FC929266

Overview
NameFC929266
Unique NameFC929266
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length793
Libraries
Library NameType
PhII-IIIV1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig9285 contig Ccv1_Contig9285:2..794. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC929266 vs. ExPASy Swiss-Prot
Match: RKF3_ARATH (Probable LRR receptor-like serine/threonine-protein kinase RKF3 OS=Arabidopsis thaliana GN=RKF3 PE=1 SV=1)

HSP 1 Score: 202.986 bits (515), Expect = 1.575e-51
Identity = 108/248 (43.55%), Postives = 158/248 (63.71%), Query Frame = 3
Query:    6 FLYEIAMISCLQHPNLVKIHGCCV-----EGDQLLLVYEYMENNSLAHALFGGENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEEEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHRSGTLMELVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLEGSSNIPDVIPE 734
            F +E+ +I+ ++H NL+ + G C      EG Q ++V + + N SL   LFG   +QL   WP+RQ+I LG+ARGLA+LH  ++  I+HRDIKA+N+LLD     K++DFGLAK + E  TH+STRVAGT+GY+APEYAL+G LT K+DVYSFGVV LE++S +  +    +       DWA+ L R G  +++V+  +  +      E+ + IA+LC++     RPTM +VV MLE +      IP+
Sbjct:  324 FAHEVEVIASIRHVNLLALRGYCTATTPYEGHQRIIVCDLVSNGSLHDHLFGDLEAQLA--WPLRQRIALGMARGLAYLHYGAQPSIIHRDIKASNILLDERFEAKVADFGLAKFNPEGMTHMSTRVAGTMGYVAPEYALYGQLTEKSDVYSFGVVLLELLSRRKAIVTDEEGQPVSVADWAWSLVREGQTLDVVEDGMPEKGPPEVLEKYVLIAVLCSHPQLHARPTMDQVVKMLESNEFTVIAIPQ 569          
BLAST of FC929266 vs. ExPASy Swiss-Prot
Match: CRK39_ARATH (Putative cysteine-rich receptor-like protein kinase 39 OS=Arabidopsis thaliana GN=CRK39 PE=2 SV=1)

HSP 1 Score: 202.986 bits (515), Expect = 1.575e-51
Identity = 109/239 (45.61%), Postives = 160/239 (66.95%), Query Frame = 3
Query:    3 EFLYEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALFGGENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEEEKTHIST-RVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHRSGTLMELVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLEGSSNI 716
            EF  E+++++ LQH NLVK+ G C EGD+ +LVYE++ N+SL H +F  E   L L W +R +I  GIARGL +LHE+S+ KI+HRD+KA+N+LLD ++NPK++DFG A+L + ++T   T R+AGT GYMAPEY   G ++ K+DVYSFGV+ LE++SG+ N S+  +        +A+     G    ++DP L  E  + E  ++I+I LLC   +P+ RPTMS V+  L   +NI
Sbjct:  393 EFKNEVSLLTRLQHRNLVKLLGFCNEGDEQILVYEFVPNSSLDHFIFDDEKRSL-LTWEMRYRIIEGIARGLLYLHEDSQLKIIHRDLKASNILLDAEMNPKVADFGTARLFDSDETRAETKRIAGTRGYMAPEYLNHGQISAKSDVYSFGVMLLEMISGERNNSFEGEGLAA----FAWKRWVEGKPEIIIDPFL-IEKPRNEIIKLIQIGLLCVQENPTKRPTMSSVIIWLGSETNI 625          
BLAST of FC929266 vs. ExPASy Swiss-Prot
Match: CRK6_ARATH (Cysteine-rich receptor-like protein kinase 6 OS=Arabidopsis thaliana GN=CRK6 PE=1 SV=1)

HSP 1 Score: 202.601 bits (514), Expect = 2.057e-51
Identity = 105/237 (44.30%), Postives = 152/237 (64.14%), Query Frame = 3
Query:    3 EFLYEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALFGGENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEEEKTHIST-RVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHRSGTLMELVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLEGSS 710
            EF  E+ +++ LQH NLV++ G  ++G++ +LVYEYM N SL   LF     Q++L+W  R  I  GIARG+ +LH++SR  I+HRD+KA+N+LLD D+NPKI+DFG+A++   ++T  +T R+ GT GYMAPEYA+ G  + K+DVYSFGV+ LEI+SG+ N S+         L  A+ L  +   ++LVDP +       E  R I I LLC    P+ RP +S V  ML  ++
Sbjct:  391 EFKTEVVVVAKLQHRNLVRLLGFSLQGEERILVYEYMPNKSLDCLLFD-PTKQIQLDWMQRYNIIGGIARGILYLHQDSRLTIIHRDLKASNILLDADINPKIADFGMARIFGLDQTQDNTSRIVGTYGYMAPEYAMHGQFSMKSDVYSFGVLVLEIISGRKNSSFGESDGAQDLLTHAWRLWTNKKALDLVDPLIAENCQNSEVVRCIHIGLLCVQEDPAKRPAISTVFMMLTSNT 626          
BLAST of FC929266 vs. ExPASy Swiss-Prot
Match: CRK17_ARATH (Cysteine-rich receptor-like protein kinase 17 OS=Arabidopsis thaliana GN=CRK17 PE=2 SV=2)

HSP 1 Score: 202.601 bits (514), Expect = 2.057e-51
Identity = 107/238 (44.96%), Postives = 158/238 (66.39%), Query Frame = 3
Query:    3 EFLYEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALFGGENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEEEKTHIST-RVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMS-YVPDSNCTCPLDWAFHLHRSGTLMELVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLEGSS 710
            EF  E+ +++ LQH NLV++ G  ++G++ LLVYE++ N SL + LF   N + +L+W VR+ I  GI RG+ +LH++SR KI+HRD+KA+N+LLD D+NPKI+DFG+A++   ++T  +T RV GT GYM+PEY   G  + K+DVYSFGV+ LEI+SGK N S Y  D      + + + L  + T+ EL+DP +  +    E  R + I LLC   +P+ RPTMS +  +L  SS
Sbjct:  399 EFKNEVVVVAKLQHINLVRLLGFSLQGEEKLLVYEFVPNKSLDYFLFD-PNKRNQLDWTVRRNIIGGITRGILYLHQDSRLKIIHRDLKASNILLDADMNPKIADFGMARIFGVDQTVANTARVVGTFGYMSPEYVTHGQFSMKSDVYSFGVLILEIISGKKNSSFYQMDGLVNNLVTYVWKLWENKTMHELIDPFIKEDCKSDEVIRYVHIGLLCVQENPADRPTMSTIHQVLTTSS 635          
BLAST of FC929266 vs. ExPASy Swiss-Prot
Match: BAK1_ARATH (BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 OS=Arabidopsis thaliana GN=BAK1 PE=1 SV=2)

HSP 1 Score: 202.216 bits (513), Expect = 2.687e-51
Identity = 106/236 (44.92%), Postives = 150/236 (63.56%), Query Frame = 3
Query:    3 EFLYEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALFGGENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEEEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKN--NMSYVPDSNCTCPLDWAFHLHRSGTLMELVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLEG 704
            +F  E+ MIS   H NL+++ G C+   + LLVY YM N S+A  L     SQ  L+WP RQ+I LG ARGLA+LH+    KI+HRD+KA N+LLD +    + DFGLAKL + + TH++T V GTIG++APEY   G  + K DV+ +GV+ LE+++G+   +++ + + +    LDW   L +   L  LVD  L   +   E E++I++ALLCT +SP  RP MSEVV MLEG
Sbjct:  330 QFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEG 565          
BLAST of FC929266 vs. ExPASy Swiss-Prot
Match: SERK1_ARATH (Somatic embryogenesis receptor kinase 1 OS=Arabidopsis thaliana GN=SERK1 PE=1 SV=2)

HSP 1 Score: 201.83 bits (512), Expect = 3.509e-51
Identity = 104/236 (44.07%), Postives = 152/236 (64.41%), Query Frame = 3
Query:    3 EFLYEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALFGGENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEEEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKN--NMSYVPDSNCTCPLDWAFHLHRSGTLMELVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLEG 704
            +F  E+ MIS   H NL+++ G C+   + LLVY YM N S+A  L     SQ  L+WP R++I LG ARGL++LH+    KI+HRD+KA N+LLD +    + DFGLAKL + + TH++T V GTIG++APEY   G  + K DV+ +G++ LE+++G+   +++ + + +    LDW   L +   L  LVDP L + + + E E++I++ALLCT  SP  RP MSEVV MLEG
Sbjct:  343 QFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQPPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEMLVDPDLQTNYEERELEQVIQVALLCTQGSPMERPKMSEVVRMLEG 578          
BLAST of FC929266 vs. ExPASy Swiss-Prot
Match: CRK4_ARATH (Cysteine-rich receptor-like protein kinase 4 OS=Arabidopsis thaliana GN=CRK4 PE=2 SV=1)

HSP 1 Score: 201.83 bits (512), Expect = 3.509e-51
Identity = 111/250 (44.40%), Postives = 160/250 (64.00%), Query Frame = 3
Query:    3 EFLYEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALFGGENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEEEKTHIST-RVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMS-YVPDSNCTCPL-DWAFHLHRSGTLMELVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLEGSSNIPDVIPEAGG 743
            EF  E+ +++ LQH NLV++ G C+E D+ +LVYE++ N SL + +F      L L+W  R KI  GIARG+ +LH++SR  I+HRD+KA N+LL  D+N KI+DFG+A++   ++T  +T R+ GT GYM+PEYA++G  + K+DVYSFGV+ LEI+SGK N + Y  D      L  + + L  +G+ +ELVDP     +   E  R I IALLC       RPTMS +V ML  +S+I   +P+  G
Sbjct:  391 EFANEVIVVAKLQHRNLVRLLGFCLERDERILVYEFVPNKSLDYFIFDSTMQSL-LDWTRRYKIIGGIARGILYLHQDSRLTIIHRDLKAGNILLGDDMNAKIADFGMARIFGMDQTEANTRRIVGTYGYMSPEYAMYGQFSMKSDVYSFGVLVLEIISGKKNSNVYQMDGTSAGNLVTYTWRLWSNGSPLELVDPSFRDNYRINEVSRCIHIALLCVQEEAEDRPTMSAIVQMLT-TSSIALAVPQRPG 638          
BLAST of FC929266 vs. ExPASy Swiss-Prot
Match: CRK25_ARATH (Cysteine-rich receptor-like protein kinase 25 OS=Arabidopsis thaliana GN=CRK25 PE=2 SV=1)

HSP 1 Score: 201.83 bits (512), Expect = 3.509e-51
Identity = 105/248 (42.34%), Postives = 160/248 (64.52%), Query Frame = 3
Query:    3 EFLYEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALFGGENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEEEKTHIST-RVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHRSGTLMELVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLEGSSNIPDVIPEAGG 743
            EF  E+ +++ LQH NL K+ G C++G++ +LVYE++ N SL + LF  E  ++ L+W  R KI  GIARG+ +LH +SR  I+HRD+KA+N+LLD D++PKISDFG+A++   ++T  +T R+ GT GYM+PEYA+ G  + K+DVYSFGV+ LE+++GK N S+  +      + + + L    + +ELVD  +   F   E  R I IALLC     S RP+M +++ M+  S  +   IP+  G
Sbjct:  387 EFKNEVDVVAKLQHRNLAKLLGYCLDGEEKILVYEFVPNKSLDYFLFDNEKRRV-LDWQRRYKIIEGIARGILYLHRDSRLTIIHRDLKASNILLDADMHPKISDFGMARIFGVDQTQANTKRIVGTYGYMSPEYAIHGKYSVKSDVYSFGVLVLELITGKKNSSFYEEDGLGDLVTYVWKLWVENSPLELVDEAMRGNFQTNEVIRCIHIALLCVQEDSSERPSMDDILVMM-NSFTVTLPIPKRSG 632          
BLAST of FC929266 vs. ExPASy Swiss-Prot
Match: Y1105_ARATH (Probable receptor-like protein kinase At1g11050 OS=Arabidopsis thaliana GN=At1g11050 PE=2 SV=1)

HSP 1 Score: 200.29 bits (508), Expect = 1.021e-50
Identity = 111/254 (43.70%), Postives = 159/254 (62.60%), Query Frame = 3
Query:    3 EFLYEIAMISCLQHPNLVKIHGCCVEGD----QLLLVYEYMENNSLAHALFG-GENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEEEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKN--NMSYVPDSNCTCPLDWAFHLHRSGTLMELVDPRL------GSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLEGSSNIPDV 725
            EF  E+ +IS L+H NLV + GC +  D    Q  LVY+YM N +L   LF  GE +++ L+WP R+ I L +A+GLA+LH   +  I HRDIK TN+LLD D+  +++DFGLAK   E ++H++TRVAGT GY+APEYAL+G LT K+DVYSFGVV LEI+ G+   ++S     N     DWA+ L ++G   E ++  L      G    K   ER +++ +LC +   +LRPT+ + + MLEG   +P +
Sbjct:  335 EFRNEVEIISNLKHRNLVPLRGCSMVDDDSESQRYLVYDYMSNGNLDDHLFPRGETTKMPLSWPQRKSIILDVAKGLAYLHYGVKPAIYHRDIKGTNILLDVDMRARVADFGLAKQSREGESHLTTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMCGRKALDLSTSGSPNTFLITDWAWSLVKAGKTEEALEQSLLREEGSGLSNPKGIMERFLQVGILCAHVLVALRPTILDALKMLEGDIEVPPI 588          
BLAST of FC929266 vs. ExPASy Swiss-Prot
Match: CRK16_ARATH (Putative cysteine-rich receptor-like protein kinase 16 OS=Arabidopsis thaliana GN=CRK16 PE=2 SV=2)

HSP 1 Score: 200.29 bits (508), Expect = 1.021e-50
Identity = 106/234 (45.30%), Postives = 153/234 (65.38%), Query Frame = 3
Query:    3 EFLYEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALFGGENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEEEKTHIST-RVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVP-DSNCTCPLDWAFHLHRSGTLMELVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSML 698
            EF  E+ +++ LQH NLV++ G  VEG++ +LVYEYM N SL + LF     + +L+W  R  I  G+ RG+ +LH++SR  I+HRD+KA N+LLD D+NPKI+DFG+A+    ++T  +T RV GT GYM PEY   G  + K+DVYSFGV+ LEI+ GK + S+   D +    + + + L  + + +ELVDP +G  ++K E  R I I+LLC   +P+ RPTMS V  ML
Sbjct:  375 EFKNEVLLVAKLQHRNLVRLLGFSVEGEEKILVYEYMPNKSLDYFLFD-HRRRGQLDWRTRYNIIRGVTRGILYLHQDSRLTIIHRDLKAGNILLDVDMNPKIADFGVARNFRVDQTEATTGRVVGTFGYMPPEYVANGQFSMKSDVYSFGVLILEIIVGKKSSSFHEIDGSVGNLVTYVWRLWNNESFLELVDPAMGESYDKDEVIRCIHISLLCVQENPADRPTMSTVFQML 607          
The following BLAST results are available for this feature:
BLAST of FC929266 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
RKF3_ARATH1.575e-5143.55Probable LRR receptor-like serine/threonine-protei... [more]
CRK39_ARATH1.575e-5145.61Putative cysteine-rich receptor-like protein kinas... [more]
CRK6_ARATH2.057e-5144.30Cysteine-rich receptor-like protein kinase 6 OS=Ar... [more]
CRK17_ARATH2.057e-5144.96Cysteine-rich receptor-like protein kinase 17 OS=A... [more]
BAK1_ARATH2.687e-5144.92BRASSINOSTEROID INSENSITIVE 1-associated receptor ... [more]
SERK1_ARATH3.509e-5144.07Somatic embryogenesis receptor kinase 1 OS=Arabido... [more]
CRK4_ARATH3.509e-5144.40Cysteine-rich receptor-like protein kinase 4 OS=Ar... [more]
CRK25_ARATH3.509e-5142.34Cysteine-rich receptor-like protein kinase 25 OS=A... [more]
Y1105_ARATH1.021e-5043.70Probable receptor-like protein kinase At1g11050 OS... [more]
CRK16_ARATH1.021e-5045.30Putative cysteine-rich receptor-like protein kinas... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAH2AF05RM1 PhII-IIIV1 Citrus clementina cDNA clone KN0AAH2AF05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929266 ID=FC929266; Name=FC929266; organism=Citrus clementina; type=EST; length=793bp
GTGAATTCTTATATGAGATAGCCATGATTTCGTGTTTGCAACACCCAAAT
CTTGTTAAAATTCATGGCTGTTGTGTTGAAGGGGATCAACTCTTGCTAGT
ATATGAATACATGGAAAACAACAGCCTTGCCCATGCTTTATTCGGTGGCG
AAAACAGTCAACTGAAATTGAACTGGCCAGTGAGGCAGAAGATCTGCCTT
GGGATAGCCAGAGGTTTAGCTTTTCTACATGAAGAATCCAGATTCAAAAT
AGTTCATAGAGACATCAAAGCTACGAATGTTCTGCTAGATAGAGATTTAA
ACCCCAAAATATCTGACTTTGGACTGGCTAAGCTTGATGAGGAGGAAAAA
ACTCACATCAGTACTCGAGTTGCTGGAACAATAGGATATATGGCACCAGA
GTACGCTCTATGGGGTTACTTGACCTACAAAGCAGATGTTTACAGTTTCG
GAGTTGTGGCTTTGGAAATCGTCAGTGGGAAGAATAATATGAGTTATGTG
CCAGACAGTAATTGCACCTGTCCTCTTGACTGGGCCTTCCATTTACACCG
AAGTGGTACGTTAATGGAGTTAGTGGATCCAAGGCTCGGATCAGAATTCA
ACAAGGTTGAAGCAGAGAGAATGATTAAAATAGCACTCTTATGCACCAAT
GCGTCACCTTCACTAAGGCCAACCATGTCTGAAGTGGTAAGCATGCTGGA
AGGATCTTCTAACATTCCGGATGTAATCCCTGAAGCCGGTGGTTTGAGTG
AAGACTTGAGGTTTAAAACTCTAAGAGAACATCCAAGAGAAAT
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