FC929270
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC929270 vs. ExPASy Swiss-Prot
Match: SYN_BACSK (Asparaginyl-tRNA synthetase OS=Bacillus clausii (strain KSM-K16) GN=asnS PE=3 SV=1) HSP 1 Score: 134.806 bits (338), Expect = 5.625e-31 Identity = 74/192 (38.54%), Postives = 113/192 (58.85%), Query Frame = 3 Query: 9 LLDHCFDDMEFMAKNYDKSCINRLRMVASTPFERITYTXXXXXXXXXXKEGKHFENKVEWGIDLASEHERYLTEVKFQKPVIVYNYPKGIKAFYMRLNDDLKTVA-AMDVLVPK-VGELIGGSQREERYDVIKSRIEDMGLPLEPYEWYLDLRRFGTVKHSGFGLGFERMILFATGIDNIRDVIPFPRYPGR 578 +LDHC +++ + ++ + +L + + PF RITY + K F++ + WG D S HE + E F KPV + YP+ +K FYM+ D V D++ P+ GE+IGGS+R YD++K +E LPL+ Y WYLDLR++G+V HSGFGLG ER + + +G +++R+ IPFPR R Sbjct: 249 VLDHCQLELKQLGRD-----VTKLEAIKA-PFPRITYDEALDLL-----KEKGFDD-ISWGDDFGSPHETAIAE-HFDKPVFITRYPRSLKPFYMQPAPDRDDVVLCADLIAPEGYGEIIGGSERIHDYDLLKQELEKHNLPLDAYGWYLDLRKYGSVPHSGFGLGLERTVAWLSGTEHVRETIPFPRLLNR 427
BLAST of FC929270 vs. ExPASy Swiss-Prot
Match: SYN_GEOTN (Asparaginyl-tRNA synthetase OS=Geobacillus thermodenitrificans (strain NG80-2) GN=asnS PE=3 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 7.346e-31 Identity = 71/172 (41.28%), Postives = 105/172 (61.05%), Query Frame = 3 Query: 69 INRLRMVASTPFERITYTXXXXXXXXXXKEGKHFENKVEWGIDLASEHERYLTEVKFQKPVIVYNYPKGIKAFYMRLNDDLKTVA-AMDVLVPK-VGELIGGSQREERYDVIKSRIEDMGLPLEPYEWYLDLRRFGTVKHSGFGLGFERMILFATGIDNIRDVIPFPRYPGR 578 + +L +V PF R+TY K F + +EWG D + HE + E F KPV + +YP +K FYM+ + + V D++ P+ GE+IGGS+R Y+++K R+E+ LPLE YEWYLDLR++G+V HSGFGLG ER + + G++++R+ IPFPR R Sbjct: 264 VTKLELV-KPPFPRLTYDEAIKLL-----HDKGFTD-IEWGDDFGAPHETAIAE-SFDKPVFITHYPTSLKPFYMQPDPNRPDVVLCADLIAPEGYGEIIGGSERIHDYELLKQRLEEHHLPLEAYEWYLDLRKYGSVPHSGFGLGLERTVAWICGVEHVRETIPFPRLLNR 427
BLAST of FC929270 vs. ExPASy Swiss-Prot
Match: SYN_LACS1 (Asparaginyl-tRNA synthetase OS=Lactobacillus salivarius subsp. salivarius (strain UCC118) GN=asnS PE=3 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 2.791e-30 Identity = 80/194 (41.24%), Postives = 111/194 (57.22%), Query Frame = 3 Query: 9 LLDHCFDDMEFMAKNYDKSCINRLRMVASTPFERITYTXXXXXXXXXXKEGKHFENKVEWGIDLASEHERYLTEVKFQKPVIVYNYPKGIKAFYMR---LNDDLKTVAAMDVLVPK-VGELIGGSQREERYDVIKSRIEDMGLPLEPYEWYLDLRRFGTVKHSGFGLGFERMILFATGIDNIRDVIPFPRYPGR 578 +LD+C ++ + ++ + L+ P+ RI+Y + GK + V+WG D S E YL E F KPV V NYPK IK FYM+ DD+ V D+L P+ GE+IGGS+R ++ +I GL ++ YEWYLDLRR+G+V HSGFGLG ER + + TG D+IR+ IPFPR R Sbjct: 250 VLDNCQYPLQILGRDTEV-----LKRYTELPYPRISYDEAIELLQ---QSGKFPD--VKWGEDFGSPEETYLAE-HFSKPVFVMNYPKAIKPFYMKPHPTRDDV--VICADMLAPEGYGEIIGGSERATDPKYLEEQIIKAGLDVKDYEWYLDLRRYGSVPHSGFGLGLERAVTWITGEDHIREAIPFPRLLNR 430
BLAST of FC929270 vs. ExPASy Swiss-Prot
Match: SYN_LACLS (Asparaginyl-tRNA synthetase OS=Lactococcus lactis subsp. cremoris (strain SK11) GN=asnS PE=3 SV=1) HSP 1 Score: 132.109 bits (331), Expect = 3.646e-30 Identity = 68/169 (40.24%), Postives = 99/169 (58.58%), Query Frame = 3 Query: 78 LRMVASTPFERITYTXXXXXXXXXXKEGKHFENKVEWGIDLASEHERYLTEVKFQKPVIVYNYPKGIKAFYMR-LNDDLKTVAAMDVLVPK-VGELIGGSQREERYDVIKSRIEDMGLPLEPYEWYLDLRRFGTVKHSGFGLGFERMILFATGIDNIRDVIPFPRYPGR 578 L+ TPF+R++Y + VE G D S HE +++ + P + NYP KAFYM+ + + + V D+L P+ GE+IGGS+RE YD++ +I D GL + Y+WYL+LR+FG+V H+GFGLG ERM+ F G ++IR+ IPFPR R Sbjct: 277 LQKYIDTPFKRVSYDDAIDLLQAHENDDDTDYEHVEHGDDFGSPHETWISNY-YGVPTFIVNYPASFKAFYMKPVPGNPERVLCADLLAPEGYGEIIGGSERETDYDLLLKKIADFGLDPKDYDWYLELRKFGSVPHAGFGLGLERMVTFVAGTEHIREAIPFPRMINR 444
BLAST of FC929270 vs. ExPASy Swiss-Prot
Match: SYN_STRR6 (Asparaginyl-tRNA synthetase OS=Streptococcus pneumoniae (strain ATCC BAA-255 / R6) GN=asnS PE=3 SV=1) HSP 1 Score: 131.724 bits (330), Expect = 4.761e-30 Identity = 69/165 (41.82%), Postives = 99/165 (60.00%), Query Frame = 3 Query: 78 LRMVASTPFERITYTXXXXXXXXXXKEGKHFENKVEWGIDLASEHERYLTEVKFQKPVIVYNYPKGIKAFYMR-LNDDLKTVAAMDVLVPK-VGELIGGSQREERYDVIKSRIEDMGLPLEPYEWYLDLRRFGTVKHSGFGLGFERMILFATGIDNIRDVIPFPR 566 L+ + PF+RITY + +E G D S HE +++ F P V NYP IKAFYM+ + + + V D+L P+ GE+IGGS REE YD + ++++++G+ YE+YLDLR++GTV H GFG+G ERM+ FA G +IR+ IPFPR Sbjct: 277 LKRYIAEPFKRITYDQAIDLLQEHENDEDADYEHLEHGDDFGSPHETWISN-HFGVPTFVMNYPAAIKAFYMKPVPGNPERVLCADLLAPEGYGEIIGGSMREEDYDALVAKMDELGMDRTEYEFYLDLRKYGTVPHGGFGIGIERMVTFAAGTKHIREAIPFPR 440
BLAST of FC929270 vs. ExPASy Swiss-Prot
Match: SYN_STRPN (Asparaginyl-tRNA synthetase OS=Streptococcus pneumoniae GN=asnS PE=3 SV=1) HSP 1 Score: 131.724 bits (330), Expect = 4.761e-30 Identity = 69/165 (41.82%), Postives = 99/165 (60.00%), Query Frame = 3 Query: 78 LRMVASTPFERITYTXXXXXXXXXXKEGKHFENKVEWGIDLASEHERYLTEVKFQKPVIVYNYPKGIKAFYMR-LNDDLKTVAAMDVLVPK-VGELIGGSQREERYDVIKSRIEDMGLPLEPYEWYLDLRRFGTVKHSGFGLGFERMILFATGIDNIRDVIPFPR 566 L+ + PF+RITY + +E G D S HE +++ F P V NYP IKAFYM+ + + + V D+L P+ GE+IGGS REE YD + ++++++G+ YE+YLDLR++GTV H GFG+G ERM+ FA G +IR+ IPFPR Sbjct: 277 LKRYIAEPFKRITYDQAIDLLQEHENDEDADYEHLEHGDDFGSPHETWISN-HFGVPTFVMNYPAAIKAFYMKPVPGNPERVLCADLLAPEGYGEIIGGSMREEDYDALVAKMDELGMDRTEYEFYLDLRKYGTVPHGGFGIGIERMVTFAAGTKHIREAIPFPR 440
BLAST of FC929270 vs. ExPASy Swiss-Prot
Match: SYN_STRP2 (Asparaginyl-tRNA synthetase OS=Streptococcus pneumoniae serotype 2 (strain D39 / NCTC 7466) GN=asnS PE=3 SV=1) HSP 1 Score: 131.724 bits (330), Expect = 4.761e-30 Identity = 69/165 (41.82%), Postives = 99/165 (60.00%), Query Frame = 3 Query: 78 LRMVASTPFERITYTXXXXXXXXXXKEGKHFENKVEWGIDLASEHERYLTEVKFQKPVIVYNYPKGIKAFYMR-LNDDLKTVAAMDVLVPK-VGELIGGSQREERYDVIKSRIEDMGLPLEPYEWYLDLRRFGTVKHSGFGLGFERMILFATGIDNIRDVIPFPR 566 L+ + PF+RITY + +E G D S HE +++ F P V NYP IKAFYM+ + + + V D+L P+ GE+IGGS REE YD + ++++++G+ YE+YLDLR++GTV H GFG+G ERM+ FA G +IR+ IPFPR Sbjct: 277 LKRYIAEPFKRITYDQAIDLLQEHENDEDADYEHLEHGDDFGSPHETWISN-HFGVPTFVMNYPAAIKAFYMKPVPGNPERVLCADLLAPEGYGEIIGGSMREEDYDALVAKMDELGMDRTEYEFYLDLRKYGTVPHGGFGIGIERMVTFAAGTKHIREAIPFPR 440
BLAST of FC929270 vs. ExPASy Swiss-Prot
Match: SYN_LACLM (Asparaginyl-tRNA synthetase OS=Lactococcus lactis subsp. cremoris (strain MG1363) GN=asnS PE=3 SV=1) HSP 1 Score: 131.724 bits (330), Expect = 4.761e-30 Identity = 68/169 (40.24%), Postives = 99/169 (58.58%), Query Frame = 3 Query: 78 LRMVASTPFERITYTXXXXXXXXXXKEGKHFENKVEWGIDLASEHERYLTEVKFQKPVIVYNYPKGIKAFYMR-LNDDLKTVAAMDVLVPK-VGELIGGSQREERYDVIKSRIEDMGLPLEPYEWYLDLRRFGTVKHSGFGLGFERMILFATGIDNIRDVIPFPRYPGR 578 L+ TPF+R++Y + VE G D S HE +++ + P + NYP KAFYM+ + + + V D+L P+ GE+IGGS+RE YD++ +I D GL + Y+WYL+LR+FG+V H+GFGLG ERM+ F G ++IR+ IPFPR R Sbjct: 277 LQKYIDTPFKRVSYDDAIDLLQAHENDEDTDYEHVEHGDDFGSPHETWISNY-YGVPTFIVNYPASFKAFYMKPVPGNPERVLCADLLAPEGYGEIIGGSERETDYDLLLKKIADFGLDPKDYDWYLELRKFGSVPHAGFGLGLERMVTFVAGTEHIREAIPFPRMINR 444
BLAST of FC929270 vs. ExPASy Swiss-Prot
Match: SYN_LACLA (Asparaginyl-tRNA synthetase OS=Lactococcus lactis subsp. lactis GN=asnS PE=3 SV=1) HSP 1 Score: 131.724 bits (330), Expect = 4.761e-30 Identity = 68/169 (40.24%), Postives = 99/169 (58.58%), Query Frame = 3 Query: 78 LRMVASTPFERITYTXXXXXXXXXXKEGKHFENKVEWGIDLASEHERYLTEVKFQKPVIVYNYPKGIKAFYMR-LNDDLKTVAAMDVLVPK-VGELIGGSQREERYDVIKSRIEDMGLPLEPYEWYLDLRRFGTVKHSGFGLGFERMILFATGIDNIRDVIPFPRYPGR 578 L+ TPF+R++Y + VE G D S HE +++ + P + NYP KAFYM+ + + + V D+L P+ GE+IGGS+RE YD++ +I D GL + Y+WYL+LR+FG+V H+GFGLG ERM+ F G ++IR+ IPFPR R Sbjct: 277 LQKYIDTPFKRVSYDAAIDLLQAHENDEDTDYEHVEHGDDFGSPHETWISNY-YGVPTFIVNYPASFKAFYMKPVPGNPERVLCADLLAPEGYGEIIGGSERETDYDLLLKKIADFGLDPKDYDWYLELRKFGSVPHAGFGLGLERMVTFVAGTEHIREAIPFPRMINR 444
BLAST of FC929270 vs. ExPASy Swiss-Prot
Match: SYN_HERA2 (Asparaginyl-tRNA synthetase OS=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) GN=asnS PE=3 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 6.219e-30 Identity = 73/194 (37.63%), Postives = 110/194 (56.70%), Query Frame = 3 Query: 9 LLDHCFDDMEFMAKNYDKSCINRLRMVASTPFERITYTXXXXXXXXXXKEGKHFENK------VEWGIDLASEHERYLTEVKFQKPVIVYNYPKGIKAFYMRLNDDL-KTVAAMDVLVPK-VGELIGGSQREERYDVIKSRIEDMGLPLEPYEWYLDLRRFGTVKHSGFGLGFERMILFATGIDNIRDVIPFPR 566 +LD C +D++ + ++ K L + PF RI+Y G +EWG D + HE YL + F KP+ +YNYP +KAFYM+ + + V D++ P+ GE+IGGSQR +++++RI + GL + Y+WYLDLRR+G+V HSGFG+G ER + + G +IR+ IPFPR Sbjct: 254 VLDRCEEDLKILERDTSK-----LENIVP-PFPRISYDEAIEKIKQGVAAGATVAPDNAPLADLEWGDDFGAPHETYLASL-FDKPLFIYNYPTKVKAFYMQPAEGRPEVVRCADLIAPEGYGEIIGGSQRIHDAELLEARIREHGLDVADYQWYLDLRRYGSVPHSGFGMGIERCVAWLAGTRHIREAIPFPR 440 The following BLAST results are available for this feature:
BLAST of FC929270 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 320
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Sequences
The
following sequences are available for this feature:
EST sequence >FC929270 ID=FC929270; Name=FC929270; organism=Citrus clementina; type=EST; length=822bpback to top |