FC929266

Overview
NameFC929266
Unique NameFC929266
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length793
Libraries
Library NameType
PhII-IIIV1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC929266 vs. ExPASy Swiss-Prot
Match: EPHA7_CHICK (Ephrin type-A receptor 7 OS=Gallus gallus GN=EPHA7 PE=2 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 2.807e-16
Identity = 54/162 (33.33%), Postives = 92/162 (56.79%), Query Frame = 3
Query:    3 EFLYEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHAL--FGGENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEEEKTHISTRVAGTI--GYMAPEYALWGYLTYKADVYSFGVVALEIVS 476
            +FL E +++    HPN+V + G    G  +++V EYMEN +L   L    G+ + ++L   +R     GIA G+ +L +      VHRD+ A N+L++ +L  K+SDFGL+++ E++   + T   G I   + APE   +   T  +DV+S+G+V  E++S
Sbjct:  673 DFLCEASIMGQFDHPNVVHLEGVVTRGKPVMIVIEYMENGALDAFLRKHDGQFTVIQLVGMLR-----GIAAGMRYLADMG---YVHRDLAARNILVNSNLVCKVSDFGLSRVIEDDPEAVYTTTGGKIPVRWTAPEAIQYRKFTSASDVWSYGIVMWEVMS 826          
BLAST of FC929266 vs. ExPASy Swiss-Prot
Match: SRK2_SPOLA (Tyrosine-protein kinase SRK2 (Fragment) OS=Spongilla lacustris GN=SRK2 PE=2 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 3.666e-16
Identity = 65/232 (28.02%), Postives = 112/232 (48.28%), Query Frame = 3
Query:    6 FLYEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALFGGENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEEEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHRSGTLMELVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLE 701
            FL E  ++  L+HP L++++  C +G+ + ++ E M   SL   L  GE   LKL  P    +   +A G+A+L   +    +HRD+ A N+L+  +   K++DFGLA+L   +  + +      I + APE AL+   + K+DV+SFG++  E+V+    + Y   SN                +++ +D            E + +I L C   +P+ RPT   +   LE
Sbjct:  135 FLAEAQIMKKLRHPKLIQLYAVCTQGEPVYIITELMSKGSLLDYL-QGEAGALKL--PQLIDMAAQVAAGMAYLELHN---YIHRDLAARNILVGDNNICKVADFGLARLIVSDDYNATEGAKFPIKWTAPEAALFNRFSIKSDVWSFGILITELVT-YGRIPYPGMSN--------------AEVLQNLDKGYRMPCPVTTPESLYQIMLDCWKRNPADRPTFEALQWRLE 345          
BLAST of FC929266 vs. ExPASy Swiss-Prot
Match: OXSR1_MOUSE (Serine/threonine-protein kinase OSR1 OS=Mus musculus GN=Oxsr1 PE=1 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 3.666e-16
Identity = 70/239 (29.29%), Postives = 107/239 (44.77%), Query Frame = 3
Query:    3 EFLYEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNS----LAHALFGGENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFG----LAKLDEEEKTHISTRVAGTIGYMAPEY--ALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHRSGTLMELVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVV 689
            E L EI  +S   HPN+V  +   V  D+L LV + +   S    + H +  GE+    L+ P    I   +  GL +LH+  +   +HRD+KA N+LL  D + +I+DFG    LA   +  +  +     GT  +MAPE    + GY  +KAD++SFG+ A+E+ +G       P             L        L       E  K   +   K+  LC    P  RPT +E++
Sbjct:   59 ELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDEPTIATILREVLEGLEYLHKNGQ---IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGY-DFKADIWSFGITAIELATGAAPYHKYPPMK-------VLMLTLQNDPPSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELL 286          
BLAST of FC929266 vs. ExPASy Swiss-Prot
Match: M313B_XENLA (Mitogen-activated protein kinase kinase kinase 13-B OS=Xenopus laevis GN=map3k13-B PE=2 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 3.666e-16
Identity = 54/158 (34.18%), Postives = 83/158 (52.53%), Query Frame = 3
Query:   15 EIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALFGGENSQLKL--NWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEEEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGK 482
            +I  +  L+HPN++   G C +     ++ EY     L   L  G     KL   W        GIA G+ +LH     KI+HRD+K+ NVL+      KISDFG +K   ++ T +S   AGT+ +MAPE      ++ K D++SFGV+  E+++G+
Sbjct:  207 DIKHLRKLKHPNIIAFKGVCTQAPCYCILMEYCAQGQLYEVLRAGRKVTPKLLVEWST------GIASGMNYLHLH---KIIHRDLKSPNVLVTHADTVKISDFGTSKELSDKSTKMS--FAGTVAWMAPEVIRNEPVSEKVDIWSFGVLLWELLTGE 353          
BLAST of FC929266 vs. ExPASy Swiss-Prot
Match: ITK_MOUSE (Tyrosine-protein kinase ITK/TSK OS=Mus musculus GN=Itk PE=1 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 3.666e-16
Identity = 66/238 (27.73%), Postives = 111/238 (46.64%), Query Frame = 3
Query:    3 EFLYEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLA------HALFGGENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEEEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHRSGTLMELVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSML 698
            +F+ E  ++  L HP LV+++G C+E   + LV+E+ME+  L+        LF  E             +CL +  G+A+L +     ++HRD+ A N L+  +   K+SDFG+ +   +++   ST     + + +PE   +   + K+DV+SFGV+  E+ S +  + Y   SN     D         T   L  PRL S         + +I   C    P  RP  S+++S L
Sbjct:  407 DFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRSQRGLFAAETLL---------GMCLDVCEGMAYLEKAC---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFS-EGKIPYENRSNSEVVED-------ISTGFRLYKPRLAS-------CHVYQIMNHCWKEKPEDRPPFSQLLSQL 617          
BLAST of FC929266 vs. ExPASy Swiss-Prot
Match: ITK_HUMAN (Tyrosine-protein kinase ITK/TSK OS=Homo sapiens GN=ITK PE=1 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 3.666e-16
Identity = 66/238 (27.73%), Postives = 109/238 (45.80%), Query Frame = 3
Query:    3 EFLYEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLA------HALFGGENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEEEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHRSGTLMELVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSML 698
            +F+ E  ++  L HP LV+++G C+E   + LV+E+ME+  L+        LF  E             +CL +  G+A+L E     ++HRD+ A N L+  +   K+SDFG+ +   +++   ST     + + +PE   +   + K+DV+SFGV+  E+ S +  + Y   SN     D         T   L  PRL S         + +I   C    P  RP  S ++  L
Sbjct:  402 DFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLL---------GMCLDVCEGMAYLEEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFS-EGKIPYENRSNSEVVED-------ISTGFRLYKPRLAS-------THVYQIMNHCWKERPEDRPAFSRLLRQL 612          
BLAST of FC929266 vs. ExPASy Swiss-Prot
Match: FRK_RAT (Tyrosine-protein kinase FRK OS=Rattus norvegicus GN=Frk PE=1 SV=3)

HSP 1 Score: 85.5001 bits (210), Expect = 3.666e-16
Identity = 68/237 (28.69%), Postives = 111/237 (46.84%), Query Frame = 3
Query:    3 EFLYEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALFGGENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLA---KLDEEEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVS-GKNNMSYVPDSNCTCPLDWAFHLHRSGTLMELVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLE 701
            +FL E  ++  L+HP L++++  C   D + ++ E M + SL   L     S+++L   V   +   +A G+A+L  ++    +HRD+ A NVL+      K++DFGLA   K+D E+       +   + + APE       + K+DV+SFG++  EI++ GK     +P S  T     A  +H  G    L  P           E+   I + C N  P  RPT   +   LE
Sbjct:  274 DFLREAQIMKSLRHPKLIQLYAVCTLEDPIYIITELMRHGSLQEYLQNDGGSKIRLTQQV--DMAAQVASGMAYLESQN---YIHRDLAARNVLVGEHNIYKVADFGLARVFKVDNEDIYESKHEIKLPVKWTAPEAIRTNKFSIKSDVWSFGILLYEIITYGK-----MPYSGMT----GAQVIHMLGQNYRLPQP-------SNCPEQFYSIMMECWNVEPKQRPTFETLHWKLE 489          
BLAST of FC929266 vs. ExPASy Swiss-Prot
Match: FGR_HUMAN (Proto-oncogene tyrosine-protein kinase Fgr OS=Homo sapiens GN=FGR PE=1 SV=2)

HSP 1 Score: 85.5001 bits (210), Expect = 3.666e-16
Identity = 52/157 (33.12%), Postives = 90/157 (57.32%), Query Frame = 3
Query:    6 FLYEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALFGGENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEEEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVS 476
            FL E  ++  L+H  LV+++    E + + +V E+M + SL   L   E   L+L  P    +   +A G+A++    R   +HRD++A N+L+   L  KI+DFGLA+L ++++ +        I + APE AL+G  T K+DV+SFG++  E+++
Sbjct:  303 FLEEAQVMKLLRHDKLVQLYAVVSE-EPIYIVTEFMCHGSLLDFLKNPEGQDLRL--PQLVDMAAQVAEGMAYME---RMNYIHRDLRAANILVGERLACKIADFGLARLIKDDEYNPCQGSKFPIKWTAPEAALFGRFTIKSDVWSFGILLTELIT 453          
BLAST of FC929266 vs. ExPASy Swiss-Prot
Match: BLK_HUMAN (Tyrosine-protein kinase Blk OS=Homo sapiens GN=BLK PE=1 SV=3)

HSP 1 Score: 85.5001 bits (210), Expect = 3.666e-16
Identity = 74/233 (31.76%), Postives = 113/233 (48.50%), Query Frame = 3
Query:    6 FLYEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALFGGENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEEEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVS-GKNNMSYVPDSNCTCPLDWAFHLHRSGTLMELVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLE 701
            FL E  ++  LQH  LV+++   V  + + +V EYM    L   L   E S+L L  P    +   IA G+A++    R   +HRD++A N+L+   L  KI+DFGLA++ + E T         I + APE   +G  T KADV+SFGV+ +E+V+ G+     + +      L+  + + R  T      P L   +  V AE        C  + P  RPT   + S+LE
Sbjct:  281 FLGEANVMKALQHERLVRLYAV-VTKEPIYIVTEYMARGCLLDFLKTDEGSRLSL--PRLIDMSAQIAEGMAYIE---RMNSIHRDLRAANILVSEALCCKIADFGLARIIDSEYT-AQEGAKFPIKWTAPEAIHFGVFTIKADVWSFGVLLMEVVTYGRVPYPGMSNPEVIRNLERGYRMPRPDT----CPPEL---YRGVIAE--------CWRSRPEERPTFEFLQSVLE 491          
BLAST of FC929266 vs. ExPASy Swiss-Prot
Match: LYN_MOUSE (Tyrosine-protein kinase Lyn OS=Mus musculus GN=Lyn PE=1 SV=4)

HSP 1 Score: 85.1149 bits (209), Expect = 4.787e-16
Identity = 51/157 (32.48%), Postives = 85/157 (54.14%), Query Frame = 3
Query:    6 FLYEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALFGGENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEEEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVS 476
            FL E  ++  LQH  LV+++    + + + ++ E+M   SL   L   E  ++ L  P        IA G+A++  ++    +HRD++A NVL+   L  KI+DFGLA++ E+ +          I + APE   +G  T K+DV+SFG++  EIV+
Sbjct:  287 FLEEANLMKTLQHDKLVRLYAVVTKEEPIYIITEFMAKGSLLDFLKSDEGGKVLL--PKLIDFSAQIAEGMAYIERKN---YIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGCFTIKSDVWSFGILLYEIVT 438          
The following BLAST results are available for this feature:
BLAST of FC929266 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
EPHA7_CHICK2.807e-1633.33Ephrin type-A receptor 7 OS=Gallus gallus GN=EPHA7... [more]
SRK2_SPOLA3.666e-1628.02Tyrosine-protein kinase SRK2 (Fragment) OS=Spongil... [more]
OXSR1_MOUSE3.666e-1629.29Serine/threonine-protein kinase OSR1 OS=Mus muscul... [more]
M313B_XENLA3.666e-1634.18Mitogen-activated protein kinase kinase kinase 13-... [more]
ITK_MOUSE3.666e-1627.73Tyrosine-protein kinase ITK/TSK OS=Mus musculus GN... [more]
ITK_HUMAN3.666e-1627.73Tyrosine-protein kinase ITK/TSK OS=Homo sapiens GN... [more]
FRK_RAT3.666e-1628.69Tyrosine-protein kinase FRK OS=Rattus norvegicus G... [more]
FGR_HUMAN3.666e-1633.12Proto-oncogene tyrosine-protein kinase Fgr OS=Homo... [more]
BLK_HUMAN3.666e-1631.76Tyrosine-protein kinase Blk OS=Homo sapiens GN=BLK... [more]
LYN_MOUSE4.787e-1632.48Tyrosine-protein kinase Lyn OS=Mus musculus GN=Lyn... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAH2AF05RM1 PhII-IIIV1 Citrus clementina cDNA clone KN0AAH2AF05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929266 ID=FC929266; Name=FC929266; organism=Citrus clementina; type=EST; length=793bp
GTGAATTCTTATATGAGATAGCCATGATTTCGTGTTTGCAACACCCAAAT
CTTGTTAAAATTCATGGCTGTTGTGTTGAAGGGGATCAACTCTTGCTAGT
ATATGAATACATGGAAAACAACAGCCTTGCCCATGCTTTATTCGGTGGCG
AAAACAGTCAACTGAAATTGAACTGGCCAGTGAGGCAGAAGATCTGCCTT
GGGATAGCCAGAGGTTTAGCTTTTCTACATGAAGAATCCAGATTCAAAAT
AGTTCATAGAGACATCAAAGCTACGAATGTTCTGCTAGATAGAGATTTAA
ACCCCAAAATATCTGACTTTGGACTGGCTAAGCTTGATGAGGAGGAAAAA
ACTCACATCAGTACTCGAGTTGCTGGAACAATAGGATATATGGCACCAGA
GTACGCTCTATGGGGTTACTTGACCTACAAAGCAGATGTTTACAGTTTCG
GAGTTGTGGCTTTGGAAATCGTCAGTGGGAAGAATAATATGAGTTATGTG
CCAGACAGTAATTGCACCTGTCCTCTTGACTGGGCCTTCCATTTACACCG
AAGTGGTACGTTAATGGAGTTAGTGGATCCAAGGCTCGGATCAGAATTCA
ACAAGGTTGAAGCAGAGAGAATGATTAAAATAGCACTCTTATGCACCAAT
GCGTCACCTTCACTAAGGCCAACCATGTCTGAAGTGGTAAGCATGCTGGA
AGGATCTTCTAACATTCCGGATGTAATCCCTGAAGCCGGTGGTTTGAGTG
AAGACTTGAGGTTTAAAACTCTAAGAGAACATCCAAGAGAAAT
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