FC929270
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC929270 vs. ExPASy Swiss-Prot
Match: SYN_PSEHT (Asparaginyl-tRNA synthetase OS=Pseudoalteromonas haloplanktis (strain TAC 125) GN=asnS PE=3 SV=1) HSP 1 Score: 214.927 bits (546), Expect = 4.277e-55 Identity = 102/191 (53.40%), Postives = 133/191 (69.63%), Query Frame = 3 Query: 9 LLDHCFDDMEFMAKNYDKSCINRLRMVASTPFERITYTXXXXXXXXXXKEGKHFENKVEWGIDLASEHERYLTEVKFQKPVIVYNYPKGIKAFYMRLNDDLKTVAAMDVLVPKVGELIGGSQREERYDVIKSRIEDMGLPLEPYEWYLDLRRFGTVKHSGFGLGFERMILFATGIDNIRDVIPFPRYPGRA 581 +L+ DDMEF A+ +K+ I RL F ++ YT GK FE VEWG+DL SEHERYL E F+ PV++ NYP+ IKAFYMR N+D KTVAAMD++ P +GE+IGGSQREER D++ +R+++MGL + Y WY DLR++GTV HSGFGLGFER++ + TG+ N+RDVI FPR G A Sbjct: 276 VLEERRDDMEFFAQRVEKTAITRLEEFVEKDFAQVDYTEAVEILKAC---GKKFEYAVEWGVDLQSEHERYLAEEHFKAPVVIKNYPRDIKAFYMRQNEDGKTVAAMDIVAPGIGEIIGGSQREERLDILDARLDEMGLNKDDYSWYRDLRKYGTVPHSGFGLGFERLVAYVTGMGNVRDVIAFPRTKGSA 463
BLAST of FC929270 vs. ExPASy Swiss-Prot
Match: SYN_MYXXD (Asparaginyl-tRNA synthetase OS=Myxococcus xanthus (strain DK 1622) GN=asnS PE=3 SV=1) HSP 1 Score: 214.542 bits (545), Expect = 5.586e-55 Identity = 105/191 (54.97%), Postives = 132/191 (69.11%), Query Frame = 3 Query: 9 LLDHCFDDMEFMAKNYDKSCINRLRMVASTPFERITYTXXXXXXXXXXKEGKHFENKVEWGIDLASEHERYLTEVKFQKPVIVYNYPKGIKAFYMRLNDDLKTVAAMDVLVPKVGELIGGSQREERYDVIKSRIEDMGLPLEPYEWYLDLRRFGTVKHSGFGLGFERMILFATGIDNIRDVIPFPRYPGRA 581 +L+ C D++F + K I R+ ++ FERI YT K K FE + EWG DL +EHERYLTE +PV+V NYP+ IK+FYMRLNDD KTVAAMDVL P +GE+IGGSQREER DV+ RI+ GL E Y+WY DLRR+G+V H+GFGLGFER+I++ G+ NIRD IP+PR PG A Sbjct: 277 VLNDCAPDLKFFEERVQKGVIERMEKFINSSFERIDYTEAVEILK---KAKKKFEFEPEWGKDLQTEHERYLTEEHVGRPVVVMNYPEAIKSFYMRLNDDGKTVAAMDVLAPGIGEIIGGSQREERLDVLDQRIQKFGLKPESYQWYRDLRRYGSVPHAGFGLGFERLIVYMCGLQNIRDAIPYPRVPGSA 464
BLAST of FC929270 vs. ExPASy Swiss-Prot
Match: SYN_BUCAP (Asparaginyl-tRNA synthetase OS=Buchnera aphidicola subsp. Schizaphis graminum GN=asnS PE=3 SV=1) HSP 1 Score: 214.157 bits (544), Expect = 7.295e-55 Identity = 106/192 (55.21%), Postives = 133/192 (69.27%), Query Frame = 3 Query: 9 LLDHCFDDMEFMAKNYDKSCINRLRMVASTPFERITYTXXXXXXXXXXKEGKHFENKVEWGIDLASEHERYLTEVKFQKPVIVYNYPKGIKAFYMRLNDDLKTVAAMDVLVPKVGELIGGSQREERYDVIKSRIEDMGLPLEPYEWYLDLRRFGTVKHSGFGLGFERMILFATGIDNIRDVIPFPRYPGRAD 584 LL +C +D++F+ D INRL+ S F RI Y K+ F+N V +G+DL +EHER+L E F+ PV++ NYPK +KAFYMRLNDD KTVAAMD+LVP +GELIGGSQREER V+ R+ ++GL E Y WY DLRR+GTV HSGFG+GFER+I + TGI NIRD+IPFPR AD Sbjct: 277 LLKYCINDIKFLKNYIDNDIINRLKKFLSVNFIRINYKDAIDILLNSKKK---FDNVVSFGVDLNAEHERFLVEKHFKAPVVIINYPKELKAFYMRLNDDKKTVAAMDLLVPGIGELIGGSQREERISVLDLRLSELGLRKEDYWWYRDLRRYGTVHHSGFGMGFERLISYITGISNIRDIIPFPRTVKNAD 465
BLAST of FC929270 vs. ExPASy Swiss-Prot
Match: SYN_PSYIN (Asparaginyl-tRNA synthetase OS=Psychromonas ingrahamii (strain 37) GN=asnS PE=3 SV=1) HSP 1 Score: 213.772 bits (543), Expect = 9.527e-55 Identity = 106/186 (56.99%), Postives = 126/186 (67.74%), Query Frame = 3 Query: 27 DDMEFMAKNYDKSCINRLRMVASTPFERITYTXXXXXXXXXXKEGKHFENKVEWGIDLASEHERYLTEVKFQKPVIVYNYPKGIKAFYMRLNDDLKTVAAMDVLVPKVGELIGGSQREERYDVIKSRIEDMGLPLEPYEWYLDLRRFGTVKHSGFGLGFERMILFATGIDNIRDVIPFPRYPGRAD 584 DDM F A+ DK I RL + S+ F R+ YT GK FE V WG+DL SEHERYL EV PVI+ NYPK IKAFYM+LN D KTVAAMDVL P +GE+IGGSQREE + R ++MG+ E Y WY DLR++GTV H+GFGLGFER++ + TG+ NIRDVI FPR PG AD Sbjct: 283 DDMAFFAQRVDKEAITRLEKIVSSEFVRMDYTDAIEILQNC---GKEFEFPVAWGVDLQSEHERYLAEVHVGAPVILQNYPKDIKAFYMKLNADGKTVAAMDVLAPGIGEIIGGSQREEDLVALDKRFDEMGINKEDYSWYRDLRKYGTVPHAGFGLGFERLVSYVTGVQNIRDVIAFPRAPGSAD 465
BLAST of FC929270 vs. ExPASy Swiss-Prot
Match: SYN_ANASP (Asparaginyl-tRNA synthetase OS=Anabaena sp. (strain PCC 7120) GN=asnS PE=3 SV=1) HSP 1 Score: 213.386 bits (542), Expect = 1.244e-54 Identity = 107/192 (55.73%), Postives = 132/192 (68.75%), Query Frame = 3 Query: 9 LLDHCFDDMEFMAKNYDKSCINRLRMVASTPFERITYTXXXXXXXXXXKEGKHFENKVEWGIDLASEHERYLTEVKFQKPVIVYNYPKGIKAFYMRLNDDLKTVAAMDVLVPKVGELIGGSQREERYDVIKSRIEDMGLPLEPYEWYLDLRRFGTVKHSGFGLGFERMILFATGIDNIRDVIPFPRYPGRAD 584 +L+ C +DMEF + D + + + + FER+TYT K FE V WG+DL SEHERYL E F+KPVIV +YP IKAFYMRL+DD KTV AMDVL PK+GE+IGGSQREER DV++ R+ G+ E WYLDLRR+GTV H+GFGLGFER++ F TG+ NIRDVIPFPR P A+ Sbjct: 274 VLEKCPEDMEFFNQRIDNTVLATAENIINNQFERLTYTDAIKLLE---KADVKFEYPVSWGLDLQSEHERYLAEQLFKKPVIVTDYPAQIKAFYMRLSDDEKTVRAMDVLAPKIGEIIGGSQREERLDVLERRVLAQGMQPEDLWWYLDLRRYGTVPHAGFGLGFERLVQFITGMGNIRDVIPFPRTPQNAE 462
BLAST of FC929270 vs. ExPASy Swiss-Prot
Match: SYN_SYNY3 (Asparaginyl-tRNA synthetase OS=Synechocystis sp. (strain PCC 6803) GN=asnS PE=3 SV=2) HSP 1 Score: 213.001 bits (541), Expect = 1.625e-54 Identity = 103/193 (53.37%), Postives = 135/193 (69.95%), Query Frame = 3 Query: 6 WLLDHCFDDMEFMAKNYDKSCINRLRMVASTPFERITYTXXXXXXXXXXKEGKHFENKVEWGIDLASEHERYLTEVKFQKPVIVYNYPKGIKAFYMRLNDDLKTVAAMDVLVPKVGELIGGSQREERYDVIKSRIEDMGLPLEPYEWYLDLRRFGTVKHSGFGLGFERMILFATGIDNIRDVIPFPRYPGRAD 584 ++L+ C +DMEF + D + + + + F +TY+ K + FE V WG+DL SEHERYL E F++P IV +YPK IKAFYMRLNDD KTVAAMD+L PK+GE+IGGSQREER D++ R+++ G+P E WYLDLRR+G+V H+GFGLGFER++ F TG+ NIRDVIPFPR P A+ Sbjct: 272 FVLEKCPEDMEFFDQRIDNTVLATADNIINNEFAWLTYSEAIKLLE---KADQKFEYPVAWGVDLQSEHERYLAETVFKRPTIVTDYPKDIKAFYMRLNDDGKTVAAMDILAPKIGEIIGGSQREERLDILTQRMQEQGVPEEDLWWYLDLRRYGSVPHAGFGLGFERIVQFMTGMANIRDVIPFPRTPMNAE 461
BLAST of FC929270 vs. ExPASy Swiss-Prot
Match: SYN_XYLFT (Asparaginyl-tRNA synthetase OS=Xylella fastidiosa (strain Temecula1 / ATCC 700964) GN=asnS PE=3 SV=1) HSP 1 Score: 210.305 bits (534), Expect = 1.053e-53 Identity = 100/192 (52.08%), Postives = 136/192 (70.83%), Query Frame = 3 Query: 9 LLDHCFDDMEFMAKNYDKSCINRLRMVASTPFERITYTXXXXXXXXXXKEGKHFENKVEWGIDLASEHERYLTEVKFQKPVIVYNYPKGIKAFYMRLNDDLKTVAAMDVLVPKVGELIGGSQREERYDVIKSRIEDMGLPLEPYEWYLDLRRFGTVKHSGFGLGFERMILFATGIDNIRDVIPFPRYPGRAD 584 +L+ DD+ F+ + +K+ I++L ++PFERI YT + GK F+ VEWG+DL +EHER+LTE +PV+V NYP+ IKAFYMRLNDD KTVAAMDVL P +GE+IGGSQREER +++ R+ GL Y+WY D RR+G+V H+GFGLGFER++++ G+ NIRD IP+PR PG A+ Sbjct: 277 VLEERDDDLAFITERVEKTTISKLEGFINSPFERIEYTDAIKLLE---RSGKKFDFPVEWGLDLQTEHERWLTEKHIGRPVVVTNYPEHIKAFYMRLNDDGKTVAAMDVLAPGIGEIIGGSQREERLEMLDIRMAQFGLDPAHYQWYRDFRRYGSVPHAGFGLGFERLVVYVCGLSNIRDAIPYPRAPGSAE 465
BLAST of FC929270 vs. ExPASy Swiss-Prot
Match: SYN_VIBCH (Asparaginyl-tRNA synthetase OS=Vibrio cholerae GN=asnS PE=3 SV=2) HSP 1 Score: 210.305 bits (534), Expect = 1.053e-53 Identity = 103/185 (55.68%), Postives = 128/185 (69.19%), Query Frame = 3 Query: 27 DDMEFMAKNYDKSCINRLRMVASTPFERITYTXXXXXXXXXXKEGKHFENKVEWGIDLASEHERYLTEVKFQKPVIVYNYPKGIKAFYMRLNDDLKTVAAMDVLVPKVGELIGGSQREERYDVIKSRIEDMGLPLEPYEWYLDLRRFGTVKHSGFGLGFERMILFATGIDNIRDVIPFPRYPGRA 581 DD+EF + I RL + F ++ YT GK FE VEWGIDLASEHER+L E F+ PVIV NYPK IKAFYMR+N+D KTVAAMDVL P +GE+IGGSQREER D++ +R+ + G+ E +WY DLRR+GTV H+GFGLGFER++ + TG+ N+RDVIPFPR P A Sbjct: 283 DDLEFFNDRINNEVIARLEQFVESDFAQVDYTDAIEILKNC---GKTFEFPVEWGIDLASEHERFLAEEHFKAPVIVKNYPKDIKAFYMRMNEDGKTVAAMDVLAPGIGEIIGGSQREERLDILDARMREFGIDPEHMDWYRDLRRYGTVPHAGFGLGFERLVSYVTGMGNVRDVIPFPRTPRSA 464
BLAST of FC929270 vs. ExPASy Swiss-Prot
Match: SYN_GEOSL (Asparaginyl-tRNA synthetase OS=Geobacter sulfurreducens GN=asnS PE=3 SV=1) HSP 1 Score: 209.149 bits (531), Expect = 2.347e-53 Identity = 103/192 (53.65%), Postives = 135/192 (70.31%), Query Frame = 3 Query: 9 LLDHCFDDMEFMAKNYDKSCINRLRMVASTPFERITYTXXXXXXXXXXKEGKHFENKVEWGIDLASEHERYLTEVKFQKPVIVYNYPKGIKAFYMRLNDDLKTVAAMDVLVPKVGELIGGSQREERYDVIKSRIEDMGLPLEPYEWYLDLRRFGTVKHSGFGLGFERMILFATGIDNIRDVIPFPRYPGRAD 584 +LD+C +DM F ++ D+ + R+ VA + F + Y + FE VEWG+DL +EHERYLTE PV V NYP+ IKAFYMR NDD +TVAAMD+LVPKVGE+IGGSQREERYD+++SR+ + G+ E WYLD RR+G+ H+GFGLGFER+I++ TG++NIRDVIPFPR P A+ Sbjct: 272 VLDNCAEDMAFFNEHVDRGLLARVEQVAGSSFAMMEY---GVAIEHLKRAAVPFEYPVEWGLDLQTEHERYLTEQVVGGPVFVVNYPQEIKAFYMRRNDDGRTVAAMDLLVPKVGEIIGGSQREERYDLLESRMREGGIAPESLWWYLDSRRWGSTPHAGFGLGFERLIMYLTGMENIRDVIPFPRTPRHAE 460
BLAST of FC929270 vs. ExPASy Swiss-Prot
Match: SYN_ALKOO (Asparaginyl-tRNA synthetase OS=Alkaliphilus oremlandii (strain OhILAs) GN=asnS PE=3 SV=1) HSP 1 Score: 209.149 bits (531), Expect = 2.347e-53 Identity = 101/194 (52.06%), Postives = 140/194 (72.16%), Query Frame = 3 Query: 3 DWLLDHCFDDMEFMAKNYDKSCINRLRMVASTPFERITYTXXXXXXXXXXKEGKHFENKVEWGIDLASEHERYLTEVKFQKPVIVYNYPKGIKAFYMRLNDDLKTVAAMDVLVPKVGELIGGSQREERYDVIKSRIEDMGLPLEPYEWYLDLRRFGTVKHSGFGLGFERMILFATGIDNIRDVIPFPRYPGRAD 584 ++++++ ++MEF DK ++RL VA++ F R+TYT K G+ FE V WG DL +EHERYLTE F+KPV V +YPK IKAFYM+LN+D KTVAAMD+LVP +GE+IGGSQRE+ +++ R++ MGL E Y WYL+LR++G+ +H+G+GLGFER I++ TG+ NIRDVI FPR P A+ Sbjct: 272 NYVMENAPEEMEFFNSFVDKGLLDRLNNVATSDFGRVTYTEAIEILQ---KSGETFEYPVAWGTDLQTEHERYLTEKVFKKPVFVTDYPKDIKAFYMKLNEDGKTVAAMDLLVPGIGEIIGGSQREDNLALLEERMDAMGLDKEEYWWYLELRKYGSARHAGYGLGFERAIMYLTGMSNIRDVISFPRTPKSAE 462 The following BLAST results are available for this feature:
BLAST of FC929270 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 320
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Sequences
The
following sequences are available for this feature:
EST sequence >FC929270 ID=FC929270; Name=FC929270; organism=Citrus clementina; type=EST; length=822bpback to top |