FC929266

Overview
NameFC929266
Unique NameFC929266
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length793
Libraries
Library NameType
PhII-IIIV1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC929266 vs. ExPASy Swiss-Prot
Match: STE11_YEAS6 (Serine/threonine-protein kinase STE11 OS=Saccharomyces cerevisiae (strain AWRI1631) GN=STE11 PE=3 SV=2)

HSP 1 Score: 80.4925 bits (197), Expect = 1.179e-14
Identity = 55/164 (33.54%), Postives = 92/164 (56.10%), Query Frame = 3
Query:   12 YEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHAL--FGGENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAK----LDEEEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKN 485
            +E+ ++  L H N+V  +G   EG  L +  EY+   S++  L  +G     L  N+  RQ     I  G+A+LH++   KI+HRDIK  N+L+D     KI+DFG++K    L++++    S  + G++ +M+PE       T KAD++S G V +E+ +GK+
Sbjct:  503 HEMNLLKELHHENIVTYYGASQEGGNLNIFLEYVPGGSVSSMLNNYGPFEESLITNF-TRQ-----ILIGVAYLHKK---KIIHRDIKGANILIDIKGCVKITDFGISKKLSPLNKKQNKRAS--LQGSVFWMSPEVVKQSATTAKADIWSTGCVVIEMFTGKH 655          
BLAST of FC929266 vs. ExPASy Swiss-Prot
Match: SRC42_DROME (Tyrosine-protein kinase Src42A OS=Drosophila melanogaster GN=Src42A PE=1 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.179e-14
Identity = 49/160 (30.63%), Postives = 88/160 (55.00%), Query Frame = 3
Query:    3 EFLYEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHAL--FGGENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEEEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVS 476
            +FL E  ++  L+H  L++++  C   + + ++ E M++ SL   L    G+   LK+   +   +   IA G+A+L  ++    +HRD+ A NVL+      KI+DFGLA+L +E++          I + APE A +   + K+DV+SFG++  E+V+
Sbjct:  287 DFLAEAQIMKKLRHTKLIQLYAVCTVEEPIYIITELMKHGSLLEYLQAIAGKGRSLKMQTLI--DMAAQIAAGMAYLESQN---YIHRDLAARNVLVGDGNIVKIADFGLARLIKEDEYEARVGARFPIKWTAPEAANYSKFSIKSDVWSFGILLTELVT 441          
BLAST of FC929266 vs. ExPASy Swiss-Prot
Match: NTRK2_RAT (BDNF/NT-3 growth factors receptor OS=Rattus norvegicus GN=Ntrk2 PE=1 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.179e-14
Identity = 54/166 (32.53%), Postives = 85/166 (51.20%), Query Frame = 3
Query:    3 EFLYEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSL-----AH----ALFGGENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAK-LDEEEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEI 470
            +F  E  +++ LQH ++VK +G CVEGD L++V+EYM++  L     AH     L    N   +L       I   IA G+ +L  +     VHRD+   N L+  +L  KI DFG+++ +   +   +       I +M PE  ++   T ++DV+S GVV  EI
Sbjct:  583 DFHREAELLTNLQHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQ---HFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEI 745          
BLAST of FC929266 vs. ExPASy Swiss-Prot
Match: NTRK2_MOUSE (BDNF/NT-3 growth factors receptor OS=Mus musculus GN=Ntrk2 PE=1 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.179e-14
Identity = 54/166 (32.53%), Postives = 85/166 (51.20%), Query Frame = 3
Query:    3 EFLYEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSL-----AH----ALFGGENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAK-LDEEEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEI 470
            +F  E  +++ LQH ++VK +G CVEGD L++V+EYM++  L     AH     L    N   +L       I   IA G+ +L  +     VHRD+   N L+  +L  KI DFG+++ +   +   +       I +M PE  ++   T ++DV+S GVV  EI
Sbjct:  583 DFHREAELLTNLQHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQ---HFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEI 745          
BLAST of FC929266 vs. ExPASy Swiss-Prot
Match: NTRK2_HUMAN (BDNF/NT-3 growth factors receptor OS=Homo sapiens GN=NTRK2 PE=1 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.179e-14
Identity = 54/166 (32.53%), Postives = 85/166 (51.20%), Query Frame = 3
Query:    3 EFLYEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSL-----AH----ALFGGENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAK-LDEEEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEI 470
            +F  E  +++ LQH ++VK +G CVEGD L++V+EYM++  L     AH     L    N   +L       I   IA G+ +L  +     VHRD+   N L+  +L  KI DFG+++ +   +   +       I +M PE  ++   T ++DV+S GVV  EI
Sbjct:  584 DFHREAELLTNLQHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQ---HFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEI 746          
BLAST of FC929266 vs. ExPASy Swiss-Prot
Match: NTRK2_CHICK (BDNF/NT-3 growth factors receptor OS=Gallus gallus GN=NTRK2 PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.179e-14
Identity = 54/166 (32.53%), Postives = 85/166 (51.20%), Query Frame = 3
Query:    3 EFLYEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSL-----AH----ALFGGENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAK-LDEEEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEI 470
            +F  E  +++ LQH ++VK +G CVEGD L++V+EYM++  L     AH     L    N   +L       I   IA G+ +L  +     VHRD+   N L+  +L  KI DFG+++ +   +   +       I +M PE  ++   T ++DV+S GVV  EI
Sbjct:  580 DFHREAELLTNLQHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQ---HFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEI 742          
BLAST of FC929266 vs. ExPASy Swiss-Prot
Match: MRH1_ARATH (Probable LRR receptor-like serine/threonine-protein kinase MRH1 OS=Arabidopsis thaliana GN=MRH1 PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.179e-14
Identity = 71/239 (29.71%), Postives = 109/239 (45.61%), Query Frame = 3
Query:   15 EIAMISCLQHPNLVKIHGCCVEGDQL--LLVYEYMENNSLAHALFGGENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISD--FGL-AKLDEEEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHRSGTLMELVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLEGSSNI 716
            +I  +S + H N V + G C E D    ++V+EY  N +L   L   E   L  +W  R +I +G A  L  +H  +   + H D  ++ + L  D   K+S+  F L A+L+   K H+S  +  T   + PE         +A+V+SFGV+ LEI+SGK + S            WA        L E++DP L   F + E E +  +   C       RP+M +V   L+   NI
Sbjct:  433 KIDTLSRINHKNFVNLIGYCEEDDPFNRMMVFEYAPNGTLFEHLHDKETEHL--DWSARMRIIMGTAYCLQHMHGMNP-PMAHTDFNSSEIYLTDDYAAKVSEIPFNLEARLNP--KKHVSGDLEQTSLLLPPEP--------EANVHSFGVLMLEIISGKLSFS----DEYGSIEQWASKYLEKDDLGEMIDPSL-KTFKEEELEVICDVIRECLKTEQRQRPSMKDVAEQLKQVINI 653          
BLAST of FC929266 vs. ExPASy Swiss-Prot
Match: EPHA2_MACFA (Ephrin type-A receptor 2 OS=Macaca fascicularis GN=EPHA2 PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.179e-14
Identity = 74/279 (26.52%), Postives = 134/279 (48.03%), Query Frame = 3
Query:    3 EFLYEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALF--GGENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKL--DEEEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHRSGTLMELVDP--RLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLEGSSNIPDV--------------IPEAGGLSEDLRFKTLRE 779
            +FL E  ++    H N++++ G   +   ++++ E+MEN +L   L    GE S L+L   +R     GIA G+ +L   +    VHRD+ A N+L++ +L  K+SDFGL+++  D+ E T+ ++     I + APE   +   T  +DV+SFG+V  E+++      Y           W    H    +M+ ++   RL +  +   A  + ++ + C     + RP  +++VS+L+     PD               +P   G SE + F+T+ E
Sbjct:  659 DFLGEAGIMGQFSHHNIIRLEGVISKYKPMMIITEFMENGALDKFLREKDGEFSVLQLVGMLR-----GIAAGMKYL---ANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMT-YGERPY-----------WELSNHE---VMKAINDGFRLPTPMDCPSA--IYQLMMQCWQQERARRPKFADIVSILDKLIRAPDSLKTLADFDPRVSIRLPSTSG-SEGVPFRTVSE 911          
BLAST of FC929266 vs. ExPASy Swiss-Prot
Match: BTKL_DROME (Tyrosine-protein kinase Btk29A OS=Drosophila melanogaster GN=Btk29A PE=1 SV=2)

HSP 1 Score: 80.4925 bits (197), Expect = 1.179e-14
Identity = 47/156 (30.13%), Postives = 89/156 (57.05%), Query Frame = 3
Query:    3 EFLYEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALFGGENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEEEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEI 470
            +F+ E  +++ LQHPNLV+++G C +   + +V EYM++ SL + L   E + +  N  +   +C+ +++G+ +L    R   +HRD+ A N L+  +   K++DFGLA+   +++   S      I +  PE   +   + K+DV+++GV+  EI
Sbjct:  565 DFIEEAKVMTKLQHPNLVQLYGVCSKHRPIYIVTEYMKHGSLLNYLRRHEKTLIG-NMGLLLDMCIQVSKGMTYLE---RHNYIHRDLAARNCLVGSENVVKVADFGLARYVLDDQYTSSGGTKFPIKWAPPEVLNYTRFSSKSDVWAYGVLMWEI 716          
BLAST of FC929266 vs. ExPASy Swiss-Prot
Match: Y9848_DICDI (Probable serine/threonine-protein kinase DDB_G0272092 OS=Dictyostelium discoideum GN=DDB_G0272092 PE=2 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.540e-14
Identity = 49/156 (31.41%), Postives = 79/156 (50.64%), Query Frame = 3
Query:    3 EFLYEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALFGGENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEEEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEI 470
            EF  E  ++S L+ P +V  HG  ++ D+L +V EY    SL H L   ++   +  W     +       L  LH  +  +++HRD+K+ N+L+  +   KI DFGL++ D         ++ GT  Y+APE       T K+DVYS G++  E+
Sbjct:  641 EFKKEFQIVSALRAPGVVYFHGAGIK-DKLCIVMEYCSRGSLYHIL---KDDTTQFTWDNFFNLGTQAINSLDSLHNWTP-QVLHRDLKSLNLLVTENWTVKICDFGLSRFDTGSNLETLGKLRGTYAYVAPEVYFGKKYTTKSDVYSMGIILWEM 791          
The following BLAST results are available for this feature:
BLAST of FC929266 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
STE11_YEAS61.179e-1433.54Serine/threonine-protein kinase STE11 OS=Saccharom... [more]
SRC42_DROME1.179e-1430.63Tyrosine-protein kinase Src42A OS=Drosophila melan... [more]
NTRK2_RAT1.179e-1432.53BDNF/NT-3 growth factors receptor OS=Rattus norveg... [more]
NTRK2_MOUSE1.179e-1432.53BDNF/NT-3 growth factors receptor OS=Mus musculus ... [more]
NTRK2_HUMAN1.179e-1432.53BDNF/NT-3 growth factors receptor OS=Homo sapiens ... [more]
NTRK2_CHICK1.179e-1432.53BDNF/NT-3 growth factors receptor OS=Gallus gallus... [more]
MRH1_ARATH1.179e-1429.71Probable LRR receptor-like serine/threonine-protei... [more]
EPHA2_MACFA1.179e-1426.52Ephrin type-A receptor 2 OS=Macaca fascicularis GN... [more]
BTKL_DROME1.179e-1430.13Tyrosine-protein kinase Btk29A OS=Drosophila melan... [more]
Y9848_DICDI1.540e-1431.41Probable serine/threonine-protein kinase DDB_G0272... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAH2AF05RM1 PhII-IIIV1 Citrus clementina cDNA clone KN0AAH2AF05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929266 ID=FC929266; Name=FC929266; organism=Citrus clementina; type=EST; length=793bp
GTGAATTCTTATATGAGATAGCCATGATTTCGTGTTTGCAACACCCAAAT
CTTGTTAAAATTCATGGCTGTTGTGTTGAAGGGGATCAACTCTTGCTAGT
ATATGAATACATGGAAAACAACAGCCTTGCCCATGCTTTATTCGGTGGCG
AAAACAGTCAACTGAAATTGAACTGGCCAGTGAGGCAGAAGATCTGCCTT
GGGATAGCCAGAGGTTTAGCTTTTCTACATGAAGAATCCAGATTCAAAAT
AGTTCATAGAGACATCAAAGCTACGAATGTTCTGCTAGATAGAGATTTAA
ACCCCAAAATATCTGACTTTGGACTGGCTAAGCTTGATGAGGAGGAAAAA
ACTCACATCAGTACTCGAGTTGCTGGAACAATAGGATATATGGCACCAGA
GTACGCTCTATGGGGTTACTTGACCTACAAAGCAGATGTTTACAGTTTCG
GAGTTGTGGCTTTGGAAATCGTCAGTGGGAAGAATAATATGAGTTATGTG
CCAGACAGTAATTGCACCTGTCCTCTTGACTGGGCCTTCCATTTACACCG
AAGTGGTACGTTAATGGAGTTAGTGGATCCAAGGCTCGGATCAGAATTCA
ACAAGGTTGAAGCAGAGAGAATGATTAAAATAGCACTCTTATGCACCAAT
GCGTCACCTTCACTAAGGCCAACCATGTCTGAAGTGGTAAGCATGCTGGA
AGGATCTTCTAACATTCCGGATGTAATCCCTGAAGCCGGTGGTTTGAGTG
AAGACTTGAGGTTTAAAACTCTAAGAGAACATCCAAGAGAAAT
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