FC929270

Overview
NameFC929270
Unique NameFC929270
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length822
Libraries
Library NameType
PhII-IIIV1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC929270 vs. ExPASy Swiss-Prot
Match: SYN_BORBU (Asparaginyl-tRNA synthetase OS=Borrelia burgdorferi GN=asnS PE=3 SV=1)

HSP 1 Score: 204.142 bits (518), Expect = 7.549e-52
Identity = 98/188 (52.13%), Postives = 130/188 (69.15%), Query Frame = 3
Query:    9 LLDHCFDDMEFMAKNYDKSCINRLRMVASTPFERITYTXXXXXXXXXXKEGKHFENKVEWGIDLASEHERYLTEVKFQKPVIVYNYPKGIKAFYMRLNDDLKTVAAMDVLVPKVGELIGGSQREERYDVIKSRIEDMGLPLEPYEWYLDLRRFGTVKHSGFGLGFERMILFATGIDNIRDVIPFPRYP 572
            +L+ C  DM+F+    +K  I +L  V ++ FE ITYT             K+FE K  WGIDL ++HERYLTE  F+KPV+V +YPK  KAFYM+ N D KTV  MD+LVPK+GE+IGGS+RE+    +++RI+++ L +E   WYLDLRRFG+  HSGFGLG ER++ ++TGI NIRD IPFPR P
Sbjct:  277 ILNECSQDMDFLENYIEKGLIKKLENVINSNFEVITYTKAIEILE---NSKKNFEIKPYWGIDLQTDHERYLTEETFKKPVVVIDYPKNFKAFYMKANKDNKTVKGMDILVPKIGEIIGGSEREDDLQKLENRIKELNLNIEHLNWYLDLRRFGSAPHSGFGLGLERLVQYSTGISNIRDSIPFPRTP 461          
BLAST of FC929270 vs. ExPASy Swiss-Prot
Match: SYN_SYNFM (Asparaginyl-tRNA synthetase OS=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) GN=asnS PE=3 SV=1)

HSP 1 Score: 203.371 bits (516), Expect = 1.288e-51
Identity = 97/191 (50.79%), Postives = 131/191 (68.59%), Query Frame = 3
Query:   12 LDHCFDDMEFMAKNYDKSCINRLRMVASTPFERITYTXXXXXXXXXXKEGKHFENKVEWGIDLASEHERYLTEVKFQKPVIVYNYPKGIKAFYMRLNDDLKTVAAMDVLVPKVGELIGGSQREERYDVIKSRIEDMGLPLEPYEWYLDLRRFGTVKHSGFGLGFERMILFATGIDNIRDVIPFPRYPGRAD 584
            L  C +D++F  +  + +    L  VA +PFE +TYT          + G++FE  VEWG DL +EHERYLTE  F+KP  V ++P+ +K FYMR+NDD  TVAAMD+LVP  GE+IGGSQREER D++  ++    +  E Y+WYLDLR FG+V H+GFG+G ER++ F TG+ NIR+VIPFPR PG A+
Sbjct:  278 LQDCAEDLDFFTRFIEPTLRGTLETVAFSPFETVTYTEAVRILK---ESGENFEFPVEWGNDLQAEHERYLTEKVFRKPAAVIHFPRALKPFYMRVNDDGNTVAAMDILVPGTGEIIGGSQREERPDILVEQMRLKSVAPEDYKWYLDLREFGSVPHAGFGMGLERLVQFVTGLPNIREVIPFPRTPGHAE 465          
BLAST of FC929270 vs. ExPASy Swiss-Prot
Match: SYN_PELPD (Asparaginyl-tRNA synthetase OS=Pelobacter propionicus (strain DSM 2379) GN=asnS PE=3 SV=1)

HSP 1 Score: 202.986 bits (515), Expect = 1.682e-51
Identity = 96/191 (50.26%), Postives = 132/191 (69.11%), Query Frame = 3
Query:   12 LDHCFDDMEFMAKNYDKSCINRLRMVASTPFERITYTXXXXXXXXXXKEGKHFENKVEWGIDLASEHERYLTEVKFQKPVIVYNYPKGIKAFYMRLNDDLKTVAAMDVLVPKVGELIGGSQREERYDVIKSRIEDMGLPLEPYEWYLDLRRFGTVKHSGFGLGFERMILFATGIDNIRDVIPFPRYPGRAD 584
            L+ C ++M F  +  +K  + R+R VA   F R+ Y           + G  F   VEWG+DL +EHERY+TE     P  + NYP+ IKAFYMR N D +TVAAMD+LVPKVGE+IGGSQREER DV+++R+ ++G+  EP  WYL+ RR+G+  H+GFGLGFER++++ +G++NIRDVIPFPR P  A+
Sbjct:  271 LEECAEEMAFFDRQIEKGLLERVRRVAEADFVRMEYDEAIQRLQ---RSGVTFSYPVEWGLDLQTEHERYITEKIVGGPAFILNYPRDIKAFYMRSNPDNRTVAAMDLLVPKVGEIIGGSQREERLDVLEARMAELGIAREPLWWYLESRRWGSCPHAGFGLGFERLVMYLSGMENIRDVIPFPRTPRHAE 458          
BLAST of FC929270 vs. ExPASy Swiss-Prot
Match: SYN_AZOPC (Asparaginyl-tRNA synthetase OS=Azobacteroides pseudotrichonymphae genomovar. CFP2 GN=asnS PE=3 SV=1)

HSP 1 Score: 201.445 bits (511), Expect = 4.893e-51
Identity = 97/193 (50.26%), Postives = 128/193 (66.32%), Query Frame = 3
Query:    6 WLLDHCFDDMEFMAKNYDKSCINRLRMVASTPFERITYTXXXXXXXXXXKEGKHFENKVEWGIDLASEHERYLTEVKFQKPVIVYNYPKGIKAFYMRLNDDLKTVAAMDVLVPKVGELIGGSQREERYDVIKSRIEDMGLPLEPYEWYLDLRRFGTVKHSGFGLGFERMILFATGIDNIRDVIPFPRYPGRAD 584
            + + +C DD+EF+   Y+   I  L  V S  F R+ Y+          +E   FE  + WGIDL SEHERYL E  F+ PVI+ NYPK IK+FYM+ NDD +TV  MDVL P++GE+IGGS+RE  +  +  RI+++ + ++   WYLD RRFGT  HSGFGLGFER++LF TG+ NIRDVIPFPR P  A+
Sbjct:  274 YAMKYCKDDIEFLNNTYNNELIEHLNFVLSNRFVRLAYSEGIRILEQSNEE---FEFPIYWGIDLQSEHERYLVEKYFKCPVIMTNYPKDIKSFYMKQNDDGRTVRGMDVLFPRIGEIIGGSERESDHQKLLKRIKELNMSMDNLWWYLDTRRFGTAPHSGFGLGFERLVLFVTGMQNIRDVIPFPRTPKNAE 463          
BLAST of FC929270 vs. ExPASy Swiss-Prot
Match: SYN_UREU1 (Asparaginyl-tRNA synthetase OS=Ureaplasma urealyticum serovar 10 (strain ATCC 33699 / Western) GN=asnS PE=3 SV=1)

HSP 1 Score: 200.29 bits (508), Expect = 1.090e-50
Identity = 92/186 (49.46%), Postives = 132/186 (70.97%), Query Frame = 3
Query:   30 DMEFMAKNYDKSCINRLRMVASTPFERITYTXXXXXXXXXXKEGKHFE-NKVEWGIDLASEHERYLTEVKFQKPVIVYNYPKGIKAFYMRLNDDLKTVAAMDVLVPKVGELIGGSQREERYDVIKSRIEDMGLPLEPYEWYLDLRRFGTVKHSGFGLGFERMILFATGIDNIRDVIPFPRYPGRAD 584
            ++EF+A+  D++ I +L+ V  + FERI Y           K G  FE N++ +G+DL SEHERY+ E   Q PV + NYPK IKAFYM+LNDD +TVA+ D+L+P VGEL+GGSQRE+ Y+ +  R +++ +P+E  +WYLDLRRFG    SGFG+GFER++++ TG++NI+D IPFPR  G+ +
Sbjct:  268 ELEFLAQRNDENLIKKLQKVVDSKFERIEYKDAVKILANAVKSGHQFEDNEIFFGMDLGSEHERYMCETYHQGPVFLQNYPKDIKAFYMKLNDDQQTVASTDLLIPGVGELVGGSQREDNYEKLLKRCQELKMPIESLQWYLDLRRFGYYMSSGFGIGFERLVMYVTGVNNIKDTIPFPRSHGQIE 453          
BLAST of FC929270 vs. ExPASy Swiss-Prot
Match: SYN_BORGA (Asparaginyl-tRNA synthetase OS=Borrelia garinii GN=asnS PE=3 SV=1)

HSP 1 Score: 200.29 bits (508), Expect = 1.090e-50
Identity = 96/188 (51.06%), Postives = 129/188 (68.62%), Query Frame = 3
Query:    9 LLDHCFDDMEFMAKNYDKSCINRLRMVASTPFERITYTXXXXXXXXXXKEGKHFENKVEWGIDLASEHERYLTEVKFQKPVIVYNYPKGIKAFYMRLNDDLKTVAAMDVLVPKVGELIGGSQREERYDVIKSRIEDMGLPLEPYEWYLDLRRFGTVKHSGFGLGFERMILFATGIDNIRDVIPFPRYP 572
            +L+ C  DM+F+    +K  I +L  V ++ FE ITYT             K+FE K  WGIDL ++HERYLTE  F+KP+ V +YPK  KAFYM++N D KTV  MD+LVP++GE+IGGS+RE+    +++RI+++ L +E   WYLDLRRFG+  HSGFGLG ER++ + TGI NIRD IPFPR P
Sbjct:  273 ILNECSQDMDFLENYIEKGLIKKLENVINSNFEVITYTKAIEILE---SSKKNFEIKPCWGIDLQTDHERYLTEEIFKKPIAVIDYPKNFKAFYMKINKDNKTVKGMDILVPRIGEIIGGSEREDDLQKLENRIKELNLNIEHLNWYLDLRRFGSTPHSGFGLGLERLVQYTTGISNIRDSIPFPRTP 457          
BLAST of FC929270 vs. ExPASy Swiss-Prot
Match: SYN_UREPA (Asparaginyl-tRNA synthetase OS=Ureaplasma parvum GN=asnS PE=3 SV=1)

HSP 1 Score: 199.904 bits (507), Expect = 1.424e-50
Identity = 92/186 (49.46%), Postives = 132/186 (70.97%), Query Frame = 3
Query:   30 DMEFMAKNYDKSCINRLRMVASTPFERITYTXXXXXXXXXXKEGKHFEN-KVEWGIDLASEHERYLTEVKFQKPVIVYNYPKGIKAFYMRLNDDLKTVAAMDVLVPKVGELIGGSQREERYDVIKSRIEDMGLPLEPYEWYLDLRRFGTVKHSGFGLGFERMILFATGIDNIRDVIPFPRYPGRAD 584
            ++EF+A+  D++ I +L+ V  + FERI Y           K G  FEN ++ +G+DL SEHERY+ E   Q PV + NYPK IKAFYM+LNDD +TVA+ D+L+P VGEL+GGSQRE+ Y+ +  R +++ +P+E  +WYLDLRRFG    SGFG+GFER++++ TG++NI+D IPFPR  G+ +
Sbjct:  268 ELEFLAQRNDENLIKKLQKVVESKFERIEYKDAVKILADAVKNGHQFENNEIFFGMDLGSEHERYMCETYHQGPVFLQNYPKDIKAFYMKLNDDQQTVASTDLLIPGVGELVGGSQREDSYEKLLKRCQELKMPIESLQWYLDLRRFGYYMSSGFGIGFERLVMYVTGVNNIKDTIPFPRSHGQIE 453          
BLAST of FC929270 vs. ExPASy Swiss-Prot
Match: SYN_UREP2 (Asparaginyl-tRNA synthetase OS=Ureaplasma parvum serovar 3 (strain ATCC 27815 / 27 / NCTC 11736) GN=asnS PE=3 SV=1)

HSP 1 Score: 199.904 bits (507), Expect = 1.424e-50
Identity = 92/186 (49.46%), Postives = 132/186 (70.97%), Query Frame = 3
Query:   30 DMEFMAKNYDKSCINRLRMVASTPFERITYTXXXXXXXXXXKEGKHFEN-KVEWGIDLASEHERYLTEVKFQKPVIVYNYPKGIKAFYMRLNDDLKTVAAMDVLVPKVGELIGGSQREERYDVIKSRIEDMGLPLEPYEWYLDLRRFGTVKHSGFGLGFERMILFATGIDNIRDVIPFPRYPGRAD 584
            ++EF+A+  D++ I +L+ V  + FERI Y           K G  FEN ++ +G+DL SEHERY+ E   Q PV + NYPK IKAFYM+LNDD +TVA+ D+L+P VGEL+GGSQRE+ Y+ +  R +++ +P+E  +WYLDLRRFG    SGFG+GFER++++ TG++NI+D IPFPR  G+ +
Sbjct:  268 ELEFLAQRNDENLIKKLQKVVESKFERIEYKDAVKILADAVKNGHQFENNEIFFGMDLGSEHERYMCETYHQGPVFLQNYPKDIKAFYMKLNDDQQTVASTDLLIPGVGELVGGSQREDSYEKLLKRCQELKMPIESLQWYLDLRRFGYYMSSGFGIGFERLVMYVTGVNNIKDTIPFPRSHGQIE 453          
BLAST of FC929270 vs. ExPASy Swiss-Prot
Match: SYN_BLOPB (Asparaginyl-tRNA synthetase OS=Blochmannia pennsylvanicus (strain BPEN) GN=asnS PE=3 SV=1)

HSP 1 Score: 199.519 bits (506), Expect = 1.859e-50
Identity = 98/186 (52.69%), Postives = 127/186 (68.28%), Query Frame = 3
Query:    9 LLDHCFDDMEFMAKNYDKSCINRLRMVASTPFERITYTXXXXXXXXXXKEGKHFENKVEWGIDLASEHERYLTEVKFQKPVIVYNYPKGIKAFYMRLNDDLKTVAAMDVLVPKVGELIGGSQREERYDVIKSRIEDMGLPLEPYEWYLDLRRFGTVKHSGFGLGFERMILFATGIDNIRDVIPFPR 566
            LL+   DD++++    +K+ I  L   +   F  I YT          ++   F N + WG DL SEHE+YL+E  F+ PVI+ N+PK IKAFYMRLNDD KTVA+MD+LVP +GE+IGGSQREER   +  R+++  L  E Y WY DLRR+GTV HSGFGLGFER++++ TGI NIRDVIPFPR
Sbjct:  281 LLEKRSDDIKYLVDKINKNIITILENFSEIKFNHIEYTEAIKLLEICNRK---FNNPIHWGTDLFSEHEKYLSEEYFKSPVIIKNFPKNIKAFYMRLNDDNKTVASMDILVPGIGEIIGGSQREERLSKLDQRLQENCLTQENYWWYRDLRRYGTVPHSGFGLGFERLMIYVTGIKNIRDVIPFPR 463          
BLAST of FC929270 vs. ExPASy Swiss-Prot
Match: SYN_BLOFL (Asparaginyl-tRNA synthetase OS=Blochmannia floridanus GN=asnS PE=3 SV=1)

HSP 1 Score: 196.438 bits (498), Expect = 1.574e-49
Identity = 95/187 (50.80%), Postives = 127/187 (67.91%), Query Frame = 3
Query:    9 LLDHCFDDMEFMAKNYDK-SCINRLRMVASTPFERITYTXXXXXXXXXXKEGKHFENKVEWGIDLASEHERYLTEVKFQKPVIVYNYPKGIKAFYMRLNDDLKTVAAMDVLVPKVGELIGGSQREERYDVIKSRIEDMGLPLEPYEWYLDLRRFGTVKHSGFGLGFERMILFATGIDNIRDVIPFPR 566
            +L+ C +D+E+ A +  + + I RL     +    I YT          K    F N + WG+DL SEHE+YL+E  FQ P+++ N+PK IKAFYMRLNDD KTV++MD+LVP +GE+IGGSQREER  ++  R+ +  L  E Y WY DLRR+GTV HSGFGLGFER+I++ TG+ NIRD +PFPR
Sbjct:  280 ILEQCINDIEYCASHIKEYNLIKRLENFLHSKIIHIEYTDAIKLLSSCDKT---FNNTIYWGMDLFSEHEKYLSEEYFQSPIVIKNHPKNIKAFYMRLNDDNKTVSSMDILVPGIGEIIGGSQREERLSILDKRLLENNLKTECYWWYRDLRRYGTVPHSGFGLGFERLIIYITGLTNIRDAVPFPR 463          
The following BLAST results are available for this feature:
BLAST of FC929270 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 320
Match NameE-valueIdentityDescription
SYN_BORBU7.549e-5252.13Asparaginyl-tRNA synthetase OS=Borrelia burgdorfer... [more]
SYN_SYNFM1.288e-5150.79Asparaginyl-tRNA synthetase OS=Syntrophobacter fum... [more]
SYN_PELPD1.682e-5150.26Asparaginyl-tRNA synthetase OS=Pelobacter propioni... [more]
SYN_AZOPC4.893e-5150.26Asparaginyl-tRNA synthetase OS=Azobacteroides pseu... [more]
SYN_UREU11.090e-5049.46Asparaginyl-tRNA synthetase OS=Ureaplasma urealyti... [more]
SYN_BORGA1.090e-5051.06Asparaginyl-tRNA synthetase OS=Borrelia garinii GN... [more]
SYN_UREPA1.424e-5049.46Asparaginyl-tRNA synthetase OS=Ureaplasma parvum G... [more]
SYN_UREP21.424e-5049.46Asparaginyl-tRNA synthetase OS=Ureaplasma parvum s... [more]
SYN_BLOPB1.859e-5052.69Asparaginyl-tRNA synthetase OS=Blochmannia pennsyl... [more]
SYN_BLOFL1.574e-4950.80Asparaginyl-tRNA synthetase OS=Blochmannia florida... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAH2AF09RM1 PhII-IIIV1 Citrus clementina cDNA clone KN0AAH2AF09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929270 ID=FC929270; Name=FC929270; organism=Citrus clementina; type=EST; length=822bp
GTGACTGGTTACTTGACCATTGCTTTGACGACATGGAGTTTATGGCTAAA
AATTATGATAAAAGTTGCATTAACCGTCTAAGAATGGTTGCTTCAACTCC
CTTTGAACGCATAACATACACTGAAGCAGTAGAGCTACTAGAGGTTGCTG
TGAAGGAGGGGAAACATTTTGAGAATAAAGTGGAGTGGGGGATTGATTTG
GCATCTGAGCATGAAAGATACTTAACTGAGGTCAAATTTCAGAAGCCTGT
CATTGTGTACAACTATCCAAAAGGAATCAAAGCATTTTACATGAGGCTCA
ATGATGACTTGAAGACTGTGGCAGCTATGGATGTCCTTGTACCTAAGGTA
GGAGAGTTAATTGGTGGGAGCCAAAGGGAAGAGCGTTATGATGTAATCAA
GAGCAGAATAGAGGACATGGGACTCCCTCTTGAACCATACGAGTGGTACC
TTGACCTGCGGCGCTTTGGGACAGTGAAACATAGTGGGTTTGGCTTAGGC
TTTGAACGGATGATTCTTTTTGCCACAGGCATCGACAACATTAGAGATGT
TATCCCCTTCCCAAGATATCCCGGAAGAGCAGATCTCTAATCTTGAATTT
GCAAACATGCCTTTTTGAAAAATCACTAGTTATTACATCTTTTGCTGATT
CCAAACAATGTTAAACCAGGAAACCATAACATTGAAATTTATGTTTGCCA
TATTCTTAATGATAGAGATATTTTCTGGATTTGTCTTCTGNCAGCGTTTA
CGGCGGAATTATGATTTATTATTAGAGAATATATTAATAGAATTTTGATT
GTAATAAAAAAAAAAAAAAAAA
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