     L+ K+DVYSFGVV LEI++ K     V D N   P   +W   +   G +  ++DP+L   ++   A + +++A+ C N S   RP MS VV  L+
Sbjct:  610 EFKTEVELLLRVYHTNLVSLVGYCDEKDHLALIYQYMVNGDLKKHFSGSSI----ISWVDRLNIAVDAASGLEYLHIGCKPLIVHRDVKSSNILLDDQLQAKLADFGLSRSFPIGDESHVSTLVAGTFGYLDHEYYQTNRLSEKSDVYSFGVVLLEIITNKP----VIDHNRDMPHIAEWVKLMLTRGDISNIMDPKLQGVYDSGSAWKALELAMTCVNPSSLKRPNMSHVVHELK 837          
BLAST of FC929266 vs. ExPASy Swiss-Prot
Match: WAKLP_ARATH (Wall-associated receptor kinase-like 15 OS=Arabidopsis thaliana GN=WAKL15 PE=2 SV=2)

HSP 1 Score: 149.443 bits (376), Expect = 2.067e-35
Identity = 83/240 (34.58%), Postives = 140/240 (58.33%), Query Frame = 3
Query:    3 EFLYEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALFGGENSQLKL--NWPVRQKICLG--IARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEEEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHRSGTLMELVDPRLGSEFNKVEAERMIK---IALLCTNASPSLRPTMSEVVSMLE 701
            + + E+ ++  + H NLVK+ GCC+E +  +LVYE++ N +L   ++GG      L  + P+R+++ +    A+GL +LH  S   I HRD+K++N+LLD +L+ K++DFGL++L   + +H++T   GT+GY+ PEY L   LT K+DVYSFGVV  E+++ K  + +  +      + +     + G LM+++DP +G    + E E M     +A LC   +   RPTM      +E
Sbjct:  394 QIVNEVQILCQVSHKNLVKLLGCCIELEMPVLVYEFVPNGTLFEHIYGGGGGGGGLYDHLPLRRRLMIAHQTAQGLDYLHSSSSPPIYHRDVKSSNILLDENLDVKVADFGLSRLGVSDVSHVTTCAQGTLGYLDPEYYLNFQLTDKSDVYSFGVVLFELLTCKKAIDFNREEEDVNLVVFVRKALKEGRLMDVIDPVIGIGATEKEIESMKALGVLAELCVKETRQCRPTMQVAAKEIE 633          
BLAST of FC929266 vs. ExPASy Swiss-Prot
Match: Y1571_ARATH (Probable leucine-rich repeat receptor-like protein kinase At1g35710 OS=Arabidopsis thaliana GN=At1g35710 PE=2 SV=1)

HSP 1 Score: 149.058 bits (375), Expect = 2.700e-35
Identity = 91/228 (39.91%), Postives = 135/228 (59.21%), Query Frame = 3
Query:    3 EFLYEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALFGGENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEEEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHRSGTLMELVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEV 686
            EFL E+  ++ ++H N+VK+ G C       L+YEYME  SL   L   E ++ +L W  R  +  G+A  L+++H +    IVHRDI + N+LLD D   KISDFG AKL + + ++ S  VAGT GY+APE+A    +T K DVYSFGV+ LE++ GK+    V  S+ +     A  L RS +   +++PR     N+ +  +M+++ALLC  A+P  RPTM  +
Sbjct:  896 EFLNEVKALTEIRHRNVVKLFGFCSHRRHTFLIYEYMEKGSLNKLLANDEEAK-RLTWTKRINVVKGVAHALSYMHHDRITPIVHRDISSGNILLDNDYTAKISDFGTAKLLKTDSSNWSA-VAGTYGYVAPEFAYTMKVTEKCDVYSFGVLILELIIGKHPGDLV--SSLSSSPGEALSL-RSISDERVLEPR---GQNREKLLKMVEMALLCLQANPESRPTMLSI 1115          
BLAST of FC929266 vs. ExPASy Swiss-Prot
Match: SRF3_ARATH (Protein STRUBBELIG-RECEPTOR FAMILY 3 OS=Arabidopsis thaliana GN=SRF3 PE=1 SV=1)

HSP 1 Score: 149.058 bits (375), Expect = 2.700e-35
Identity = 92/236 (38.98%), Postives = 129/236 (54.66%), Query Frame = 3
Query:    3 EFLYEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALFGGENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKL-DEEEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNC--TCPLDWAF-HLHRSGTLMELVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSML 698
            EF+  +  I  ++H N+V++ G C E DQ LLVYEY  N +L   L   +  + KL+W  R  + LG AR L +LHE     I+HR+ K+ NVLLD DL+  +SD GLA L      + +S ++    GY APE+   G  T+++DVYSFGVV LE+++G+  MSY  D +      + WA   LH    L ++VDP L  ++          I   C  + P  RP MSEVV  L
Sbjct:  527 EFIELVNNIDMIRHSNIVELVGYCAEHDQRLLVYEYCSNGTLQDGLHSDDEFKKKLSWNTRVSMALGAARALEYLHEVCEPPIIHRNFKSANVLLDDDLSVLVSDCGLAPLISSGSVSQLSGQLLAAYGYGAPEFDS-GIYTWQSDVYSFGVVMLELLTGR--MSYDRDRSRGEQFLVRWAIPQLHDIDALGKMVDPSLNGQYPAKSLSHFADIISRCVQSEPEFRPLMSEVVQDL 759          
BLAST of FC929266 vs. ExPASy Swiss-Prot
Match: ACR4_ARATH (Serine/threonine-protein kinase-like protein ACR4 OS=Arabidopsis thaliana GN=ACR4 PE=1 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 4.605e-35
Identity = 88/237 (37.13%), Postives = 140/237 (59.07%), Query Frame = 3
Query:    3 EFLYEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALFGGENSQLK--LNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDE-EEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMS-YVPDSNCTCPLDWAFHLHRSGTLMELVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLE 701
            EF  E+ ++S L H +L+ + G C E  + LLVYE+M + SL H    G+N  LK  L+W  R  I +  ARG+ +LH  +   ++HRDIK++N+L+D + N +++DFGL+ L   +  + ++   AGT+GY+ PEY    YLT K+DVYSFGV+ LEI+SG+  +  +  + N    ++WA  L ++G +  L+DP L         +R++ +A  C       RP+M +V + LE
Sbjct:  554 EFRTELDLLSRLNHAHLLSLLGYCEECGERLLVYEFMAHGSL-HNHLHGKNKALKEQLDWVKRVTIAVQAARGIEYLHGYACPPVIHRDIKSSNILIDEEHNARVADFGLSLLGPVDSGSPLAELPAGTLGYLDPEYYRLHYLTTKSDVYSFGVLLLEILSGRKAIDMHYEEGNI---VEWAVPLIKAGDINALLDPVLKHPSEIEALKRIVSVACKCVRMRGKDRPSMDKVTTALE 786          
BLAST of FC929266 vs. ExPASy Swiss-Prot
Match: WAKLR_ARATH (Wall-associated receptor kinase-like 21 OS=Arabidopsis thaliana GN=WAKL21 PE=1 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 6.014e-35
Identity = 88/234 (37.61%), Postives = 128/234 (54.70%), Query Frame = 3
Query:   15 EIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALFGGENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKL---DEEEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHRSGTLMELVDPRLGSEFNK---VEAERMIKIALLCTNASPSLRPTMSEVVSML 698
            EI ++S + HPNLV++ GCC    +  LVYE+M N +L   L   E  Q  L+W +R  I    A  +A LH      I HRDIK++N+LLD + N KISDFGL++L    + E +HIST   GT GY+ P+Y     L+ K+DVYSFGVV +EI+SG   + +    +       A      G +++++DP L  E N         + ++A  C +   ++RPTM E+   L
Sbjct:  356 EIKLLSSVSHPNLVRLLGCCFADGEPFLVYEFMPNGTLYQHL-QHERGQPPLSWQLRLAIACQTANAIAHLHSSVNPPIYHRDIKSSNILLDHEFNSKISDFGLSRLGMSTDFEASHISTAPQGTPGYLDPQYHQDFQLSDKSDVYSFGVVLVEIISGFKVIDFTRPYSEVNLASLAVDRIGRGRVVDIIDPCLNKEINPKMFASIHNLAELAFRCLSFHRNMRPTMVEITEDL 588          
BLAST of FC929266 vs. ExPASy Swiss-Prot
Match: ACCR3_ARATH (Putative serine/threonine-protein kinase-like protein CCR3 OS=Arabidopsis thaliana GN=CCR3 PE=2 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 1.026e-34
Identity = 93/247 (37.65%), Postives = 140/247 (56.68%), Query Frame = 3
Query:   15 EIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALFGGEN----SQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKL-----DEEEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGK-----NNMSYVPDSNCTCP--LDWAFHLHRSGTLMELVDPRLGS-EFNKVEAERMIK-IALLCTNASPSLRPTMSEVVSMLE 701
            EIA +S L H +LV++ G C E ++ LLVY+YM+N +L   L    N    S L  +W +R KI L  ARG+ +LH  +   I+HRDIK++N+LLD +   ++SDFGL+ +      +       T+ AGT+GY+ PEY     LT K+DVY  GVV LE+++GK     NN     +  C     +D++     +  L  ++DPR+GS E  + +A  ++   A+ C NA    RPTM+++V  LE
Sbjct:  545 EIAFLSRLHHKHLVRLVGYCEEREEKLLVYDYMKNGALYDHLHDKNNVEKHSSLINSWKMRIKIALDAARGIEYLHNYAVPPIIHRDIKSSNILLDSNWVARVSDFGLSLMGPVLGKDHNPYQRPTKAAGTVGYIDPEYYSLNVLTDKSDVYGLGVVLLELLTGKRAIFRNNGDVEEEEGCVPVHLVDYSVPAITADELSTILDPRVGSPELGEGDAVELVAYTAMHCVNAEGRNRPTMTDIVGNLE 791          
BLAST of FC929266 vs. ExPASy Swiss-Prot
Match: Y5169_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g16900 OS=Arabidopsis thaliana GN=At5g16900 PE=2 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 1.340e-34
Identity = 85/234 (36.32%), Postives = 128/234 (54.70%), Query Frame = 3
Query:    3 EFLYEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALFGGENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAK-LDEEEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHRSGTLMELVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLE 701
            EF  E+ ++  + H NLV + G C E   L L+YEYM N  L   L  G++    L W  R  I +  A GL +LH   +  +VHRD+K+ N+LLD     K++DFGL++     E++H+ST V GT GY+ PEY     LT K+DVYSFG+V LEI++ +  +    ++      +    +     +  +VDP L  E++     + +K+A+ C + SP  RP MS VV  L+
Sbjct:  613 EFKAEVELLLRVHHINLVSLVGYCDEQAHLALIYEYMANGDLKSHL-SGKHGDCVLKWENRLSIAVETALGLEYLHSGCKPLMVHRDVKSMNILLDEHFQAKLADFGLSRSFSVGEESHVSTGVVGTPGYLDPEYYRTYRLTEKSDVYSFGIVLLEIITNQPVLEQANENRHIA--ERVRTMLTRSDISTIVDPNLIGEYDSGSVRKALKLAMSCVDPSPVARPDMSHVVQELK 843          
BLAST of FC929266 vs. ExPASy Swiss-Prot
Match: Y4885_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At4g08850 OS=Arabidopsis thaliana GN=At4g08850 PE=1 SV=3)

HSP 1 Score: 146.747 bits (369), Expect = 1.340e-34
Identity = 88/230 (38.26%), Postives = 131/230 (56.96%), Query Frame = 3
Query:    3 EFLYEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALFGGENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEEEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHRSGTLMELVDPRLGSEFNKVEAE--RMIKIALLCTNASPSLRPTMSEV 686
            EFL EI  ++ ++H N+VK+ G C       LVYEYME  SL   L   + ++ KL+W  R  +  G+A  L+++H +    IVHRDI + N+LL  D   KISDFG AKL + + ++ S  VAGT GY+APE A    +T K DVYSFGV+ LE++ G++    V   + + P         + +L  + D RL     +++ E   ++K+ALLC ++ P  RPTM  +
Sbjct:  820 EFLNEIRALTEIRHRNVVKLFGFCSHRRNTFLVYEYMERGSLRKVLENDDEAK-KLDWGKRINVVKGVAHALSYMHHDRSPAIVHRDISSGNILLGEDYEAKISDFGTAKLLKPDSSNWSA-VAGTYGYVAPELAYAMKVTEKCDVYSFGVLTLEVIKGEHPGDLVSTLSSSPP-------DATLSLKSISDHRLPEPTPEIKEEVLEILKVALLCLHSDPQARPTMLSI 1040          
BLAST of FC929266 vs. ExPASy Swiss-Prot
Match: WAKLM_ARATH (Wall-associated receptor kinase-like 17 OS=Arabidopsis thaliana GN=WAKL17 PE=2 SV=2)

HSP 1 Score: 146.747 bits (369), Expect = 1.340e-34
Identity = 78/241 (32.37%), Postives = 136/241 (56.43%), Query Frame = 3
Query:    3 EFLYEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALFGGENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEEEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHL-HRSGTLMELVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLEGSSNIPD 722
            EF+ E+ ++S + H ++VK+ GCC+E +  +LVYE++ N +L   +   E     + W +R +I + IA  L++LH  +   I HRDIK+TN+LLD     K++DFG ++    ++TH +T ++GT+GY+ PEY      T K+DVYSFGV+  E+++G   +  V ++     L   F +  +   L +++D R+  +    +   +  +A+ C ++    RP M EV + LE     P+
Sbjct:  484 EFINEVVILSQINHRHVVKLLGCCLETEVPILVYEFIINGNLFKHIHEEEADDYTMIWGMRLRIAVDIAGALSYLHSAASSPIYHRDIKSTNILLDEKYRAKVADFGTSRSVTIDQTHWTTVISGTVGYVDPEYYRSSQYTEKSDVYSFGVILAELITGDKPVIMVQNTQEIIALAEHFRVAMKERRLSDIMDARIRDDSKPEQVMAVANLAMKCLSSRGRNRPNMREVFTELERICTSPE 724          
The following BLAST results are available for this feature:
BLAST of FC929266 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
Y1756_ARATH2.067e-3537.71Probable LRR receptor-like serine/threonine-protei... [more]
WAKLP_ARATH2.067e-3534.58Wall-associated receptor kinase-like 15 OS=Arabido... [more]
Y1571_ARATH2.700e-3539.91Probable leucine-rich repeat receptor-like protein... [more]
SRF3_ARATH2.700e-3538.98Protein STRUBBELIG-RECEPTOR FAMILY 3 OS=Arabidopsi... [more]
ACR4_ARATH4.605e-3537.13Serine/threonine-protein kinase-like protein ACR4 ... [more]
WAKLR_ARATH6.014e-3537.61Wall-associated receptor kinase-like 21 OS=Arabido... [more]
ACCR3_ARATH1.026e-3437.65Putative serine/threonine-protein kinase-like prot... [more]
Y5169_ARATH1.340e-3436.32Probable LRR receptor-like serine/threonine-protei... [more]
Y4885_ARATH1.340e-3438.26Probable LRR receptor-like serine/threonine-protei... [more]
WAKLM_ARATH1.340e-3432.37Wall-associated receptor kinase-like 17 OS=Arabido... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAH2AF05RM1 PhII-IIIV1 Citrus clementina cDNA clone KN0AAH2AF05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929266 ID=FC929266; Name=FC929266; organism=Citrus clementina; type=EST; length=793bp
GTGAATTCTTATATGAGATAGCCATGATTTCGTGTTTGCAACACCCAAAT
CTTGTTAAAATTCATGGCTGTTGTGTTGAAGGGGATCAACTCTTGCTAGT
ATATGAATACATGGAAAACAACAGCCTTGCCCATGCTTTATTCGGTGGCG
AAAACAGTCAACTGAAATTGAACTGGCCAGTGAGGCAGAAGATCTGCCTT
GGGATAGCCAGAGGTTTAGCTTTTCTACATGAAGAATCCAGATTCAAAAT
AGTTCATAGAGACATCAAAGCTACGAATGTTCTGCTAGATAGAGATTTAA
ACCCCAAAATATCTGACTTTGGACTGGCTAAGCTTGATGAGGAGGAAAAA
ACTCACATCAGTACTCGAGTTGCTGGAACAATAGGATATATGGCACCAGA
GTACGCTCTATGGGGTTACTTGACCTACAAAGCAGATGTTTACAGTTTCG
GAGTTGTGGCTTTGGAAATCGTCAGTGGGAAGAATAATATGAGTTATGTG
CCAGACAGTAATTGCACCTGTCCTCTTGACTGGGCCTTCCATTTACACCG
AAGTGGTACGTTAATGGAGTTAGTGGATCCAAGGCTCGGATCAGAATTCA
ACAAGGTTGAAGCAGAGAGAATGATTAAAATAGCACTCTTATGCACCAAT
GCGTCACCTTCACTAAGGCCAACCATGTCTGAAGTGGTAAGCATGCTGGA
AGGATCTTCTAACATTCCGGATGTAATCCCTGAAGCCGGTGGTTTGAGTG
AAGACTTGAGGTTTAAAACTCTAAGAGAACATCCAAGAGAAAT
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