FC929270
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC929270 vs. ExPASy Swiss-Prot
Match: SYN2_LACPL (Asparaginyl-tRNA synthetase 2 OS=Lactobacillus plantarum GN=asnS2 PE=3 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 8.122e-30 Identity = 72/194 (37.11%), Postives = 109/194 (56.19%), Query Frame = 3 Query: 9 LLDHCFDDMEFMAKNYDKSCINRLRMVASTPFERITYTXXXXXXXXXXKEGKHFENKVEWGIDLASEHERYLTEVKFQKPVIVYNYPKGIKAFYMR---LNDDLKTVAAMDVLVPK-VGELIGGSQREERYDVIKSRIEDMGLPLEPYEWYLDLRRFGTVKHSGFGLGFERMILFATGIDNIRDVIPFPRYPGR 578 ++DHC ++ + ++ + L+ P+ RI+Y K + V+WG+D S E +L + F +PV V NYPK IK FYM+ DD+ V D+L P+ GE+IGGS+R Y+ + +I+ GL + Y WYLDLR++G+V H+GFGLG ER + + T D++R+ IPFPR R Sbjct: 251 VIDHCQYALDILGRD-----VETLKKYTKLPYPRISYDEAIELL-------KENDFDVDWGVDFGSPEETFLAD-HFDQPVFVLNYPKAIKPFYMKPHPTRDDV--VICADLLAPEGYGEIIGGSERATDYNYLLDQIKQAGLNPDDYAWYLDLRKYGSVPHAGFGLGLERFLTWITAEDHVRETIPFPRLLNR 429
BLAST of FC929270 vs. ExPASy Swiss-Prot
Match: SYN_DESRM (Asparaginyl-tRNA synthetase OS=Desulfotomaculum reducens (strain MI-1) GN=asnS PE=3 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 1.061e-29 Identity = 71/188 (37.77%), Postives = 114/188 (60.64%), Query Frame = 3 Query: 9 LLDHCFDDMEFMAKNYDKSCINRLRMVASTPFERITYTXXXXXXXXXXKEGKHFENKVEWGIDLASEHERYLTEVKFQKPVIVYNYPKGIKAFYMRLN-DDLKTVAAMDVLVPK-VGELIGGSQREERYDVIKSRIEDMGLPLEPYEWYLDLRRFGTVKHSGFGLGFERMILFATGIDNIRDVIPFPR 566 +L+ D+E + ++ I++L + PF R++YT +G+ FE WG D + HE ++E F+ PV ++ YP IKAFYM+ + +D + V D++ P+ GE+IGG QR + +++ R+E+ LP E +EWYLDLRR+G+V HSGFGLG ER + + +D++R+ IP+PR Sbjct: 249 VLERRRQDLELLGRD-----ISKLEAI-KLPFPRLSYTEAVELLK---SKGEAFE----WGEDFGAPHETIISE-NFESPVFIHRYPTEIKAFYMKPDPEDGRVVLGADLIAPEGYGEMIGGGQRIDDLQLLEQRLEEHKLPKEAFEWYLDLRRYGSVPHSGFGLGLERTVAWICKLDHVRETIPYPR 422
BLAST of FC929270 vs. ExPASy Swiss-Prot
Match: SYN_CHLSY (Asparaginyl-tRNA synthetase OS=Chloroflexus aurantiacus (strain ATCC 29364 / DSM 637 / Y-400-fl) GN=asnS PE=3 SV=1) HSP 1 Score: 129.798 bits (325), Expect = 1.809e-29 Identity = 75/188 (39.89%), Postives = 111/188 (59.04%), Query Frame = 3 Query: 9 LLDHCFDDMEFMAKNYDKSCINRLRMVASTPFERITYTXXXXXXXXXXKEGKHFENKVEWGIDLASEHERYLTEVKFQKPVIVYNYPKGIKAFYMRLNDDLKTVA-AMDVLVPK-VGELIGGSQREERYDVIKSRIEDMGLPLEPYEWYLDLRRFGTVKHSGFGLGFERMILFATGIDNIRDVIPFPR 566 +L+ DD++ + + D + + ++R PF RITY E + + + WG D + HE + KF +PV V +P +KAFYM+ + + VA D+L P+ GE+IGGSQR +++ RI + GL +E YEWYLDLRR+GTV HSGFG+G ER++ + TG +IR+ IPFPR Sbjct: 254 VLERRRDDLQTLER--DTTLLEQVR----PPFPRITYDEAIELIAAHQGEVEGAD-PLPWGEDFGAPHETLIAS-KFDRPVFVERFPSAVKAFYMQPDPERPEVALCADLLAPEGYGEIIGGSQRIHDPILLEQRIREHGLRIEDYEWYLDLRRYGTVPHSGFGMGIERVVAWITGTRHIRETIPFPR 433
BLAST of FC929270 vs. ExPASy Swiss-Prot
Match: SYN_CHLAA (Asparaginyl-tRNA synthetase OS=Chloroflexus aurantiacus (strain ATCC 29366 / DSM 635 / J-10-fl) GN=asnS PE=3 SV=1) HSP 1 Score: 129.798 bits (325), Expect = 1.809e-29 Identity = 75/188 (39.89%), Postives = 111/188 (59.04%), Query Frame = 3 Query: 9 LLDHCFDDMEFMAKNYDKSCINRLRMVASTPFERITYTXXXXXXXXXXKEGKHFENKVEWGIDLASEHERYLTEVKFQKPVIVYNYPKGIKAFYMRLNDDLKTVA-AMDVLVPK-VGELIGGSQREERYDVIKSRIEDMGLPLEPYEWYLDLRRFGTVKHSGFGLGFERMILFATGIDNIRDVIPFPR 566 +L+ DD++ + + D + + ++R PF RITY E + + + WG D + HE + KF +PV V +P +KAFYM+ + + VA D+L P+ GE+IGGSQR +++ RI + GL +E YEWYLDLRR+GTV HSGFG+G ER++ + TG +IR+ IPFPR Sbjct: 254 VLERRRDDLQTLER--DTTLLEQVR----PPFPRITYDEAIELIAAHQGEVEGAD-PLPWGEDFGAPHETLIAS-KFDRPVFVERFPSAVKAFYMQPDPERPEVALCADLLAPEGYGEIIGGSQRIHDPILLEQRIREHGLRIEDYEWYLDLRRYGTVPHSGFGMGIERVVAWITGTRHIRETIPFPR 433
BLAST of FC929270 vs. ExPASy Swiss-Prot
Match: SYN_BACHD (Asparaginyl-tRNA synthetase OS=Bacillus halodurans GN=asnS PE=3 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 2.363e-29 Identity = 75/194 (38.66%), Postives = 113/194 (58.25%), Query Frame = 3 Query: 9 LLDHCFDDMEFMAKNYDKSCINRLRMVASTPFERITYTXXXXXXXXXXKEGKHFENKVEWGIDLASEHERYLTEVKFQKPVIVYNYPKGIKAFYMRLN---DDLKTVAAMDVLVPK-VGELIGGSQREERYDVIKSRIEDMGLPLEPYEWYLDLRRFGTVKHSGFGLGFERMILFATGIDNIRDVIPFPRYPGR 578 +L HC +++ + + D S + ++ PF RI+Y K F++ +EWG D + HE + E F KPV + +YP +K FYM + DD+ V D++ P+ GE+IGGSQR YD++K R+E+ L L+ Y WYLDLR++G+V HSGFGLG ER + + +G ++R+ IPFPR R Sbjct: 249 VLKHCAIELKTLGR--DTSVLESIQ----APFPRISYDDAIKFLHE-----KGFDD-IEWGDDFGAPHETAIAE-HFDKPVFITHYPTSLKPFYMEPDPNRDDV--VLCADLIAPEGYGEIIGGSQRISDYDLLKKRLEEHDLSLDAYAWYLDLRKYGSVPHSGFGLGLERTVGWISGAGHVRETIPFPRLLNR 427
BLAST of FC929270 vs. ExPASy Swiss-Prot
Match: SYN_STRSV (Asparaginyl-tRNA synthetase OS=Streptococcus sanguinis (strain SK36) GN=asnS PE=3 SV=1) HSP 1 Score: 129.028 bits (323), Expect = 3.086e-29 Identity = 67/168 (39.88%), Postives = 97/168 (57.74%), Query Frame = 3 Query: 69 INRLRMVASTPFERITYTXXXXXXXXXXKEGKHFENKVEWGIDLASEHERYLTEVKFQKPVIVYNYPKGIKAFYMR-LNDDLKTVAAMDVLVPK-VGELIGGSQREERYDVIKSRIEDMGLPLEPYEWYLDLRRFGTVKHSGFGLGFERMILFATGIDNIRDVIPFPR 566 + L+ + PF+R++Y + +E G D S HE +++ F P V NYP IKAFYM+ + + V D+L P+ GE+IGGS REE YD + +++ D+G+ YE+YLDLR++GTV H GFG+G ERM+ F G +IR+ IPFPR Sbjct: 275 VELLKRYIAEPFKRVSYDEAIDLLQAHENDEDADYEHLEHGDDFGSPHETWISN-HFGVPTFVVNYPAAIKAFYMKPVPGNPDRVLCADLLAPEGYGEIIGGSMREEDYDALVAKMNDLGMDTTEYEFYLDLRKYGTVPHGGFGIGIERMVTFVAGTKHIREAIPFPR 441
BLAST of FC929270 vs. ExPASy Swiss-Prot
Match: SYN_CHLAD (Asparaginyl-tRNA synthetase OS=Chloroflexus aggregans (strain MD-66 / DSM 9485) GN=asnS PE=3 SV=1) HSP 1 Score: 129.028 bits (323), Expect = 3.086e-29 Identity = 77/188 (40.96%), Postives = 109/188 (57.98%), Query Frame = 3 Query: 9 LLDHCFDDMEFMAKNYDKSCINRLRMVASTPFERITYTXXXXXXXXXXKEGKHFENKVEWGIDLASEHERYLTEVKFQKPVIVYNYPKGIKAFYMRLNDDLKTVA-AMDVLVPK-VGELIGGSQREERYDVIKSRIEDMGLPLEPYEWYLDLRRFGTVKHSGFGLGFERMILFATGIDNIRDVIPFPR 566 +LD +D++ + ++ I+ L V PF RITY E + + WG D + HE + KF +PV V +P +KAFYM+ + + VA D+L P+ GE+IGGSQR D+++ RI GL LE Y+WYLDLRR+GTV HSGFG+G ER++ + TG +IR+ IPFPR Sbjct: 254 VLDRRREDLKVLERD-----ISLLEQVVP-PFPRITYDQAIELIAAHQGEVEG-AYPLPWGEDFGAPHETLIAS-KFDRPVFVERFPSAVKAFYMQPDPNRPEVALCADLLAPEGYGEIIGGSQRIHDPDLLEQRIRAHGLRLEDYQWYLDLRRYGTVPHSGFGMGIERVVAWITGTRHIRETIPFPR 433
BLAST of FC929270 vs. ExPASy Swiss-Prot
Match: SYN_OCEIH (Asparaginyl-tRNA synthetase OS=Oceanobacillus iheyensis GN=asnS PE=3 SV=1) HSP 1 Score: 128.642 bits (322), Expect = 4.031e-29 Identity = 70/184 (38.04%), Postives = 110/184 (59.78%), Query Frame = 3 Query: 33 MEFMAKNYDKSCINRLRMVASTPFERITYTXXXXXXXXXXKEGKHFENKVEWGIDLASEHERYLTEVKFQKPVIVYNYPKGIKAFYMRLNDDLKTVA-AMDVLVPK-VGELIGGSQREERYDVIKSRIEDMGLPLEPYEWYLDLRRFGTVKHSGFGLGFERMILFATGIDNIRDVIPFPRYPGR 578 +E + D S + +++ PF RI+Y + K F++ +EWG D + HE + E + PV + NYPK IKAFYM+ + D V D++ P+ GE+IGGSQR + ++++ R E+ GL Y+WYL+LR++G+V HSGFGLG ER + + +G++++R+ IPFPR R Sbjct: 255 LELSVLDRDLSKLEKIK----APFPRISYDEAIDML-----KEKGFDD-IEWGEDFGAPHETAIAE-SYDMPVFITNYPKDIKAFYMKPHPDRSDVVLCADLIAPEGYGEIIGGSQRIDDLELMEQRYEEHGLTGPAYQWYLELRKYGSVPHSGFGLGLERTVAWLSGVEHVRETIPFPRLLNR 427
BLAST of FC929270 vs. ExPASy Swiss-Prot
Match: SYN_STRTD (Asparaginyl-tRNA synthetase OS=Streptococcus thermophilus (strain ATCC BAA-491 / LMD-9) GN=asnS PE=3 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 5.264e-29 Identity = 65/168 (38.69%), Postives = 100/168 (59.52%), Query Frame = 3 Query: 69 INRLRMVASTPFERITYTXXXXXXXXXXKEGKHFENKVEWGIDLASEHERYLTEVKFQKPVIVYNYPKGIKAFYMR-LNDDLKTVAAMDVLVPK-VGELIGGSQREERYDVIKSRIEDMGLPLEPYEWYLDLRRFGTVKHSGFGLGFERMILFATGIDNIRDVIPFPR 566 ++ L+ + PF+R++Y K+ +E G D S HE +++ F P V NYP KAFYM+ + + + V D+L P+ GE+IGGS RE+ YD + +++E++G+ YE+YLDLR++G+V H GFG+G ERM+ F G +IR+ IPFPR Sbjct: 275 VDLLKKYIAEPFKRVSYDEAIDLLQAHEKDEDTDYEHLEHGDDFGSPHETWISNY-FGVPTFVVNYPASFKAFYMKPVPGNPERVLCADLLAPEGYGEIIGGSMREDDYDALVAKMEELGMDRSEYEFYLDLRKYGSVPHGGFGIGIERMVTFVAGTKHIREAIPFPR 441
BLAST of FC929270 vs. ExPASy Swiss-Prot
Match: SYN_STRT2 (Asparaginyl-tRNA synthetase OS=Streptococcus thermophilus (strain ATCC BAA-250 / LMG 18311) GN=asnS PE=3 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 2.000e-28 Identity = 64/168 (38.10%), Postives = 99/168 (58.93%), Query Frame = 3 Query: 69 INRLRMVASTPFERITYTXXXXXXXXXXKEGKHFENKVEWGIDLASEHERYLTEVKFQKPVIVYNYPKGIKAFYMR-LNDDLKTVAAMDVLVPK-VGELIGGSQREERYDVIKSRIEDMGLPLEPYEWYLDLRRFGTVKHSGFGLGFERMILFATGIDNIRDVIPFPR 566 ++ L+ + PF+R++Y + +E G D S HE +++ F P V NYP KAFYM+ + + + V D+L P+ GE+IGGS RE+ YD + +++E++G+ YE+YLDLR++G+V H GFG+G ERM+ F G +IR+ IPFPR Sbjct: 275 VDLLKKYIAEPFKRVSYDEAIDLLQAHENDEDTDYEHLEHGDDFGSPHETWISNY-FGVPTFVVNYPASFKAFYMKPVPGNPERVLCADLLAPEGYGEIIGGSMREDDYDALVAKMEELGMDRSEYEFYLDLRKYGSVPHGGFGIGIERMVTFVAGTKHIREAIPFPR 441 The following BLAST results are available for this feature:
BLAST of FC929270 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 320
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC929270 ID=FC929270; Name=FC929270; organism=Citrus clementina; type=EST; length=822bpback to top |