FC929266

Overview
NameFC929266
Unique NameFC929266
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length793
Libraries
Library NameType
PhII-IIIV1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig9285 contig Ccv1_Contig9285:2..794. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC929266 vs. ExPASy Swiss-Prot
Match: STK25_HUMAN (Serine/threonine-protein kinase 25 OS=Homo sapiens GN=STK25 PE=1 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.540e-14
Identity = 63/225 (28.00%), Postives = 106/225 (47.11%), Query Frame = 3
Query:   15 EIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALFGGENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEEEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHRSGTLMELVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVV 689
            EI ++S    P + +  G  ++  +L ++ EY+   S    L  G   +  +   +R+     I +GL +LH E +   +HRDIKA NVLL    + K++DFG+A    + +   +T V GT  +MAPE        +KAD++S G+ A+E+  G+      P ++   P+   F + ++        P L  + +K   E        C N  P  RPT  E++
Sbjct:   66 EITVLSQCDSPYITRYFGSYLKSTKLWIIMEYLGGGSALDLLKPGPLEETYIATILRE-----ILKGLDYLHSERK---IHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFV-GTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGE------PPNSDLHPMRVLFLIPKNS------PPTLEGQHSKPFKE----FVEACLNKDPRFRPTAKELL 265          
BLAST of FC929266 vs. ExPASy Swiss-Prot
Match: PYK4_DICDI (Dual specificity protein kinase pyk4 OS=Dictyostelium discoideum GN=pyk4 PE=1 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.540e-14
Identity = 58/192 (30.21%), Postives = 94/192 (48.96%), Query Frame = 3
Query:    6 FLYEIAMISCLQHPNLVKIHGCCVEGDQL----LLVYEYMENNSLAHALFGGENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLD---------------------RDLNPKISDFGLAKLDEEEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVS-GKNNMSYVP 503
            F +E+ +IS L+HPN+V+    C++ D       +V E+M   +L+  +   E   L++N  +R KI L IA+G+ + H +    I+HRD+ + NVLL+                      ++  K+ DFGL+    E K        G+I YMAPE      +  K+D+YSFG++  ++ S    N  Y P
Sbjct:  342 FYHEVLIISNLRHPNIVQFIAACIKFDNKEVNHCIVSEWMSGGNLSQFI-SNERKILEINPHLRVKILLDIAKGMLYSHRQG---IIHRDLTSNNVLLNFRKKKLLNNNSSNNDEQFYDSDEIIAKVCDFGLSSNQSESKK----LRGGSIHYMAPENLNGSPINEKSDIYSFGLLVWQMFSYASPNTIYSP 525          
BLAST of FC929266 vs. ExPASy Swiss-Prot
Match: MATK_HUMAN (Megakaryocyte-associated tyrosine-protein kinase OS=Homo sapiens GN=MATK PE=1 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.540e-14
Identity = 56/157 (35.67%), Postives = 88/157 (56.05%), Query Frame = 3
Query:    6 FLYEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALFGGENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEEEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVS 476
            FL E A+++ +QH NLV++ G  +    L +V E++   +L + L      +  +N     +  L +A G+ +L  +   K+VHRD+ A N+L+  DL  K+SDFGLAK   E K   S+R+   + + APE    G  T K+DV+SFGV+  E+ S
Sbjct:  273 FLDETAVMTKMQHENLVRLLGVILH-QGLYIVMEHVSKGNLVNFL--RTRGRALVNTAQLLQFSLHVAEGMEYLESK---KLVHRDLAARNILVSEDLVAKVSDFGLAK--AERKGLDSSRL--PVKWTAPEALKHGKFTSKSDVWSFGVLLWEVFS 419          
BLAST of FC929266 vs. ExPASy Swiss-Prot
Match: M2K1_ORYSJ (Mitogen-activated protein kinase kinase 1 OS=Oryza sativa subsp. japonica GN=MEK1 PE=1 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.540e-14
Identity = 54/168 (32.14%), Postives = 85/168 (50.60%), Query Frame = 3
Query:    3 EFLYEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALFGGENSQLK-LNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEEEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVP 503
            + + E+ +    Q+ ++V  H        + LV EYM+  SLA  +      Q+K +  P    +C  +  GL +LH E    ++HRDIK +N+L++R    KI+DFG++ +         T V GT  YMAPE        YK+D++S G+V LE   G+    Y+P
Sbjct:  113 QIVQELKINQATQNAHIVLCHQSFYHNGVIYLVLEYMDRGSLADII-----KQVKTILEPYLAVLCKQVLEGLLYLHHERH--VIHRDIKPSNLLVNRKGEVKITDFGVSAVLASSMGQRDTFV-GTYNYMAPERISGSSYDYKSDIWSLGLVILECAIGR--FPYIP 270          
BLAST of FC929266 vs. ExPASy Swiss-Prot
Match: TXK_MOUSE (Tyrosine-protein kinase TXK OS=Mus musculus GN=Txk PE=1 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 2.011e-14
Identity = 63/234 (26.92%), Postives = 110/234 (47.01%), Query Frame = 3
Query:    3 EFLYEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALFGGENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEEEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTC--PLDWAFHLHRSGTLMELVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSML 698
            +F+ E  ++  L H  LV+++G C++   L +V E+MEN  L   L      + +L   +   +C  I  G+A+L    R   +HRD+ A N L+      KISDFG+A+   +++   S+     + +  PE   +   + K+DV+SFGV+  E+ + +  M +   SN      +   F L+R         P L           + ++   C + SP  RPT +E++ +L
Sbjct:  310 DFIEEAKVMMKLSHSRLVQLYGVCIQQKPLYIVTEFMENGCLLDYL---RERKGQLQKALLLSMCQDICEGMAYLE---RSCYIHRDLAARNCLVSSACVVKISDFGMARYVLDDEYISSSGAKFPVKWCPPEVFHFNKYSSKSDVWSFGVLMWEVFT-EGKMPFENKSNLQVVEAISQGFRLYR---------PHLA-------PMTIYRVMYSCWHESPKGRPTFAELLQVL 520          
BLAST of FC929266 vs. ExPASy Swiss-Prot
Match: ROR1_DROME (Tyrosine-protein kinase transmembrane receptor Ror OS=Drosophila melanogaster GN=Ror PE=1 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 2.011e-14
Identity = 55/160 (34.38%), Postives = 87/160 (54.37%), Query Frame = 3
Query:    3 EFLYEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALFGGENSQLK-LNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAK-LDEEEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVS 476
            +F  EI +IS L+H N+V I G  +  +   +++EYM N  L   L     ++ K L+     +I L I+ G+ +L   S    VHRD+ A N L++  L  KISDFGL++ +   +   + ++    + +M  E  L+G  T ++DV+SFGVV  EI S
Sbjct:  455 DFKREIELISDLKHQNIVCILGVVLNKEPYCMLFEYMANGDLHEFLISNSPTEGKSLSQLEFLQIALQISEGMQYL---SAHHYVHRDLAARNCLVNEGLVVKISDFGLSRDIYSSDYYRVQSKSLLPVRWMPSESILYGKFTTESDVWSFGVVLWEIYS 611          
BLAST of FC929266 vs. ExPASy Swiss-Prot
Match: RIPK4_MOUSE (Receptor-interacting serine/threonine-protein kinase 4 OS=Mus musculus GN=Ripk4 PE=1 SV=2)

HSP 1 Score: 79.7221 bits (195), Expect = 2.011e-14
Identity = 74/244 (30.33%), Postives = 110/244 (45.08%), Query Frame = 3
Query:    3 EFLYEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALFGGENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEEEKTHISTR--VAGTIGYMAPEYALWGYLTY--KADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHRSGTLMELVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLEGSSNIPD 722
            E L E   +   +   ++ ++G C E   + LV EYME  SL   L     +   L W +R +I    A G+ FLH  S   ++H D+K  N+LLD   + KISDFGLAK +    +H  +   + GTI Y+ PE        +  K DVYSF +V   +++ K    +  + N    +      HR   L  +  PR  +         +I +   C +A P +RPT  E+ S  E     PD
Sbjct:   65 ELLEEAKKMEMAKFRYILPVYGICQE--PVGLVMEYMETGSLEKLL-----ASEPLPWDLRFRIVHETAVGMNFLHCMSP-PLLHLDLKPANILLDAHYHVKISDFGLAKCNGMSHSHDLSMDGLFGTIAYLPPERIREKSRLFDTKHDVYSFAIVIWGVLTQKK--PFADEKNILHIMMKVVKGHRP-ELPPICRPRPRA------CASLIGLMQRCWHADPQVRPTFQEITSETEDLCEKPD 291          
BLAST of FC929266 vs. ExPASy Swiss-Prot
Match: PKN2_CLOAB (Probable serine/threonine-protein kinase CA_C1728 OS=Clostridium acetobutylicum GN=CA_C1728 PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 2.011e-14
Identity = 66/238 (27.73%), Postives = 113/238 (47.48%), Query Frame = 3
Query:    3 EFLYEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALFGGENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEEEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHRSGTLMELVDPRLGSEFNKVEAERMIKIALLCTNASPSLR-PTMSEVVSMLEGSSN 713
            +F  E +  + + + N+V I+    +G+   +V EY+   +L   +   EN +++ N  +       IA+ L F H+     IVHRDIK  N+++  D   K++DFG+AK   E     + +V G+  Y++PE A    +  + D+YSFG+V  E+ +GK  + Y  D+  +  L    H+  +      V P   +E NK     + K+ L C    P  R    +E++  L    N
Sbjct:   54 KFKREASAAARIANANIVNIYDVGADGNVNYIVMEYVAGKTLKKLI--KENGKIEFNKII--DYATQIAKALNFAHKNG---IVHRDIKPHNIMVTDDDIIKVTDFGIAKASNESTITTTNKVVGSAHYLSPEQAQGIPVDCRTDIYSFGIVLYEMATGK--VPYDADTPVSIALK---HIQDAA-----VPP---NELNKDIPIALNKMILRCIEKKPENRYQNANEILDELSNVKN 271          
BLAST of FC929266 vs. ExPASy Swiss-Prot
Match: EPHB4_MOUSE (Ephrin type-B receptor 4 OS=Mus musculus GN=Ephb4 PE=1 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 2.011e-14
Identity = 54/167 (32.34%), Postives = 96/167 (57.49%), Query Frame = 3
Query:    3 EFLYEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALFGGENSQLKLN---WPVRQKICL--GIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEEEKTH--ISTRVAG--TIGYMAPEYALWGYLTYKADVYSFGVVALEIVS 476
            EFL E +++   +HPN++++ G       ++++ E+MEN +L        +S L+LN   + V Q + +  GIA G+ +L E S    VHRD+ A N+L++ +L  K+SDFGL++  EE  +    ++ + G  +I + APE   +   T  +D +S+G+V  E++S
Sbjct:  660 EFLSEASIMGQFEHPNIIRLEGVVTNSVPVMILTEFMENGAL--------DSFLRLNDGQFTVIQLVGMLRGIASGMRYLAEMS---YVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGKISIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMS 815          
BLAST of FC929266 vs. ExPASy Swiss-Prot
Match: Y2579_ARATH (Probably inactive leucine-rich repeat receptor-like protein kinase At2g25790 OS=Arabidopsis thaliana GN=At2g25790 PE=1 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.627e-14
Identity = 59/226 (26.11%), Postives = 103/226 (45.58%), Query Frame = 3
Query:   42 HPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALFGGENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEEEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSY--VPDSNCTCPLDWAFHLHRSGTLMELVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLEGSSN 713
            H N++KI   C       L++E +E   L+  L G       L+W  R+KI  GI   L FLH      +V  ++   N+++D    P++   GL  L           +     YMAPE      +T K+D+Y FG++ L +++GK + S   +        + WA + + +  +   +D  + +  ++ E   ++ +AL CT   P  RP  + V+  LE +S+
Sbjct:  738 HKNILKIVATCRSETVAYLIHEDVEGKRLSQVLSG-------LSWERRRKIMKGIVEALRFLHCRCSPAVVAGNLSPENIVIDVTDEPRLC-LGLPGL-----------LCMDAAYMAPETREHKEMTSKSDIYGFGILLLHLLTGKCSSSNEDIESGVNGSLVKWARYSYSNCHIDTWIDSSIDTSVHQREIVHVMNLALKCTAIDPQERPCTNNVLQALESTSS 944          
The following BLAST results are available for this feature:
BLAST of FC929266 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
STK25_HUMAN1.540e-1428.00Serine/threonine-protein kinase 25 OS=Homo sapiens... [more]
PYK4_DICDI1.540e-1430.21Dual specificity protein kinase pyk4 OS=Dictyostel... [more]
MATK_HUMAN1.540e-1435.67Megakaryocyte-associated tyrosine-protein kinase O... [more]
M2K1_ORYSJ1.540e-1432.14Mitogen-activated protein kinase kinase 1 OS=Oryza... [more]
TXK_MOUSE2.011e-1426.92Tyrosine-protein kinase TXK OS=Mus musculus GN=Txk... [more]
ROR1_DROME2.011e-1434.38Tyrosine-protein kinase transmembrane receptor Ror... [more]
RIPK4_MOUSE2.011e-1430.33Receptor-interacting serine/threonine-protein kina... [more]
PKN2_CLOAB2.011e-1427.73Probable serine/threonine-protein kinase CA_C1728 ... [more]
EPHB4_MOUSE2.011e-1432.34Ephrin type-B receptor 4 OS=Mus musculus GN=Ephb4 ... [more]
Y2579_ARATH2.627e-1426.11Probably inactive leucine-rich repeat receptor-lik... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAH2AF05RM1 PhII-IIIV1 Citrus clementina cDNA clone KN0AAH2AF05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929266 ID=FC929266; Name=FC929266; organism=Citrus clementina; type=EST; length=793bp
GTGAATTCTTATATGAGATAGCCATGATTTCGTGTTTGCAACACCCAAAT
CTTGTTAAAATTCATGGCTGTTGTGTTGAAGGGGATCAACTCTTGCTAGT
ATATGAATACATGGAAAACAACAGCCTTGCCCATGCTTTATTCGGTGGCG
AAAACAGTCAACTGAAATTGAACTGGCCAGTGAGGCAGAAGATCTGCCTT
GGGATAGCCAGAGGTTTAGCTTTTCTACATGAAGAATCCAGATTCAAAAT
AGTTCATAGAGACATCAAAGCTACGAATGTTCTGCTAGATAGAGATTTAA
ACCCCAAAATATCTGACTTTGGACTGGCTAAGCTTGATGAGGAGGAAAAA
ACTCACATCAGTACTCGAGTTGCTGGAACAATAGGATATATGGCACCAGA
GTACGCTCTATGGGGTTACTTGACCTACAAAGCAGATGTTTACAGTTTCG
GAGTTGTGGCTTTGGAAATCGTCAGTGGGAAGAATAATATGAGTTATGTG
CCAGACAGTAATTGCACCTGTCCTCTTGACTGGGCCTTCCATTTACACCG
AAGTGGTACGTTAATGGAGTTAGTGGATCCAAGGCTCGGATCAGAATTCA
ACAAGGTTGAAGCAGAGAGAATGATTAAAATAGCACTCTTATGCACCAAT
GCGTCACCTTCACTAAGGCCAACCATGTCTGAAGTGGTAAGCATGCTGGA
AGGATCTTCTAACATTCCGGATGTAATCCCTGAAGCCGGTGGTTTGAGTG
AAGACTTGAGGTTTAAAACTCTAAGAGAACATCCAAGAGAAAT
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