FC929270
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC929270 vs. ExPASy Swiss-Prot
Match: SYN_XYLFA (Asparaginyl-tRNA synthetase OS=Xylella fastidiosa GN=asnS PE=3 SV=1) HSP 1 Score: 207.223 bits (526), Expect = 8.917e-53 Identity = 99/192 (51.56%), Postives = 134/192 (69.79%), Query Frame = 3 Query: 9 LLDHCFDDMEFMAKNYDKSCINRLRMVASTPFERITYTXXXXXXXXXXKEGKHFENKVEWGIDLASEHERYLTEVKFQKPVIVYNYPKGIKAFYMRLNDDLKTVAAMDVLVPKVGELIGGSQREERYDVIKSRIEDMGLPLEPYEWYLDLRRFGTVKHSGFGLGFERMILFATGIDNIRDVIPFPRYPGRAD 584 +L+ DD+ F+ + +K+ I++L +PFERI YT + GK F+ VEWG+DL +EHER+LTE +PV+V NYP+ IKAFYMRLNDD KTVAAMDVL P +GE+IGGSQREER +++ R+ GL Y+WY D RR+G+V H+GFGLGFER++++ G+ NIRD IP+PR P A+ Sbjct: 277 VLEERTDDLAFITERVEKTTISKLEGFIKSPFERIEYTDAIKLLE---RSGKKFDFPVEWGLDLQTEHERWLTEKHIGRPVVVTNYPEHIKAFYMRLNDDGKTVAAMDVLAPGIGEIIGGSQREERLEMLDIRMAQFGLDPTHYQWYRDFRRYGSVPHAGFGLGFERLMVYVCGLSNIRDAIPYPRAPSSAE 465
BLAST of FC929270 vs. ExPASy Swiss-Prot
Match: SYN_RHOBA (Asparaginyl-tRNA synthetase OS=Rhodopirellula baltica GN=asnS PE=3 SV=1) HSP 1 Score: 206.838 bits (525), Expect = 1.165e-52 Identity = 105/191 (54.97%), Postives = 132/191 (69.11%), Query Frame = 3 Query: 12 LDHCFDDMEFMAKNYDKSCINRLRMVASTPFERITYTXXXXXXXXXXKEGKHFENKVEWGIDLASEHERYLTEVKFQKPVIVYNYPKGIKAFYMRLNDDLKTVAAMDVLVPKVGELIGGSQREERYDVIKSRIEDMGLPLEPYEWYLDLRRFGTVKHSGFGLGFERMILFATGIDNIRDVIPFPRYPGRAD 584 L HC +DM+F + +K I++L+ V PFE +TYT ++ FE V WG DL +EHERYLT V PVI+ +YP IK FYMR++DD KTVAAMDVLVP VGE+IGGSQREER DV++ R+ + GL Y WY+DLRR+GTV H+GFGLG ER + + TG+ NIRDVIPFPR PG A+ Sbjct: 303 LSHCGEDMDFFNERIEKGKIDQLKSVIEKPFEHMTYTDAVERLLACDEK---FEYPVNWGTDLQAEHERYLTSV-VGGPVILTDYPSSIKPFYMRVSDDGKTVAAMDVLVPGVGEIIGGSQREERLDVLQRRMAEGGLDESEYWWYVDLRRYGTVPHAGFGLGLERAVQYVTGMANIRDVIPFPRTPGNAE 489
BLAST of FC929270 vs. ExPASy Swiss-Prot
Match: SYN_GEOMG (Asparaginyl-tRNA synthetase OS=Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210) GN=asnS PE=3 SV=1) HSP 1 Score: 206.838 bits (525), Expect = 1.165e-52 Identity = 106/192 (55.21%), Postives = 133/192 (69.27%), Query Frame = 3 Query: 9 LLDHCFDDMEFMAKNYDKSCINRLRMVASTPFERITYTXXXXXXXXXXKEGKHFENKVEWGIDLASEHERYLTEVKFQKPVIVYNYPKGIKAFYMRLNDDLKTVAAMDVLVPKVGELIGGSQREERYDVIKSRIEDMGLPLEPYEWYLDLRRFGTVKHSGFGLGFERMILFATGIDNIRDVIPFPRYPGRAD 584 +LD C +DM F + DK I R+ VA++ F + Y K FE VEWG+DL +EHERYLTE PV V NYPK IKAFYMR+NDD KTVAAMD+LVPKVGE+IGGSQREER V++ R+ ++G+ E WYLD RR+G+ H+GFGLGFER+I++ TG++NIRDVIPFPR P A+ Sbjct: 272 VLDACGEDMAFFNDHIDKGLIARVEQVANSSFAIMEY---GEAIERLKKATVTFEYPVEWGLDLQTEHERYLTEQVVGGPVFVINYPKHIKAFYMRVNDDNKTVAAMDLLVPKVGEIIGGSQREERLPVLEGRMAEVGVNPEGLWWYLDSRRWGSTPHAGFGLGFERLIMYLTGMENIRDVIPFPRTPRHAE 460
BLAST of FC929270 vs. ExPASy Swiss-Prot
Match: SYN_LAWIP (Asparaginyl-tRNA synthetase OS=Lawsonia intracellularis (strain PHE/MN1-00) GN=asnS PE=3 SV=1) HSP 1 Score: 206.453 bits (524), Expect = 1.521e-52 Identity = 102/183 (55.74%), Postives = 129/183 (70.49%), Query Frame = 3 Query: 27 DDMEFMAKNYDKSCINRLRMVASTPFERITYTXXXXXXXXXXKEGKHFENKVEWGIDLASEHERYLTEVKFQKPVIVYNYPKGIKAFYMRLNDDLKTVAAMDVLVPKVGELIGGSQREERYDVIKSRIEDMGLPLEPYEWYLDLRRFGTVKHSGFGLGFERMILFATGIDNIRDVIPFPRYPG 575 DD+ + K I L + + PF R +Y K+ FE V +G+DL SEHE+YLTE F+ PVI+++YPK IKAFYMR NDD +TVAAMD+LVP++GELIGGSQREER D + SRI ++G +E Y WYLDLRRFGTV H+GFGLGFER+++ TG+ NIRDV+PFPR PG Sbjct: 272 DDIMLLDKYVQPGLIKALENIIAKPFIRCSYHDAITILLSSHKD---FEFPVTFGLDLQSEHEKYLTEEYFKHPVIIFDYPKEIKAFYMRQNDDEETVAAMDLLVPRIGELIGGSQREERLDNLLSRIRELGQSIEEYWWYLDLRRFGTVPHAGFGLGFERLVMLLTGVSNIRDVLPFPRTPG 451
BLAST of FC929270 vs. ExPASy Swiss-Prot
Match: SYN_HAHCH (Asparaginyl-tRNA synthetase OS=Hahella chejuensis (strain KCTC 2396) GN=asnS PE=3 SV=1) HSP 1 Score: 206.453 bits (524), Expect = 1.521e-52 Identity = 107/191 (56.02%), Postives = 130/191 (68.06%), Query Frame = 3 Query: 9 LLDHCFDDMEFMAKNYDKSCINRLRMVASTPFERITYTXXXXXXXXXXKEGKHFENKVEWGIDLASEHERYLTEVKFQKPVIVYNYPKGIKAFYMRLNDDLKTVAAMDVLVPKVGELIGGSQREERYDVIKSRIEDMGLPLEPYEWYLDLRRFGTVKHSGFGLGFERMILFATGIDNIRDVIPFPRYPGRA 581 +LD DDM F A+ + ++RL + F RI Y+ GK FE V+WG+DL SEHERYL E PVIV NYPK IKAFYMRLNDD KTVAAMDVL P +GE+IGGSQRE+R DV+ +RI DM E + WY DLRR+G+V H+GFGLGFER+I + TG++N+RDVIPFPR P A Sbjct: 277 VLDERSDDMAFFAERINPDVVSRLENMVDKEFVRIDYSEAIKILQNC---GKKFEYPVQWGLDLQSEHERYLAETHVGAPVIVMNYPKEIKAFYMRLNDDDKTVAAMDVLAPGIGEIIGGSQREDRLDVLDARIGDMHHKEELW-WYRDLRRYGSVPHAGFGLGFERLIAYVTGMENVRDVIPFPRTPDNA 463
BLAST of FC929270 vs. ExPASy Swiss-Prot
Match: SYN_GEOUR (Asparaginyl-tRNA synthetase OS=Geobacter uraniireducens (strain Rf4) GN=asnS PE=3 SV=1) HSP 1 Score: 206.453 bits (524), Expect = 1.521e-52 Identity = 104/192 (54.17%), Postives = 132/192 (68.75%), Query Frame = 3 Query: 9 LLDHCFDDMEFMAKNYDKSCINRLRMVASTPFERITYTXXXXXXXXXXKEGKHFENKVEWGIDLASEHERYLTEVKFQKPVIVYNYPKGIKAFYMRLNDDLKTVAAMDVLVPKVGELIGGSQREERYDVIKSRIEDMGLPLEPYEWYLDLRRFGTVKHSGFGLGFERMILFATGIDNIRDVIPFPRYPGRAD 584 +LD+C +DM F + DK + R+R VA + F + YT K F VEWG+DL SEHERY+TE PV + NYPK IKAFYMR NDD KTVAAMD+LVPKVGE+IGGSQREER D++ R+ MG+ + WYLD RR+G+ H+GFGLGFER++++ TG++NIRDVIPFPR P A+ Sbjct: 272 VLDNCGEDMAFFNEQIDKGLLERVRAVADSSFAVMEYTEAITHLK---KAKVPFAFPVEWGLDLQSEHERYITEKVVGGPVFLVNYPKDIKAFYMRQNDDGKTVAAMDLLVPKVGEIIGGSQREERLDLLLERMAQMGINEDGLWWYLDSRRWGSCPHAGFGLGFERLLMYLTGMENIRDVIPFPRTPRHAE 460
BLAST of FC929270 vs. ExPASy Swiss-Prot
Match: SYN_IDILO (Asparaginyl-tRNA synthetase OS=Idiomarina loihiensis GN=asnS PE=3 SV=1) HSP 1 Score: 206.068 bits (523), Expect = 1.987e-52 Identity = 100/186 (53.76%), Postives = 127/186 (68.28%), Query Frame = 3 Query: 27 DDMEFMAKNYDKSCINRLRMVASTPFERITYTXXXXXXXXXXKEGKHFENKVEWGIDLASEHERYLTEVKFQKPVIVYNYPKGIKAFYMRLNDDLKTVAAMDVLVPKVGELIGGSQREERYDVIKSRIEDMGLPLEPYEWYLDLRRFGTVKHSGFGLGFERMILFATGIDNIRDVIPFPRYPGRAD 584 DDM F A+ + I+RL + + F + YT ++ FE VEWG+DL SEHERYL E P+I+ NYP+ IKAFYMR N+D KTVAAMDVL P +GE+IGGS REER D++ RI++M LP E Y +Y DLRR+GTV H+GFGLGFER++ + TG+ NIRDVIPFPR P A+ Sbjct: 283 DDMAFFAERINSDAISRLEAIVNNDFVHMDYTDAIEILKNCDRK---FEYAVEWGVDLQSEHERYLAEEHVGAPIILKNYPRDIKAFYMRQNEDGKTVAAMDVLAPGIGEIIGGSAREERLDILDQRIDEMNLPKEEYGFYRDLRRYGTVPHAGFGLGFERLVAYVTGVQNIRDVIPFPRAPKSAE 465
BLAST of FC929270 vs. ExPASy Swiss-Prot
Match: SYN_BORAP (Asparaginyl-tRNA synthetase OS=Borrelia afzelii (strain PKo) GN=asnS PE=3 SV=1) HSP 1 Score: 205.682 bits (522), Expect = 2.595e-52 Identity = 99/188 (52.66%), Postives = 130/188 (69.15%), Query Frame = 3 Query: 9 LLDHCFDDMEFMAKNYDKSCINRLRMVASTPFERITYTXXXXXXXXXXKEGKHFENKVEWGIDLASEHERYLTEVKFQKPVIVYNYPKGIKAFYMRLNDDLKTVAAMDVLVPKVGELIGGSQREERYDVIKSRIEDMGLPLEPYEWYLDLRRFGTVKHSGFGLGFERMILFATGIDNIRDVIPFPRYP 572 +L+ C DM+F+ +K I +L V ++ FE ITYT K+FE K WGIDL +EHER+LTE F+KPV+V +YPK KAFYM++N D KTV MDVLVPK+GE+IGGS+RE+ +++RI+++ L +E WYLDLRRFG+ HSGFGLG ER + ++TGI NIRD IPFPR P Sbjct: 273 ILNECSQDMDFLENYIEKGLIKKLENVINSNFEVITYTKAIEILE---SSKKNFEIKPYWGIDLQTEHERFLTEETFKKPVVVIDYPKNFKAFYMKINKDNKTVKGMDVLVPKIGEIIGGSEREDNLQKLENRIKELNLSIEHLNWYLDLRRFGSTPHSGFGLGLERFVQYSTGISNIRDSIPFPRTP 457
BLAST of FC929270 vs. ExPASy Swiss-Prot
Match: SYN_BAUCH (Asparaginyl-tRNA synthetase OS=Baumannia cicadellinicola subsp. Homalodisca coagulata GN=asnS PE=3 SV=1) HSP 1 Score: 205.682 bits (522), Expect = 2.595e-52 Identity = 102/185 (55.14%), Postives = 129/185 (69.73%), Query Frame = 3 Query: 27 DDMEFMAKNYDKSCINRLRMVASTPFERITYTXXXXXXXXXXKEGKHFENKVEWGIDLASEHERYLTEVKFQKPVIVYNYPKGIKAFYMRLNDDLKTVAAMDVLVPKVGELIGGSQREERYDVIKSRIEDMGLPLEPYEWYLDLRRFGTVKHSGFGLGFERMILFATGIDNIRDVIPFPRYPGRA 581 DD+ F A+ +K+ I RL S+ F +I YT ++ F++ V WG+DL +EHERYL + FQ PV+V NYPK IKAFYMR+NDD KTVAAMDVL P +GE+IGGSQREER + R+ D GL +E Y WY DLR +GTV HSGFGLG ER++++ TG+ NIRDVIPFPR P +A Sbjct: 284 DDINFFAEQINKNIIKRLEQFISSNFAQIDYTEAIDILQNCKQK---FDHTVFWGMDLFAEHERYLADKHFQAPVVVTNYPKDIKAFYMRINDDGKTVAAMDVLAPGIGEIIGGSQREERLAKLDQRLADRGLNIEDYWWYRDLRSYGTVPHSGFGLGLERLMIYITGMHNIRDVIPFPRNPRQA 465
BLAST of FC929270 vs. ExPASy Swiss-Prot
Match: SYN_ACHLI (Asparaginyl-tRNA synthetase OS=Acholeplasma laidlawii (strain PG-8A) GN=asnS PE=3 SV=1) HSP 1 Score: 205.297 bits (521), Expect = 3.389e-52 Identity = 102/189 (53.97%), Postives = 134/189 (70.90%), Query Frame = 3 Query: 6 WLLDHCFDDMEFMAKNYDKSCINRLRMVASTPFERITYTXXXXXXXXXXKEGKHFENKVEWGIDLASEHERYLTEVKFQKPVIVYNYPKGIKAFYMRLNDDLKTVAAMDVLVPKVGELIGGSQREERYDVIKSRIEDMGLPLEPYEWYLDLRRFGTVKHSGFGLGFERMILFATGIDNIRDVIPFPRYP 572 ++L+H ++M F K +K + +L + + F+RIT+ K FEN+ + G DLA EHERYLTE F PV V ++PK IKAFYMRLNDD KTVAA+D+LVP GEL+GGSQREER DV+ R+EDM +P++ +WYLDLRR+G V+ SGFGLGFER +++ TG++NIRDVIPFPR P Sbjct: 273 YVLEHAKEEMAFFDKFVEKGLLTKLDNLLKSSFKRITHEEAINILL---KSNHKFENQPKHGEDLAKEHERYLTEKAFHGPVFVKDWPKDIKAFYMRLNDDQKTVAAVDLLVPGSGELVGGSQREERLDVLLKRMEDMHVPVKDLDWYLDLRRYGGVQTSGFGLGFERYLIYVTGVENIRDVIPFPRTP 458 The following BLAST results are available for this feature:
BLAST of FC929270 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 320
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Sequences
The
following sequences are available for this feature:
EST sequence >FC929270 ID=FC929270; Name=FC929270; organism=Citrus clementina; type=EST; length=822bpback to top |