FC929266

Overview
NameFC929266
Unique NameFC929266
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length793
Libraries
Library NameType
PhII-IIIV1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig9285 contig Ccv1_Contig9285:2..794. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC929266 vs. ExPASy Swiss-Prot
Match: EPHA2_HUMAN (Ephrin type-A receptor 2 OS=Homo sapiens GN=EPHA2 PE=1 SV=2)

HSP 1 Score: 82.0333 bits (201), Expect = 4.053e-15
Identity = 75/279 (26.88%), Postives = 134/279 (48.03%), Query Frame = 3
Query:    3 EFLYEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALF--GGENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKL--DEEEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHRSGTLMELVDP--RLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLEGSSNIPDV--------------IPEAGGLSEDLRFKTLRE 779
            +FL E  ++    H N++++ G   +   ++++ EYMEN +L   L    GE S L+L   +R     GIA G+ +L   +    VHRD+ A N+L++ +L  K+SDFGL+++  D+ E T+ ++     I + APE   +   T  +DV+SFG+V  E+++      Y           W    H    +M+ ++   RL +  +   A  + ++ + C     + RP  +++VS+L+     PD               +P   G SE + F+T+ E
Sbjct:  659 DFLGEAGIMGQFSHHNIIRLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLR-----GIAAGMKYL---ANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMT-YGERPY-----------WELSNHE---VMKAINDGFRLPTPMDCPSA--IYQLMMQCWQQERARRPKFADIVSILDKLIRAPDSLKTLADFDPRVSIRLPSTSG-SEGVPFRTVSE 911          
BLAST of FC929266 vs. ExPASy Swiss-Prot
Match: CIPKF_ARATH (CBL-interacting serine/threonine-protein kinase 15 OS=Arabidopsis thaliana GN=CIPK15 PE=1 SV=2)

HSP 1 Score: 82.0333 bits (201), Expect = 4.053e-15
Identity = 58/170 (34.12%), Postives = 89/170 (52.35%), Query Frame = 3
Query:   15 EIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALFGGENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKL-DEEEKTHISTRVAGTIGYMAPE-YALWGYLTYKADVYSFGVVALEIVSGKNNMSYVP--DSN 512
            EI+ +  L+HPN+V++H       ++  V E+++   L + +  G     KL   V +K    + R + F H      + HRD+K  N+LLD   N KISDFGL+ L D   +  +     GT  Y+APE  +  GY  +KADV+S GV+   +++G     Y+P  DSN
Sbjct:   60 EISAMRLLRHPNIVELHEVMATKSKIYFVMEHVKGGELFNKVSTG-----KLREDVARKYFQQLVRAVDFCHSRG---VCHRDLKPENLLLDEHGNLKISDFGLSALSDSRRQDGLLHTTCGTPAYVAPEVISRNGYDGFKADVWSCGVILFVLLAG-----YLPFRDSN 216          
BLAST of FC929266 vs. ExPASy Swiss-Prot
Match: IRAK2_RAT (Interleukin-1 receptor-associated kinase-like 2 OS=Rattus norvegicus GN=Irak2 PE=2 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 5.293e-15
Identity = 49/155 (31.61%), Postives = 79/155 (50.97%), Query Frame = 3
Query:   33 CLQ--HPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALFGGENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEEEKTHISTR----VAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSG 479
            CL+  HPN++ + G C       L+Y YM N SL   L+   +S + L+WP R  IC G+   +  LH      I+H ++K+ NVLLD+ LNPK++          +KT  +         +  Y+   +   G LT + D++S G+V  E+++G
Sbjct:  261 CLRCCHPNILPLLGFCTGRQFHSLIYPYMANGSLQDRLWAQGDSDM-LSWPQRASICSGLLLAVEHLHS---LDIIHSNVKSANVLLDQHLNPKLAHPVAHPCPTNKKTKYTVMKTHLFQASAAYLPENFIRVGQLTKQVDIFSCGIVLAEVLTG 411          
BLAST of FC929266 vs. ExPASy Swiss-Prot
Match: FRK_HUMAN (Tyrosine-protein kinase FRK OS=Homo sapiens GN=FRK PE=1 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 5.293e-15
Identity = 67/237 (28.27%), Postives = 109/237 (45.99%), Query Frame = 3
Query:    3 EFLYEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALFGGENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLA---KLDEEEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVS-GKNNMSYVPDSNCTCPLDWAFHLHRSGTLMELVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLE 701
            +FL E  ++  L+HP L++++  C   D + ++ E M + SL   L     S++ L   V   +   +A G+A+L  ESR   +HRD+ A NVL+      K++DFGLA   K+D E+       +   + + APE       + K+DV+SFG++  EI++ GK   S +  +     L   + L +                     ++   I L C NA P  RPT   +   LE
Sbjct:  273 DFLREAQIMKNLRHPKLIQLYAVCTLEDPIYIITELMRHGSLQEYLQNDTGSKIHLTQQV--DMAAQVASGMAYL--ESR-NYIHRDLAARNVLVGEHNIYKVADFGLARVFKVDNEDIYESRHEIKLPVKWTAPEAIRSNKFSIKSDVWSFGILLYEIITYGKMPYSGMTGAQVIQMLAQNYRLPQPSNC----------------PQQFYNIMLECWNAEPKERPTFETLRWKLE 488          
BLAST of FC929266 vs. ExPASy Swiss-Prot
Match: FGFR4_RAT (Fibroblast growth factor receptor 4 OS=Rattus norvegicus GN=Fgfr4 PE=2 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 5.293e-15
Identity = 75/250 (30.00%), Postives = 120/250 (48.00%), Query Frame = 3
Query:    3 EFLYEIAMISCL-QHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALF------------GGENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAK----LDEEEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHRSGTLMELVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLE 701
            + + E+ M+  + +H N++ + G C +   L ++ EY    +L   L             G  +S+  L++P        +ARG+ +L  ESR K +HRD+ A NVL+  D   KI+DFGLA+    +D  +KT   +     + +MAPE       T+++DV+SFG++  EI +     S  P      P++  F L R G  ME   P   SE   +  E        C +A+PS RPT  ++V  L+
Sbjct:  514 DLISEMEMMKLIGRHKNIINLLGVCTQEGPLYVIVEYAAKGNLREFLRARRPPGPDLSPDGPRSSEGPLSFPALVSCAYQVARGMQYL--ESR-KCIHRDLAARNVLVTEDDVMKIADFGLARGVHHIDYYKKT---SNGRLPVKWMAPEALFDRVYTHQSDVWSFGILLWEIFT--LGGSPYPG----IPVEELFSLLREGHRMER-PPNCPSELYGLMRE--------CWHAAPSQRPTFKQLVEALD 742          
BLAST of FC929266 vs. ExPASy Swiss-Prot
Match: ERBB4_MOUSE (Receptor tyrosine-protein kinase erbB-4 OS=Mus musculus GN=Erbb4 PE=1 SV=3)

HSP 1 Score: 81.6481 bits (200), Expect = 5.293e-15
Identity = 56/162 (34.57%), Postives = 92/162 (56.79%), Query Frame = 3
Query:    3 EFLYEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSL---AHALFGGENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDE-EEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVS 476
            EF+ E  +++ + HP+LV++ G C+    + LV + M +  L    H       SQL LNW      C+ IA+G+ +L E    ++VHRD+ A NVL+    + KI+DFGLA+L E +EK + +      I +MA E   +   T+++DV+S+GV   E+++
Sbjct:  764 EFMDEALIMASMDHPHLVRLLGVCLS-PTIQLVTQLMPHGCLLDYVHEHKDNIGSQLLLNW------CVQIAKGMMYLEER---RLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMT 915          
BLAST of FC929266 vs. ExPASy Swiss-Prot
Match: ERBB4_HUMAN (Receptor tyrosine-protein kinase erbB-4 OS=Homo sapiens GN=ERBB4 PE=1 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 5.293e-15
Identity = 56/162 (34.57%), Postives = 92/162 (56.79%), Query Frame = 3
Query:    3 EFLYEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSL---AHALFGGENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDE-EEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVS 476
            EF+ E  +++ + HP+LV++ G C+    + LV + M +  L    H       SQL LNW      C+ IA+G+ +L E    ++VHRD+ A NVL+    + KI+DFGLA+L E +EK + +      I +MA E   +   T+++DV+S+GV   E+++
Sbjct:  764 EFMDEALIMASMDHPHLVRLLGVCLS-PTIQLVTQLMPHGCLLEYVHEHKDNIGSQLLLNW------CVQIAKGMMYLEER---RLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMT 915          
BLAST of FC929266 vs. ExPASy Swiss-Prot
Match: EPHA5_HUMAN (Ephrin type-A receptor 5 OS=Homo sapiens GN=EPHA5 PE=1 SV=3)

HSP 1 Score: 81.6481 bits (200), Expect = 5.293e-15
Identity = 54/162 (33.33%), Postives = 91/162 (56.17%), Query Frame = 3
Query:    3 EFLYEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALF--GGENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEEEKTHISTRVAG--TIGYMAPEYALWGYLTYKADVYSFGVVALEIVS 476
            +FL E +++    HPN++ + G   +   +++V EYMEN SL   L    G+ + ++L   +R     GI+ G+ +L   S    VHRD+ A N+L++ +L  K+SDFGL+++ E++     T   G   I + APE   +   T  +DV+S+G+V  E+VS
Sbjct:  720 DFLGEASIMGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDTFLKKNDGQFTVIQLVGMLR-----GISAGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAFRKFTSASDVWSYGIVMWEVVS 873          
BLAST of FC929266 vs. ExPASy Swiss-Prot
Match: EPHA2_MOUSE (Ephrin type-A receptor 2 OS=Mus musculus GN=Epha2 PE=1 SV=2)

HSP 1 Score: 81.6481 bits (200), Expect = 5.293e-15
Identity = 75/279 (26.88%), Postives = 134/279 (48.03%), Query Frame = 3
Query:    3 EFLYEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALF--GGENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKL--DEEEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHRSGTLMELVDP--RLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLEGSSNIPDV--------------IPEAGGLSEDLRFKTLRE 779
            +FL E +++    H N++ + G   +   ++++ EYMEN +L   L    GE S L+L   +R     GIA G+ +L   +    VHRD+ A N+L++ +L  K+SDFGL+++  D+ E T+ ++     I + APE   +   T  +DV+S+G+V  E+++      Y           W    H    +M+ ++   RL +  +   A  + ++ + C     S RP  +++VS+L+     PD               +P   G SE + F+T+ E
Sbjct:  660 DFLSEASIMGQFSHHNIIPLEGVVSKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLR-----GIASGMKYL---ANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSYGIVMWEVMT-YGERPY-----------WELSNHE---VMKAINDGFRLPTPMDCPSA--IYQLMMQCWQQERSRRPKFADIVSILDKLIRAPDSLKTLADFDPRVSIRLPSTSG-SEGVPFRTVSE 912          
BLAST of FC929266 vs. ExPASy Swiss-Prot
Match: EPA4A_DANRE (Ephrin type-A receptor 4a (Fragment) OS=Danio rerio GN=epha4a PE=2 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 5.293e-15
Identity = 67/261 (25.67%), Postives = 128/261 (49.04%), Query Frame = 3
Query:    3 EFLYEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHAL--FGGENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEE--EKTHISTRVAGT---------IGYMAPEYALWGYLTYKADVYSFGVVALEIVS-GKNNMSYVPDSNCTCPLDWAFHLHRSGTLMELVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLEGSSNIPDVIPEAGG 743
            +FL E +++    HPN++++ G   +   ++++ EYMEN SL   L    G  + ++L   +R     GIA G+ +L + S    VHRD+ A N+L++ +L  K+SDFG++++ EE  +  + +  + GT         I + APE   +   T  +DV+S+G+V  E++S G+     + + +    ++  + L           P +    +      + ++ L C     + RP  S++V+ML+     P+ +   GG
Sbjct:   40 DFLSEASIMGQFDHPNIIRLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGILR-----GIASGMKYLSDMS---YVHRDLAARNILVNSNLVCKVSDFGMSRVLEEDPDAAYTTREITGTYQSQGGKIPIRWTAPEAITYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEEGYRL----------PPPMDCPVS------LHQLMLDCWQKERAERPKFSQIVNMLDKLIRNPNSLKRTGG 276          
The following BLAST results are available for this feature:
BLAST of FC929266 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
EPHA2_HUMAN4.053e-1526.88Ephrin type-A receptor 2 OS=Homo sapiens GN=EPHA2 ... [more]
CIPKF_ARATH4.053e-1534.12CBL-interacting serine/threonine-protein kinase 15... [more]
IRAK2_RAT5.293e-1531.61Interleukin-1 receptor-associated kinase-like 2 OS... [more]
FRK_HUMAN5.293e-1528.27Tyrosine-protein kinase FRK OS=Homo sapiens GN=FRK... [more]
FGFR4_RAT5.293e-1530.00Fibroblast growth factor receptor 4 OS=Rattus norv... [more]
ERBB4_MOUSE5.293e-1534.57Receptor tyrosine-protein kinase erbB-4 OS=Mus mus... [more]
ERBB4_HUMAN5.293e-1534.57Receptor tyrosine-protein kinase erbB-4 OS=Homo sa... [more]
EPHA5_HUMAN5.293e-1533.33Ephrin type-A receptor 5 OS=Homo sapiens GN=EPHA5 ... [more]
EPHA2_MOUSE5.293e-1526.88Ephrin type-A receptor 2 OS=Mus musculus GN=Epha2 ... [more]
EPA4A_DANRE5.293e-1525.67Ephrin type-A receptor 4a (Fragment) OS=Danio reri... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAH2AF05RM1 PhII-IIIV1 Citrus clementina cDNA clone KN0AAH2AF05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929266 ID=FC929266; Name=FC929266; organism=Citrus clementina; type=EST; length=793bp
GTGAATTCTTATATGAGATAGCCATGATTTCGTGTTTGCAACACCCAAAT
CTTGTTAAAATTCATGGCTGTTGTGTTGAAGGGGATCAACTCTTGCTAGT
ATATGAATACATGGAAAACAACAGCCTTGCCCATGCTTTATTCGGTGGCG
AAAACAGTCAACTGAAATTGAACTGGCCAGTGAGGCAGAAGATCTGCCTT
GGGATAGCCAGAGGTTTAGCTTTTCTACATGAAGAATCCAGATTCAAAAT
AGTTCATAGAGACATCAAAGCTACGAATGTTCTGCTAGATAGAGATTTAA
ACCCCAAAATATCTGACTTTGGACTGGCTAAGCTTGATGAGGAGGAAAAA
ACTCACATCAGTACTCGAGTTGCTGGAACAATAGGATATATGGCACCAGA
GTACGCTCTATGGGGTTACTTGACCTACAAAGCAGATGTTTACAGTTTCG
GAGTTGTGGCTTTGGAAATCGTCAGTGGGAAGAATAATATGAGTTATGTG
CCAGACAGTAATTGCACCTGTCCTCTTGACTGGGCCTTCCATTTACACCG
AAGTGGTACGTTAATGGAGTTAGTGGATCCAAGGCTCGGATCAGAATTCA
ACAAGGTTGAAGCAGAGAGAATGATTAAAATAGCACTCTTATGCACCAAT
GCGTCACCTTCACTAAGGCCAACCATGTCTGAAGTGGTAAGCATGCTGGA
AGGATCTTCTAACATTCCGGATGTAATCCCTGAAGCCGGTGGTTTGAGTG
AAGACTTGAGGTTTAAAACTCTAAGAGAACATCCAAGAGAAAT
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