FC929270
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC929270 vs. ExPASy Swiss-Prot
Match: SYN_LACGA (Asparaginyl-tRNA synthetase OS=Lactobacillus gasseri (strain ATCC 33323 / DSM 20243) GN=asnS PE=3 SV=1) HSP 1 Score: 139.043 bits (349), Expect = 2.982e-32 Identity = 67/135 (49.63%), Postives = 93/135 (68.89%), Query Frame = 3 Query: 180 VEWGIDLASEHERYLTEVKFQKPVIVYNYPKGIKAFYMRLN-DDLKTVAAMDVLVPK-VGELIGGSQREERYDVIKSRIEDMGLPLEPYEWYLDLRRFGTVKHSGFGLGFERMILFATGIDNIRDVIPFPRYPGR 578 ++WG D + E Y++E +F +PV + NYP IK FYM+ N D+ K DV+ P+ GE+ GGS+RE Y+++K +IE+ GL LE Y+WYLDLR+FG V HSGFG+GFER I + +D+IR+ IPFPR R Sbjct: 296 IKWGDDFGAPDEGYISE-QFDRPVFIVNYPTTIKPFYMKKNPDNPKEYLCADVIAPEGYGEIFGGSEREGNYEILKKQIEEAGLNLEDYQWYLDLRKFGGVPHSGFGMGFERTIAWICKLDHIREAIPFPRLINR 429
BLAST of FC929270 vs. ExPASy Swiss-Prot
Match: SYN_ENTFA (Asparaginyl-tRNA synthetase OS=Enterococcus faecalis GN=asnS PE=3 SV=1) HSP 1 Score: 139.043 bits (349), Expect = 2.982e-32 Identity = 72/169 (42.60%), Postives = 101/169 (59.76%), Query Frame = 3 Query: 78 LRMVASTPFERITYTXXXXXXXXXXKEGKHFENKVEWGIDLASEHERYLTEVKFQKPVIVYNYPKGIKAFYMRLNDDLKTVA-AMDVLVPK-VGELIGGSQREERYDVIKSRIEDMGLPLEPYEWYLDLRRFGTVKHSGFGLGFERMILFATGIDNIRDVIPFPRYPGR 578 L S PF+RITY +E + + +EWG D S HE +++ + P + NYPK IKAFYM+ + + V D++ P+ GE+IGGS+R YD +K ++ + GL E Y WYLDLR++G+V HSGFGLG ER + F TG ++IR+ IPFPR R Sbjct: 282 LEKYVSEPFKRITYDDAIELLQK--EEANNDYDHIEWGEDFGSPHETFISNY-YGVPTFILNYPKAIKAFYMKPHPTREDVVICADLIAPEGYGEIIGGSERATDYDYLKEKVAEFGLSEEEYSWYLDLRKYGSVPHSGFGLGLERAVTFITGNEHIREAIPFPRMLNR 447
BLAST of FC929270 vs. ExPASy Swiss-Prot
Match: SYN_SYMTH (Asparaginyl-tRNA synthetase OS=Symbiobacterium thermophilum GN=asnS PE=3 SV=1) HSP 1 Score: 138.658 bits (348), Expect = 3.895e-32 Identity = 73/162 (45.06%), Postives = 101/162 (62.35%), Query Frame = 3 Query: 99 PFERITYTXXXXXXXXXXKEGKHFENKVEWGIDLASEHERYLTEVKFQKPVIVYNYPKGIKAFYMRLN-DDLKTVAAMDVLVPK-VGELIGGSQREERYDVIKSRIEDMGLPLEPYEWYLDLRRFGTVKHSGFGLGFERMILFATGIDNIRDVIPFPRYPGR 578 PF RITYT K G +E +EWG D + HE LT+ +F+KPV V +P +KAFYM+ + ++ V D+L P+ GE+IGGSQR +++K R E+ GL + Y WY DLRRFG+V HSGFGLG ER + + G++++R+ IPFPR R Sbjct: 275 PFPRITYTEAVEMLKKLHKPGDEWE-PIEWGEDFGAPHETVLTQ-QFEKPVFVEKFPVKVKAFYMQPDPENPDVVLGADLLAPEGYGEIIGGSQRIHDPELLKRRFEEHGLDMNTYGWYYDLRRFGSVPHSGFGLGIERTVAWICGLEHVRETIPFPRLLNR 434
BLAST of FC929270 vs. ExPASy Swiss-Prot
Match: SYN1_LACPL (Asparaginyl-tRNA synthetase 1 OS=Lactobacillus plantarum GN=asnS1 PE=3 SV=1) HSP 1 Score: 138.658 bits (348), Expect = 3.895e-32 Identity = 77/190 (40.53%), Postives = 113/190 (59.47%), Query Frame = 3 Query: 9 LLDHCFDDMEFMAKNYDKSCINRLRMVASTPFERITYTXXXXXXXXXXKEGKHFENKVEWGIDLASEHERYLTEVKFQKPVIVYNYPKGIKAFYMRLN---DDLKTVAAMDVLVPK-VGELIGGSQREERYDVIKSRIEDMGLPLEPYEWYLDLRRFGTVKHSGFGLGFERMILFATGIDNIRDVIPFPR 566 ++DHC ++ + ++ + L+ PF R++Y + F+ V+WG+D S E +L E F +PV V NYPK IKAFYM+ + DD+ V A D+L P+ GE+IGGS+R YD +K R+ G L+ YEWYLDLR++G+V HSGFG+G ER + + T D++R+ IPFPR Sbjct: 250 VIDHCPHELAVLDRD-----VATLQKYTKLPFPRVSYDDAITLL-----QANGFD--VDWGVDFGSPEETFLAE-HFDQPVFVLNYPKAIKAFYMQAHPTRDDV--VIAADLLAPEGYGEIIGGSERSTDYDYLKERLLASGQDLQDYEWYLDLRKYGSVPHSGFGMGLERFLAWITLQDHVRETIPFPR 424
BLAST of FC929270 vs. ExPASy Swiss-Prot
Match: SYN_LEPIN (Asparaginyl-tRNA synthetase OS=Leptospira interrogans GN=asnS PE=3 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 6.644e-32 Identity = 67/131 (51.15%), Postives = 96/131 (73.28%), Query Frame = 3 Query: 180 VEWGIDLASEHERYLTEVKFQKPVIVYNYPKGIKAFYMRLN-DDLKTVAAMDVLVPK-VGELIGGSQREERYDVIKSRIEDMGLPLEPYEWYLDLRRFGTVKHSGFGLGFERMILFATGIDNIRDVIPFPR 566 + WG D+ SE E+ LT V+F PV + YP+ KAFYM++N +D +TV D++ P VGE+IGGS+REE Y+ I R+++ LP+E Y+WYLDLR++G+V HSGFGLG ER+I + G+ ++R+ IPFPR Sbjct: 299 IVWGDDINSEREQLLT-VEFGGPVFIQKYPREAKAFYMKVNPEDPRTVLNADLIAPDGVGEIIGGSEREENYENIVQRLKEEKLPVESYDWYLDLRKYGSVPHSGFGLGSERLIAWICGLAHVRECIPFPR 428
BLAST of FC929270 vs. ExPASy Swiss-Prot
Match: SYN_LEPIC (Asparaginyl-tRNA synthetase OS=Leptospira interrogans serogroup Icterohaemorrhagiae serovar copenhageni GN=asnS PE=3 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 6.644e-32 Identity = 67/131 (51.15%), Postives = 96/131 (73.28%), Query Frame = 3 Query: 180 VEWGIDLASEHERYLTEVKFQKPVIVYNYPKGIKAFYMRLN-DDLKTVAAMDVLVPK-VGELIGGSQREERYDVIKSRIEDMGLPLEPYEWYLDLRRFGTVKHSGFGLGFERMILFATGIDNIRDVIPFPR 566 + WG D+ SE E+ LT V+F PV + YP+ KAFYM++N +D +TV D++ P VGE+IGGS+REE Y+ I R+++ LP+E Y+WYLDLR++G+V HSGFGLG ER+I + G+ ++R+ IPFPR Sbjct: 299 IVWGDDINSEREQILT-VEFGGPVFIQKYPREAKAFYMKVNPEDPRTVLNADLIAPDGVGEIIGGSEREENYENIVQRLKEEKLPVESYDWYLDLRKYGSVPHSGFGLGSERLIAWICGLAHVRECIPFPR 428
BLAST of FC929270 vs. ExPASy Swiss-Prot
Match: SYN_LACC3 (Asparaginyl-tRNA synthetase OS=Lactobacillus casei (strain ATCC 334) GN=asnS PE=3 SV=1) HSP 1 Score: 137.117 bits (344), Expect = 1.133e-31 Identity = 80/193 (41.45%), Postives = 113/193 (58.55%), Query Frame = 3 Query: 9 LLDHCFDDMEFMAKNYDKSCINRLRMVASTPFERITYTXXXXXXXXXXKEGKHFENKVEWGIDLASEHERYLTEVKFQKPVIVYNYPKGIKAFYMRLN--DDLKTVAAMDVLVPK-VGELIGGSQREERYDVIKSRIEDMGLPLEPYEWYLDLRRFGTVKHSGFGLGFERMILFATGIDNIRDVIPFPRYPGR 578 +LD+C + + ++ + L+ P+ RITY + V++G D S E YL++ +F +PV V NYPK IK FYM + DD + V A D+L P+ GE+IGGS+RE YD +K+ IE GL L+ YEWYLDLR++G+V HSGFGLG ER I + +D++R+ IPFPR R Sbjct: 251 VLDNCAYPLHLLDRDPEV-----LKQYTKLPYPRITYKQAIKMLQDAGMD-------VKYGDDFGSPEETYLSD-QFDQPVFVLNYPKTIKPFYMLTDPEDDQQYVCA-DMLAPEGYGEIIGGSERETDYDTLKNAIEHAGLDLDEYEWYLDLRKYGSVPHSGFGLGLERAITWVCKLDHLREAIPFPRMINR 429
BLAST of FC929270 vs. ExPASy Swiss-Prot
Match: SYN_PYRFU (Asparaginyl-tRNA synthetase OS=Pyrococcus furiosus GN=asnS PE=3 SV=2) HSP 1 Score: 135.961 bits (341), Expect = 2.525e-31 Identity = 69/135 (51.11%), Postives = 96/135 (71.11%), Query Frame = 3 Query: 180 VEWGIDLASEHERYLTEVKFQKPVIVYNYPKGIKAFYMRLN-DDLKTVAAMDVLVPK-VGELIGGSQREERYDVIKSRIEDMGLPLEPYEWYLDLRRFGTVKHSGFGLGFERMILFATGIDNIRDVIPFPRYPGR 578 V+WG DL ++ ER LTE +F +P VY YPK IKAFYM+ + +D + V A D+L P+ GE+IGGSQRE+ Y+ + +RI + G+ + YEWYLDLR++G+V HSGFGLG ER++ + +D+IR FPR P R Sbjct: 298 VQWGDDLGADEERVLTE-EFDRPFFVYGYPKQIKAFYMKEDPNDPRKVLAADMLAPEGYGEIIGGSQREDDYEKLLNRILEEGMDPKDYEWYLDLRKYGSVPHSGFGLGVERLVAWVLKLDHIRWASLFPRTPAR 431
BLAST of FC929270 vs. ExPASy Swiss-Prot
Match: SYN_ACIBL (Asparaginyl-tRNA synthetase OS=Acidobacteria bacterium (strain Ellin345) GN=asnS PE=3 SV=1) HSP 1 Score: 135.961 bits (341), Expect = 2.525e-31 Identity = 71/159 (44.65%), Postives = 102/159 (64.15%), Query Frame = 3 Query: 96 TPFERITYTXXXXXXXXXXKEGKHFENKVEWGIDLASEHERYLTEVKFQKPVIVYNYPKGIKAFYMRLNDDLKTVA-AMDVLVPK-VGELIGGSQREERYDVIKSRIEDMGLPLEPYEWYLDLRRFGTVKHSGFGLGFERMILFATGIDNIRDVIPFPR 566 TPF RI+Y +G+ E++ EWG DL S E Y++ KF +PV+++ YP +KAFYM + + VA +DVL P+ GE+IGGSQR Y+ + +RI + LP E ++WYLDLR+FG V HSGFG+G ER + + G+D++R+ IPF R Sbjct: 279 TPFPRISYDEAVQMLQEGHAKGE-LESRFEWGGDLGSPDETYISS-KFDRPVMIHRYPVEVKAFYMEPDPNNSKVALCVDVLAPEGYGEVIGGSQRMGSYEKLLARIHEHQLPEESFKWYLDLRKFGGVPHSGFGMGIERAVAWICGLDHVRETIPFAR 435
BLAST of FC929270 vs. ExPASy Swiss-Prot
Match: SYN_LACH4 (Asparaginyl-tRNA synthetase OS=Lactobacillus helveticus (strain DPC 4571) GN=asnS PE=3 SV=1) HSP 1 Score: 135.191 bits (339), Expect = 4.307e-31 Identity = 66/134 (49.25%), Postives = 91/134 (67.91%), Query Frame = 3 Query: 183 EWGIDLASEHERYLTEVKFQKPVIVYNYPKGIKAFYMRLN-DDLKTVAAMDVLVPK-VGELIGGSQREERYDVIKSRIEDMGLPLEPYEWYLDLRRFGTVKHSGFGLGFERMILFATGIDNIRDVIPFPRYPGR 578 +WG D + E Y++E ++ +PV + NYP IK FYM+ N D+ K DV+ P+ GE+ GGS+RE Y+V++ +I D GL LE Y+WYLDLR+FG V HSGFG+GFER I + +D+IR+ IPFPR R Sbjct: 297 KWGDDFGAPDEGYISE-QYDRPVFIVNYPTSIKPFYMKKNPDNPKEYLCADVIAPEGYGEIFGGSEREGNYEVLEQQIIDAGLNLEDYQWYLDLRKFGGVPHSGFGMGFERTIAWVCHLDHIREAIPFPRLINR 429 The following BLAST results are available for this feature:
BLAST of FC929270 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 320
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Sequences
The
following sequences are available for this feature:
EST sequence >FC929270 ID=FC929270; Name=FC929270; organism=Citrus clementina; type=EST; length=822bpback to top |