FC929266

Overview
NameFC929266
Unique NameFC929266
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length793
Libraries
Library NameType
PhII-IIIV1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC929266 vs. ExPASy Swiss-Prot
Match: ACCR4_ARATH (Serine/threonine-protein kinase-like protein CCR4 OS=Arabidopsis thaliana GN=CCR4 PE=1 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 1.134e-33
Identity = 91/241 (37.76%), Postives = 135/241 (56.02%), Query Frame = 3
Query:    6 FLYEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALFGGENSQLK-LNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKL---DEEEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHRSGTLMELVDPRLGSEFNKVEAERMIKIALL---CTNASPSLRPTMSEVVSMLEGS 707
            F+ E+  +S L H NLV++ G   + ++ +LVYEYM+N SLA  L    N Q   L+W  R  I L  ARG+ +LHE     ++HRDIK++N+LLD     K+SDFGL+++   +E++ +H+S   AGT+GY+ PEY  +  LT K+DVYSFGVV LE++SG   +    D N    +++            ++D R+       E E +  +  L   C       RP+M EVVS LE +
Sbjct:  496 FVNELESMSRLNHKNLVRLLGFYEDTEERILVYEYMKNGSLADHL---HNPQFDPLSWQTRLMIALDAARGIQYLHEFIVPPVIHRDIKSSNILLDATWTAKVSDFGLSQMGPTEEDDVSHLSLHAAGTLGYIDPEYYKFQQLTTKSDVYSFGVVLLELLSGHKAIHNNEDENPRNLVEYVVPYILLDEAHRILDQRIPPP-TPYEIEAVAHVGYLAAECLMPCSRKRPSMVEVVSKLESA 732          
BLAST of FC929266 vs. ExPASy Swiss-Prot
Match: SRF7_ARATH (Protein STRUBBELIG-RECEPTOR FAMILY 7 OS=Arabidopsis thaliana GN=SRF7 PE=1 SV=1)

HSP 1 Score: 143.28 bits (360), Expect = 1.481e-33
Identity = 88/233 (37.77%), Postives = 119/233 (51.07%), Query Frame = 3
Query:    3 EFLYEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALFGGENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEEEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAF-HLHRSGTLMELVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSML 698
            +F   ++ I+ L H N+ K+ G C E  Q L+VYE+  N SL   L   E     L W  R KI LG AR L +LHE     IVH++IK+ N+LLD +LNP +SD GLA         ++       GY APE ++ G  + K+DVYSFGVV LE+++G+         +    + WA   LH    L ++VDP L   +      R   +  LC    P  RP MSEVV  L
Sbjct:  461 DFTEIVSKIAHLDHENVTKLDGYCSEHGQHLVVYEFHRNGSLHDFLHLAEEESKPLIWNPRVKIALGTARALEYLHEVCSPSIVHKNIKSANILLDSELNPHLSDSGLASFLPTANELLN---QNDEGYSAPETSMSGQYSLKSDVYSFGVVMLELLTGRKPFDSTRSRSEQSLVRWATPQLHDIDALGKMVDPALKGLYPVKSLSRFADVIALCVQPEPEFRPPMSEVVQAL 690          
BLAST of FC929266 vs. ExPASy Swiss-Prot
Match: Y5838_ARATH (Probably inactive leucine-rich repeat receptor-like protein kinase At5g48380 OS=Arabidopsis thaliana GN=At5g48380 PE=1 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 2.527e-33
Identity = 93/245 (37.96%), Postives = 127/245 (51.84%), Query Frame = 3
Query:    3 EFLYEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALFGGENSQLK-LNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEEEKTHISTRV---AGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCP--------LDWAFHLHRSGTLMELVDPRLGSEFNKVEAERMIKIALLCTNAS-PSLRPTMSEVVSML 698
            EF  E+  +  +++ NLV + G CV   + LL+YEYM N  L   L   +    K L+WP R KI +G A+GLA+LH     +I+HR+I +  +LL  +  PKISDFGLA+L     TH+ST V    G  GY+APEY+     T K DVYSFGVV LE+V+G+   S    S             ++W   L     L E +D  L       E  +++K+A  C        RPTM EV  +L
Sbjct:  342 EFDAEMKTLGSVKNRNLVPLLGYCVANKERLLMYEYMANGYLYDQLHPADEESFKPLDWPSRLKIAIGTAKGLAWLHHSCNPRIIHRNISSKCILLTAEFEPKISDFGLARLMNPIDTHLSTFVNGEFGDFGYVAPEYSRTMVATPKGDVYSFGVVLLELVTGQKATSVTKVSEEKAEEENFKGNLVEWITKLSSESKLQEAIDRSLLGNGVDDEIFKVLKVACNCVLPEIAKQRPTMFEVYQLL 586          
BLAST of FC929266 vs. ExPASy Swiss-Prot
Match: WAKLK_ARATH (Putative wall-associated receptor kinase-like 11 OS=Arabidopsis thaliana GN=WAKL11 PE=3 SV=2)

HSP 1 Score: 141.739 bits (356), Expect = 4.310e-33
Identity = 80/234 (34.19%), Postives = 131/234 (55.98%), Query Frame = 3
Query:    3 EFLYEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALFGGENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEEEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHL-HRSGTLMELVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLE 701
            EF+ E+ ++S + H ++VK+ GCC+E +   LVYE++ N +L   +    +   K  W +R +I + IA  L++LH  +   I HRDIK+TN+LLD     K+SDFG ++    + TH +T ++GT+GY+ PEY      T K+DVYSFGVV +E+++G+  +  V +S     L   F +  +     E++D R+       +   +  +A  C N+    RP M +V + LE
Sbjct:  491 EFINEVVILSQINHRHVVKLLGCCLETEVPTLVYEFIPNGNLFQHIHEESDDYTK-TWGMRLRIAVDIAGALSYLHSAASSPIYHRDIKSTNILLDEKYRTKVSDFGTSRSVTIDHTHWTTVISGTVGYVDPEYYGSSQYTDKSDVYSFGVVLVELITGEKPVITVSNSQEIRGLADHFRVAMKENRFFEIMDARIRDGCKPEQVMAVANLARRCLNSKGKKRPCMRKVFTDLE 723          
BLAST of FC929266 vs. ExPASy Swiss-Prot
Match: IRAK4_BOVIN (Interleukin-1 receptor-associated kinase 4 OS=Bos taurus GN=IRAK4 PE=2 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 5.629e-33
Identity = 89/234 (38.03%), Postives = 133/234 (56.84%), Query Frame = 3
Query:    3 EFLYEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALFGGENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEE-EKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHRSGTLMELVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLE 701
            +F  EI +++  QH NLV++ G   +GD L LVY YM N SL   L   + +   L+W +R KI  G A GL++LHE      +HRDIK+ N+LLD D   KISDFGLA+  E+  +T +++R+ GT  YMAPE AL G +T K+D+YSFGVV LEI++G   +    +      +          T+ + VD ++ ++ +    E M  +A  C +   + RP + +V  +LE
Sbjct:  230 QFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTP-PLSWNMRCKIAQGAANGLSYLHENHH---IHRDIKSANILLDEDFTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKEEIE-DEEKTIEDYVDRKM-NDIDSTSIETMYSVASQCLHEKKNKRPDIKKVQQLLE 456          
BLAST of FC929266 vs. ExPASy Swiss-Prot
Match: Y1124_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g12460 OS=Arabidopsis thaliana GN=At1g12460 PE=1 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 1.638e-32
Identity = 89/246 (36.18%), Postives = 135/246 (54.88%), Query Frame = 3
Query:    3 EFLYEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHAL----FGGENSQL---KLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAK-LDEEEKTHISTRVAGTIGYMAPEYALWGY-LTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHRSGTLMELVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLEGSSN 713
            EF  EI  +  LQHPNL    G        L++ E++ N SL   L    F G +S      LNW  R +I LG A+ L+FLH + +  I+H ++K+TN+LLD     K+SD+GL K L   +   ++ +    +GY+APE A      + K DVYS+GVV LE+V+G+  +    ++      D+   L  +G+  +  D RL  EF + E  +++K+ LLCT+ +P  RP+M+EVV +LE   N
Sbjct:  634 EFEQEIGRLGGLQHPNLSSFQGYYFSSTMQLILSEFVPNGSLYDNLHLRIFPGTSSSYGNTDLNWHRRFQIALGTAKALSFLHNDCKPAILHLNVKSTNILLDERYEAKLSDYGLEKFLPVMDSFGLTKKFHNAVGYIAPELAQQSLRASEKCDVYSYGVVLLELVTGRKPVESPSENQVLILRDYVRDLLETGSASDCFDRRL-REFEENELIQVMKLGLLCTSENPLKRPSMAEVVQVLESIRN 878          
BLAST of FC929266 vs. ExPASy Swiss-Prot
Match: Y1719_ARATH (Probable inactive receptor kinase At1g27190 OS=Arabidopsis thaliana GN=At1g27190 PE=1 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 6.224e-32
Identity = 81/242 (33.47%), Postives = 132/242 (54.55%), Query Frame = 3
Query:    3 EFLYEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALFGGENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKL---DEEEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYV--PDSNCTCPLDWAFHLHRSGTLMELVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLEGSSN 713
            +F  E+  +  L+HPNLV + G CV  D+ LLVY++M N +L   L  G      L+WP R+ I +G A+GLA+LH   +   +H+ I +  +LLD D + +I+D+GLAKL    +   +  +    G +GY+APEY+     + K DVY FG+V LE+V+G+  +S +   +      +DW      +G   + +D  +  + +  E  + +KIA  C  + P  RPTM +V   L+  ++
Sbjct:  340 QFRSEMNKLGELRHPNLVPLLGYCVVEDERLLVYKHMVNGTLFSQLHNGGLCDAVLDWPTRRAIGVGAAKGLAWLHHGCQPPYLHQFISSNVILLDDDFDARITDYGLAKLVGSRDSNDSSFNNGDLGELGYVAPEYSSTMVASLKGDVYGFGIVLLELVTGQKPLSVINGVEGFKGSLVDWVSQYLGTGRSKDAIDRSICDKGHDEEILQFLKIACSCVVSRPKERPTMIQVYESLKNMAD 581          
BLAST of FC929266 vs. ExPASy Swiss-Prot
Match: SRF1_ARATH (Protein STRUBBELIG-RECEPTOR FAMILY 1 OS=Arabidopsis thaliana GN=SRF1 PE=2 SV=2)

HSP 1 Score: 137.887 bits (346), Expect = 6.224e-32
Identity = 82/234 (35.04%), Postives = 124/234 (52.99%), Query Frame = 3
Query:    3 EFLYEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALFGGENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKL-DEEEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAF-HLHRSGTLMELVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSML 698
            +FL  +  I  ++H N+V++ G C E  Q LL++EY  N +L   L   +  +++L+W VR +I L  A+ L +LHE      +HR+ K+ N+LLD D+   +SD GLA L      + +S ++    GY APE+  +G  T K DVYSFGVV LE+++G+ +     D      + WA   LH    L ++VDP L  ++          +   C  + P  RP MSEVV  L
Sbjct:  520 KFLELVNNIDRIRHANIVQLVGFCSEHSQRLLIHEYCRNGTLHDLLHIDDRLKIELSWNVRVRIALEAAKALEYLHEICDPPSIHRNFKSANILLDDDIRVHVSDCGLAPLISSGAVSQLSGQLLAAYGYGAPEFE-YGIYTMKCDVYSFGVVMLELLTGRKSYDKKRDRGEQFLVRWAIPQLHDIDALAKMVDPSLKGDYPAKSLSHFADVISRCVQSEPEYRPLMSEVVQDL 752          
BLAST of FC929266 vs. ExPASy Swiss-Prot
Match: SRF4_ARATH (Protein STRUBBELIG-RECEPTOR FAMILY 4 OS=Arabidopsis thaliana GN=SRF4 PE=2 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 8.128e-32
Identity = 81/234 (34.62%), Postives = 121/234 (51.71%), Query Frame = 3
Query:    3 EFLYEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALFGGENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEEEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAF-HLHRSGTLMELVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLE 701
            EF + ++ IS + H N+ ++ G C E  + +LVYEY  + SL   L   ++    L W  R +I LG A+ + +LHE     +VH++IK++N+LLD +LNP++SD+GLA        ++       +GY APE       T K+DVYSFGVV LE+++G+              + WA   L    TL E+VDP L   +          I  +C    P LRP +S VV  L+
Sbjct:  457 EFSHIVSSISSIHHKNMAELVGYCSEQGRNMLVYEYFTSGSLHRFLHLSDDFSKPLTWNTRIRIALGTAKAIEYLHETCSPPLVHKNIKSSNILLDNELNPRLSDYGLANFHHRTSQNLG------VGYNAPECTDPSAYTQKSDVYSFGVVMLELLTGRKPYDSGRPKAEQSLVRWAKPQLKDMDTLDEMVDPALCGLYAPESVSSFADIVSICVMTEPGLRPPVSNVVEALK 684          
BLAST of FC929266 vs. ExPASy Swiss-Prot
Match: GSO2_ARATH (LRR receptor-like serine/threonine-protein kinase GSO2 OS=Arabidopsis thaliana GN=GSO2 PE=2 SV=2)

HSP 1 Score: 137.502 bits (345), Expect = 8.128e-32
Identity = 91/244 (37.30%), Postives = 136/244 (55.74%), Query Frame = 3
Query:    6 FLYEIAMISCLQHPNLVKIHG-CCVEGDQL-LLVYEYMENNSLAHALFGGENSQLK--LNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKL---DEEEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHRSGTLMELVDPRLGSEFNKV------EAERMIKIALLCTNASPSLRPTMSEVVSML 698
            F  E+  +  ++H +LVK+ G C  + D L LL+YEYM N S+   L   EN++ K  L W  R KI LG+A+G+ +LH +    IVHRDIK++NVLLD ++   + DFGLAK+   + +  T  +T  AG+ GY+APEYA     T K+DVYS G+V +EIV+GK     + D   T  + W   +  +    E  +  + SE   +       A ++++IAL CT + P  RP+  +    L
Sbjct:  990 FNREVKTLGTIRHRHLVKLMGYCSSKADGLNLLIYEYMANGSVWDWLHANENTKKKEVLGWETRLKIALGLAQGVEYLHYDCVPPIVHRDIKSSNVLLDSNIEAHLGDFGLAKILTGNYDTNTESNTMFAGSYGYIAPEYAYSLKATEKSDVYSMGIVLMEIVTGKMPTEAMFDEE-TDMVRWVETVLDTPPGSEAREKLIDSELKSLLPCEEEAAYQVLEIALQCTKSYPQERPSSRQASEYL 1232          
The following BLAST results are available for this feature:
BLAST of FC929266 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
ACCR4_ARATH1.134e-3337.76Serine/threonine-protein kinase-like protein CCR4 ... [more]
SRF7_ARATH1.481e-3337.77Protein STRUBBELIG-RECEPTOR FAMILY 7 OS=Arabidopsi... [more]
Y5838_ARATH2.527e-3337.96Probably inactive leucine-rich repeat receptor-lik... [more]
WAKLK_ARATH4.310e-3334.19Putative wall-associated receptor kinase-like 11 O... [more]
IRAK4_BOVIN5.629e-3338.03Interleukin-1 receptor-associated kinase 4 OS=Bos ... [more]
Y1124_ARATH1.638e-3236.18Probable LRR receptor-like serine/threonine-protei... [more]
Y1719_ARATH6.224e-3233.47Probable inactive receptor kinase At1g27190 OS=Ara... [more]
SRF1_ARATH6.224e-3235.04Protein STRUBBELIG-RECEPTOR FAMILY 1 OS=Arabidopsi... [more]
SRF4_ARATH8.128e-3234.62Protein STRUBBELIG-RECEPTOR FAMILY 4 OS=Arabidopsi... [more]
GSO2_ARATH8.128e-3237.30LRR receptor-like serine/threonine-protein kinase ... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAH2AF05RM1 PhII-IIIV1 Citrus clementina cDNA clone KN0AAH2AF05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929266 ID=FC929266; Name=FC929266; organism=Citrus clementina; type=EST; length=793bp
GTGAATTCTTATATGAGATAGCCATGATTTCGTGTTTGCAACACCCAAAT
CTTGTTAAAATTCATGGCTGTTGTGTTGAAGGGGATCAACTCTTGCTAGT
ATATGAATACATGGAAAACAACAGCCTTGCCCATGCTTTATTCGGTGGCG
AAAACAGTCAACTGAAATTGAACTGGCCAGTGAGGCAGAAGATCTGCCTT
GGGATAGCCAGAGGTTTAGCTTTTCTACATGAAGAATCCAGATTCAAAAT
AGTTCATAGAGACATCAAAGCTACGAATGTTCTGCTAGATAGAGATTTAA
ACCCCAAAATATCTGACTTTGGACTGGCTAAGCTTGATGAGGAGGAAAAA
ACTCACATCAGTACTCGAGTTGCTGGAACAATAGGATATATGGCACCAGA
GTACGCTCTATGGGGTTACTTGACCTACAAAGCAGATGTTTACAGTTTCG
GAGTTGTGGCTTTGGAAATCGTCAGTGGGAAGAATAATATGAGTTATGTG
CCAGACAGTAATTGCACCTGTCCTCTTGACTGGGCCTTCCATTTACACCG
AAGTGGTACGTTAATGGAGTTAGTGGATCCAAGGCTCGGATCAGAATTCA
ACAAGGTTGAAGCAGAGAGAATGATTAAAATAGCACTCTTATGCACCAAT
GCGTCACCTTCACTAAGGCCAACCATGTCTGAAGTGGTAAGCATGCTGGA
AGGATCTTCTAACATTCCGGATGTAATCCCTGAAGCCGGTGGTTTGAGTG
AAGACTTGAGGTTTAAAACTCTAAGAGAACATCCAAGAGAAAT
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