FC929266

Overview
NameFC929266
Unique NameFC929266
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length793
Libraries
Library NameType
PhII-IIIV1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC929266 vs. ExPASy Swiss-Prot
Match: LYN_RAT (Tyrosine-protein kinase Lyn OS=Rattus norvegicus GN=Lyn PE=2 SV=3)

HSP 1 Score: 86.6557 bits (213), Expect = 1.645e-16
Identity = 52/157 (33.12%), Postives = 86/157 (54.78%), Query Frame = 3
Query:    6 FLYEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALFGGENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEEEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVS 476
            FL E  ++  LQH  LV+++    + + + ++ E+M   SL   L   E S++ L  P        IA G+A++  ++    +HRD++A NVL+   L  KI+DFGLA++ E+ +          I + APE   +G  T K+DV+SFG++  EIV+
Sbjct:  287 FLEEANLMKTLQHDKLVRLYAVVTKEEPIYIITEFMAKGSLLDFLKSDEGSKVLL--PKLIDFSAQIAEGMAYIERKN---YIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGCFTIKSDVWSFGILLYEIVT 438          
BLAST of FC929266 vs. ExPASy Swiss-Prot
Match: LIMK1_RAT (LIM domain kinase 1 OS=Rattus norvegicus GN=Limk1 PE=2 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.645e-16
Identity = 70/245 (28.57%), Postives = 108/245 (44.08%), Query Frame = 3
Query:    6 FLYEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALFGGENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEEEKTHIST-------------RVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHRSGTLMELVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLE 701
            FL E+ ++ CL+HPN++K  G   +  +L  + EY++  +L   +   ++   +  W  R      IA G+A+LH      I+HRD+ + N L+  + N  ++DFGLA+L  +EK                   V G   +MAPE         K DV+SFG+V  EI+ G+ N    PD     P    F L+  G L     P     F          I + C +  P  RP+  ++   LE
Sbjct:  381 FLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEYIKGGTLRGII---KSMDSQYPWSQRVSFAKDIASGMAYLHS---MNIIHRDLNSHNCLVRENRNVVVADFGLARLMIDEKGQSEDLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEII-GRVNAD--PD---YLPRTMDFGLNVRGFLDRYCPPNCPPSF--------FPITVRCCDLDPEKRPSFVKLEQWLE 605          
BLAST of FC929266 vs. ExPASy Swiss-Prot
Match: CLA4_CANAL (Serine/threonine-protein kinase CLA4 OS=Candida albicans GN=CLA4 PE=3 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.645e-16
Identity = 58/158 (36.71%), Postives = 86/158 (54.43%), Query Frame = 3
Query:   15 EIAMISCLQHPNLVKIHGCCVEGD-QLLLVYEYMENNSLAHALFGGENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGL-AKLDEEEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGK 482
            EI ++   QH N+V      + GD +L ++ EYM+  SL   +   EN+  KLN      IC    +GL  LH++    I+HRDIK+ NVLLD   N KI+DFG  AKL ++     +  + GT  +MAPE         K DV+S G++ +E++ G+
Sbjct:  726 EILVMKDSQHKNIVNFLDSYLIGDNELWVIMEYMQGGSLTEII---ENNDFKLNEKQIATICFETLKGLQHLHKKH---IIHRDIKSDNVLLDAYGNVKITDFGFCAKLTDQRNKRAT--MVGTPYWMAPEVVKQKEYDEKVDVWSLGIMTIEMIEGE 875          
BLAST of FC929266 vs. ExPASy Swiss-Prot
Match: PHG2_DICDI (Serine/threonine-protein kinase phg2 OS=Dictyostelium discoideum GN=phg2 PE=1 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 2.149e-16
Identity = 67/240 (27.92%), Postives = 109/240 (45.42%), Query Frame = 3
Query:    6 FLYEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALFGGENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEEEKTHIST--RVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHRSGTLMELVDPRLGSEFNKVE-------AERMIKIALLCTNASPSLRPTMSEVVSML 698
            F  E  ++S +Q P L+  +G C+E  QL +V EY    +L   L    N  L  +W    K    +  G+ +LH  +   +VHRD+K  N+L+  D   K+ DFGL +      T++ST   + GT+ Y APE         K+DVYS GV+  E +    +  Y+            FH H     ++++   + +  NKV         E++  +   C + +P  RP   E++ +L
Sbjct:  849 FKKECDILSTIQSPLLISFYGSCIEESQLSMVVEYCSKGTLHKVL---NNPLLDFDWDKWFKWMTEVVEGVRYLHSMNP-PMVHRDLKTLNILISSDWTAKLCDFGLTR--TMTMTNVSTLGMLRGTMAYTAPEIYDGLLFNTKSDVYSLGVIMWEAIQRCISGVYLR----------PFHEHPISMDIQII---ILTSKNKVRPKISENCPEQLKTLITRCWDENPDKRPNCDEILEIL 1069          
BLAST of FC929266 vs. ExPASy Swiss-Prot
Match: LYN_HUMAN (Tyrosine-protein kinase Lyn OS=Homo sapiens GN=LYN PE=1 SV=3)

HSP 1 Score: 86.2705 bits (212), Expect = 2.149e-16
Identity = 52/157 (33.12%), Postives = 84/157 (53.50%), Query Frame = 3
Query:    6 FLYEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALFGGENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEEEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVS 476
            FL E  ++  LQH  LV+++      + + ++ EYM   SL   L   E  ++ L  P        IA G+A++  ++    +HRD++A NVL+   L  KI+DFGLA++ E+ +          I + APE   +G  T K+DV+SFG++  EIV+
Sbjct:  287 FLEEANLMKTLQHDKLVRLYAVVTREEPIYIITEYMAKGSLLDFLKSDEGGKVLL--PKLIDFSAQIAEGMAYIERKN---YIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGCFTIKSDVWSFGILLYEIVT 438          
BLAST of FC929266 vs. ExPASy Swiss-Prot
Match: SRC1_XENLA (Tyrosine-protein kinase Src-1 OS=Xenopus laevis GN=src-A PE=2 SV=4)

HSP 1 Score: 85.8853 bits (211), Expect = 2.807e-16
Identity = 54/157 (34.39%), Postives = 87/157 (55.41%), Query Frame = 3
Query:    6 FLYEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALFGGENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEEEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVS 476
            FL E  ++  L+H  LV+++    E + + +V EY+   SL   L G     L+L  P    +   IA G+A++    R   VHRD++A N+L+  +L  K++DFGLA+L E+ +          I + APE AL+G  T K+DV+SFG++  E+ +
Sbjct:  306 FLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYISKGSLLDFLKGEMGRYLRL--PQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTT 456          
BLAST of FC929266 vs. ExPASy Swiss-Prot
Match: PKN1_THETN (Probable serine/threonine-protein kinase Sps1 OS=Thermoanaerobacter tengcongensis GN=sps1 PE=3 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 2.807e-16
Identity = 69/235 (29.36%), Postives = 113/235 (48.09%), Query Frame = 3
Query:    3 EFLYEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALF-GGENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEEEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHRSGTLMELVDPRLGSEFNKVEAERMIKIALLCTNASPSLR-PTMSEVVSMLE 701
            +F  E    + L HPN+V I+    EGD   +V EY++  +L   +   G   ++K    +  ++C    R L   H+    KI+HRDIK  N+L+  +   K++DFG+A+         +  V GT  Y +PE A    +  + D+YS G+V  E+++GK  + +  DS  +  L    H+       +++ P   S  N+   E + KI L  T   P+LR  T SE +  L+
Sbjct:   54 KFKRESQAAASLSHPNIVGIYDVGQEGDIYYIVMEYVKGRTLKELIRENGGPLEVKRAVEIASQVC----RALDHAHKN---KIIHRDIKPQNILVTDEDVVKVTDFGIARAANGATITYTGDVIGTAYYFSPEQAKGSIVDERTDIYSLGIVLFEMLTGK--VPFEGDSPISVALK---HIQE-----DILPP---SRLNEKVPEELDKIVLKATQKDPNLRYQTASEFLKDLD 268          
BLAST of FC929266 vs. ExPASy Swiss-Prot
Match: M3K12_RAT (Mitogen-activated protein kinase kinase kinase 12 OS=Rattus norvegicus GN=Map3k12 PE=1 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 2.807e-16
Identity = 53/158 (33.54%), Postives = 86/158 (54.43%), Query Frame = 3
Query:   15 EIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALFGGE--NSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEEEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGK 482
            +I  +  L+HPN++   G C +     ++ E+     L   L  G      L ++W       +GIA G+ +LH     KI+HRD+K+ N+L+  D   KISDFG +K   ++ T +S   AGT+ +MAPE      ++ K D++SFGVV  E+++G+
Sbjct:  194 DIKHLRKLKHPNIITFKGVCTQAPCYCILMEFCAQGQLYEVLRAGRPVTPSLLVDWS------MGIAGGMNYLHLH---KIIHRDLKSPNMLITYDDVVKISDFGTSKELSDKSTKMS--FAGTVAWMAPEVIRNEPVSEKVDIWSFGVVLWELLTGE 340          
BLAST of FC929266 vs. ExPASy Swiss-Prot
Match: M3K12_MOUSE (Mitogen-activated protein kinase kinase kinase 12 OS=Mus musculus GN=Map3k12 PE=1 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 2.807e-16
Identity = 53/158 (33.54%), Postives = 86/158 (54.43%), Query Frame = 3
Query:   15 EIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALFGGE--NSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEEEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGK 482
            +I  +  L+HPN++   G C +     ++ E+     L   L  G      L ++W       +GIA G+ +LH     KI+HRD+K+ N+L+  D   KISDFG +K   ++ T +S   AGT+ +MAPE      ++ K D++SFGVV  E+++G+
Sbjct:  194 DIKHLRKLKHPNIITFKGVCTQAPCYCILMEFCAQGQLYEVLRAGRPVTPSLLVDWS------MGIAGGMNYLHLH---KIIHRDLKSPNMLITYDDVVKISDFGTSKELSDKSTKMS--FAGTVAWMAPEVIRNEPVSEKVDIWSFGVVLWELLTGE 340          
BLAST of FC929266 vs. ExPASy Swiss-Prot
Match: M3K12_HUMAN (Mitogen-activated protein kinase kinase kinase 12 OS=Homo sapiens GN=MAP3K12 PE=1 SV=2)

HSP 1 Score: 85.8853 bits (211), Expect = 2.807e-16
Identity = 53/158 (33.54%), Postives = 86/158 (54.43%), Query Frame = 3
Query:   15 EIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALFGGE--NSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEEEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGK 482
            +I  +  L+HPN++   G C +     ++ E+     L   L  G      L ++W       +GIA G+ +LH     KI+HRD+K+ N+L+  D   KISDFG +K   ++ T +S   AGT+ +MAPE      ++ K D++SFGVV  E+++G+
Sbjct:  161 DIKHLRKLKHPNIITFKGVCTQAPCYCILMEFCAQGQLYEVLRAGRPVTPSLLVDWS------MGIAGGMNYLHLH---KIIHRDLKSPNMLITYDDVVKISDFGTSKELSDKSTKMS--FAGTVAWMAPEVIRNEPVSEKVDIWSFGVVLWELLTGE 307          
The following BLAST results are available for this feature:
BLAST of FC929266 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
LYN_RAT1.645e-1633.12Tyrosine-protein kinase Lyn OS=Rattus norvegicus G... [more]
LIMK1_RAT1.645e-1628.57LIM domain kinase 1 OS=Rattus norvegicus GN=Limk1 ... [more]
CLA4_CANAL1.645e-1636.71Serine/threonine-protein kinase CLA4 OS=Candida al... [more]
PHG2_DICDI2.149e-1627.92Serine/threonine-protein kinase phg2 OS=Dictyostel... [more]
LYN_HUMAN2.149e-1633.12Tyrosine-protein kinase Lyn OS=Homo sapiens GN=LYN... [more]
SRC1_XENLA2.807e-1634.39Tyrosine-protein kinase Src-1 OS=Xenopus laevis GN... [more]
PKN1_THETN2.807e-1629.36Probable serine/threonine-protein kinase Sps1 OS=T... [more]
M3K12_RAT2.807e-1633.54Mitogen-activated protein kinase kinase kinase 12 ... [more]
M3K12_MOUSE2.807e-1633.54Mitogen-activated protein kinase kinase kinase 12 ... [more]
M3K12_HUMAN2.807e-1633.54Mitogen-activated protein kinase kinase kinase 12 ... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAH2AF05RM1 PhII-IIIV1 Citrus clementina cDNA clone KN0AAH2AF05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929266 ID=FC929266; Name=FC929266; organism=Citrus clementina; type=EST; length=793bp
GTGAATTCTTATATGAGATAGCCATGATTTCGTGTTTGCAACACCCAAAT
CTTGTTAAAATTCATGGCTGTTGTGTTGAAGGGGATCAACTCTTGCTAGT
ATATGAATACATGGAAAACAACAGCCTTGCCCATGCTTTATTCGGTGGCG
AAAACAGTCAACTGAAATTGAACTGGCCAGTGAGGCAGAAGATCTGCCTT
GGGATAGCCAGAGGTTTAGCTTTTCTACATGAAGAATCCAGATTCAAAAT
AGTTCATAGAGACATCAAAGCTACGAATGTTCTGCTAGATAGAGATTTAA
ACCCCAAAATATCTGACTTTGGACTGGCTAAGCTTGATGAGGAGGAAAAA
ACTCACATCAGTACTCGAGTTGCTGGAACAATAGGATATATGGCACCAGA
GTACGCTCTATGGGGTTACTTGACCTACAAAGCAGATGTTTACAGTTTCG
GAGTTGTGGCTTTGGAAATCGTCAGTGGGAAGAATAATATGAGTTATGTG
CCAGACAGTAATTGCACCTGTCCTCTTGACTGGGCCTTCCATTTACACCG
AAGTGGTACGTTAATGGAGTTAGTGGATCCAAGGCTCGGATCAGAATTCA
ACAAGGTTGAAGCAGAGAGAATGATTAAAATAGCACTCTTATGCACCAAT
GCGTCACCTTCACTAAGGCCAACCATGTCTGAAGTGGTAAGCATGCTGGA
AGGATCTTCTAACATTCCGGATGTAATCCCTGAAGCCGGTGGTTTGAGTG
AAGACTTGAGGTTTAAAACTCTAAGAGAACATCCAAGAGAAAT
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