FC929270
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC929270 vs. ExPASy Swiss-Prot
Match: SYN_THET8 (Asparaginyl-tRNA synthetase OS=Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) GN=asnS PE=1 SV=2) HSP 1 Score: 123.25 bits (308), Expect = 1.693e-27 Identity = 68/165 (41.21%), Postives = 98/165 (59.39%), Query Frame = 3 Query: 78 LRMVASTPFERITYTXXXXXXXXXXKEGKHFENKVEWGIDLASEHERYLTEVKFQKPVIVYNYPKGIKAFYMRLN-DDLKTVAAMDVLVPK-VGELIGGSQREERYDVIKSRIEDMGLPLEPYEWYLDLRRFGTVKHSGFGLGFERMILFATGIDNIRDVIPFPR 566 L A + R+TY +E + +G D + HE L+ +F +PV V YP IKAFYM + +D + V D+L P+ GE+IGGSQR ++++ +I++ GLP E Y+WYLDLRRFG+V HSGFGLG ER + + G+ ++R+ IPFPR Sbjct: 269 LEPAAEGHYPRLTYKEAVALVNRIAQEDPEVP-PLPYGEDFGAPHEAALSR-RFDRPVFVERYPARIKAFYMEPDPEDPELVLNDDLLAPEGYGEIIGGSQRIHDLELLRRKIQEFGLPEEVYDWYLDLRRFGSVPHSGFGLGLERTVAWICGLAHVREAIPFPR 431
BLAST of FC929270 vs. ExPASy Swiss-Prot
Match: SYN_THET2 (Asparaginyl-tRNA synthetase OS=Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) GN=asnS PE=3 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 1.693e-27 Identity = 68/165 (41.21%), Postives = 98/165 (59.39%), Query Frame = 3 Query: 78 LRMVASTPFERITYTXXXXXXXXXXKEGKHFENKVEWGIDLASEHERYLTEVKFQKPVIVYNYPKGIKAFYMRLN-DDLKTVAAMDVLVPK-VGELIGGSQREERYDVIKSRIEDMGLPLEPYEWYLDLRRFGTVKHSGFGLGFERMILFATGIDNIRDVIPFPR 566 L A + R+TY +E + +G D + HE L+ +F +PV V YP IKAFYM + +D + V D+L P+ GE+IGGSQR ++++ +I++ GLP E Y+WYLDLRRFG+V HSGFGLG ER + + G+ ++R+ IPFPR Sbjct: 269 LEPAAEGHYARLTYKEAVALVNRIAQEDPEVP-PLPYGEDFGAPHEAALSR-RFDRPVFVERYPARIKAFYMEPDPEDPELVLNDDLLAPEGYGEIIGGSQRIHDLELLRRKIQEFGLPEEVYDWYLDLRRFGSVPHSGFGLGLERTVAWICGLAHVREAIPFPR 431
BLAST of FC929270 vs. ExPASy Swiss-Prot
Match: SYNM_YEAST (Asparaginyl-tRNA synthetase, mitochondrial OS=Saccharomyces cerevisiae GN=SLM5 PE=1 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 2.212e-27 Identity = 67/159 (42.14%), Postives = 92/159 (57.86%), Query Frame = 3 Query: 102 FERITYTXXXXXXXXXXKEGKHFENKVEWGIDLASEHERYLTEVKFQKPVIVYNYPKGIKAFYMRLN---DDLKTVAAMDVLVPKVGELIGGSQREERYDVIKSRIEDMGLPLE-PYEWYLDLRRFGTVKHSGFGLGFERMILFATGIDNIRDVIPFPR 566 + ITYT E HF+ + +WG L +EHE++L F+ PV V +YP+ K FYM+ N DD TV D+LVP +GE+IGGS RE+ YD + ++ G+ +WY+ LR+ G+ H GFGLGFER I + G NI+D IPF R Sbjct: 328 WHNITYTNAIEILKKRHNEVSHFKYEPKWGQPLQTEHEKFLAGEYFKSPVFVTDYPRLCKPFYMKQNSTPDD--TVGCFDLLVPGMGEIIGGSLREDDYDKLCREMKARGMNRSGELDWYVSLRKEGSAPHGGFGLGFERFISYLYGNHNIKDAIPFYR 484
BLAST of FC929270 vs. ExPASy Swiss-Prot
Match: SYN_THEVO (Asparaginyl-tRNA synthetase OS=Thermoplasma volcanium GN=asnS PE=3 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 4.927e-27 Identity = 68/188 (36.17%), Postives = 110/188 (58.51%), Query Frame = 3 Query: 9 LLDHCFDDMEFMAKNYDKSCINRLRMVASTPFERITYTXXXXXXXXXXKEGKHFENKVEWGIDLASEHERYLTEVKFQKPVIVYNYPKGIKAFYMRLN-DDLKTVAAMDVLVPK-VGELIGGSQREERYDVIKSRIEDMGLPLEPYEWYLDLRRFGTVKHSGFGLGFERMILFATGIDNIRDVIPFPR 566 +++ +DD++ + + D + ++ PF R+ Y+ K ++++G DL ++ ER +T +++ KPV V NYPK +K FYM + D+ V D+L P+ GE+IGGSQR Y + RI + GL Y WY+DLR++G+V HSGFGLG +R+ ++ +DNIR+ IP+PR Sbjct: 249 VIEENYDDLKLLGR--DPEALRAMK----PPFPRVKYSDII-------KVANEIGMQLKYGDDLGADEERQIT-MRYCKPVFVTNYPKELKPFYMPQDPDNPSEVLNHDLLAPEGYGEIIGGSQRIWDYKELMQRIREAGLDESAYYWYIDLRKYGSVPHSGFGLGMDRLAMWIMHLDNIREAIPYPR 422
BLAST of FC929270 vs. ExPASy Swiss-Prot
Match: SYN_STRMU (Asparaginyl-tRNA synthetase OS=Streptococcus mutans GN=asnS PE=3 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 4.927e-27 Identity = 65/165 (39.39%), Postives = 97/165 (58.79%), Query Frame = 3 Query: 78 LRMVASTPFERITYTXXXXXXXXXXKEGKHFENKVEWGIDLASEHERYLTEVKFQKPVIVYNYPKGIKAFYMR-LNDDLKTVAAMDVLVPK-VGELIGGSQREERYDVIKSRIEDMGLPLEPYEWYLDLRRFGTVKHSGFGLGFERMILFATGIDNIRDVIPFPR 566 LR + PF+R++Y ++ +E G D S HE +++ F P V NYP +KAFYM+ + + V D+L P+ GE+IGGS+RE Y+ + ++I++ GL + Y +YLDLR++G+V H GFGLG ERM+ F G +IR+ IPFPR Sbjct: 278 LRKYIAQPFKRVSYDDAITLLQEHEEDEDTDYEHIEHGDDFGSPHETWISNY-FGIPTFVVNYPASLKAFYMKPVPGNPDRVLCADLLAPEGYGEIIGGSERETDYNTLLAKIKENGLNPDDYAFYLDLRQYGSVPHCGFGLGLERMVTFVAGTKHIREAIPFPR 441
BLAST of FC929270 vs. ExPASy Swiss-Prot
Match: SYNM_SCHPO (Asparaginyl-tRNA synthetase, mitochondrial OS=Schizosaccharomyces pombe GN=slm5 PE=2 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 4.927e-27 Identity = 71/179 (39.66%), Postives = 105/179 (58.66%), Query Frame = 3 Query: 42 MAKNYDKSCINRLRMVASTPFERITYTXXXXXXXXXXKEGKHFENKVEWGIDLASEHERYLTEVKFQKPVIVYNYPKGIKAFYMRLNDDLKTVAAMDVLVPKVGELIGGSQREERYDVIKSRIEDMGLPLEPYEWYLDLRRFGTVKHSGFGLGFERMILFATGID-NIRDVIPFPRYPG 575 M +NY + ++L P++ +TY+ K K+ +WG DL+SEHE+YL E+ + PV V +YP+ IK FYM+ + TVAA+D+LVP+VGEL GGS R++ D K+ ++ +WYLDL ++ H GFGLG ER+I F G + N+++ IPFPR G Sbjct: 274 MEQNYHRDHWDQLLK----PWKCMTYSEAIEELSAVKKTWKY---PPKWGNDLSSEHEKYLCEILHKTPVFVTDYPQKIKPFYMK-SSGPDTVAAVDLLVPQVGELAGGSLRKDHLDEYKTYPPEL-------QWYLDLMKYSNAPHGGFGLGIERLIAFLEGENTNVKETIPFPRSVG 437
BLAST of FC929270 vs. ExPASy Swiss-Prot
Match: SYN_ROSCS (Asparaginyl-tRNA synthetase OS=Roseiflexus castenholzii (strain DSM 13941 / HLO8) GN=asnS PE=3 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 1.098e-26 Identity = 67/158 (42.41%), Postives = 92/158 (58.23%), Query Frame = 3 Query: 99 PFERITYTXXXXXXXXXXKEGKHFENKVEWGIDLASEHERYLTEVKFQKPVIVYNYPKGIKAFYMRLNDDLKTVA-AMDVLVPK-VGELIGGSQREERYDVIKSRIEDMGLPLEPYEWYLDLRRFGTVKHSGFGLGFERMILFATGIDNIRDVIPFPR 566 PF RITY E + +EWG DL + HE + + F +PV V +P IKAFYM + + VA D+L P+ GE+IGGSQR +++ RI + GL ++ Y WY+DLRR+G+V HSGFG+G ER + G +IR+ IPFPR Sbjct: 278 PFPRITYDEALRLIAERYAEVEGC-TPLEWGEDLGAPHETLIASM-FDRPVFVERFPSAIKAFYMEPDPNRPEVALCADLLAPEGYGEIIGGSQRIHDAALLERRIREYGLNVDDYRWYIDLRRYGSVPHSGFGMGIERATAWIGGTHHIRETIPFPR 433
BLAST of FC929270 vs. ExPASy Swiss-Prot
Match: SYN_BACSU (Asparaginyl-tRNA synthetase OS=Bacillus subtilis GN=asnS PE=3 SV=2) HSP 1 Score: 120.553 bits (301), Expect = 1.098e-26 Identity = 63/162 (38.89%), Postives = 98/162 (60.49%), Query Frame = 3 Query: 99 PFERITYTXXXXXXXXXXKEGKHFENKVEWGIDLASEHERYLTEVKFQKPVIVYNYPKGIKAFYMRLNDDLKTVA-AMDVLVPK-VGELIGGSQREERYDVIKSRIEDMGLPLEPYEWYLDLRRFGTVKHSGFGLGFERMILFATGIDNIRDVIPFPRYPGR 578 PF RITY + K F++ +EWG D + HE + E + KPV + YP +K FYM+ D + V D++ P+ GE+IGGS+R ++++SR+++ GL + Y+WY +LR++G+V HSGFGLG ER + + +G ++R+ IPFPR R Sbjct: 273 PFPRITYDEAIEFL-----KEKGFDD-IEWGDDFGAPHETAIAE-HYDKPVFITRYPTSLKPFYMQPASDREDVVLCADLIAPEGYGEIIGGSERIHDMELLESRLKEHGLDSDAYKWYAELRKYGSVPHSGFGLGLERTVAWISGAPHVRETIPFPRLLNR 427
BLAST of FC929270 vs. ExPASy Swiss-Prot
Match: SYN_ROSS1 (Asparaginyl-tRNA synthetase OS=Roseiflexus sp. (strain RS-1) GN=asnS PE=3 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 1.434e-26 Identity = 66/158 (41.77%), Postives = 92/158 (58.23%), Query Frame = 3 Query: 99 PFERITYTXXXXXXXXXXKEGKHFENKVEWGIDLASEHERYLTEVKFQKPVIVYNYPKGIKAFYMRLNDDLKTVA-AMDVLVPK-VGELIGGSQREERYDVIKSRIEDMGLPLEPYEWYLDLRRFGTVKHSGFGLGFERMILFATGIDNIRDVIPFPR 566 PF RITY + + +EWG DL + HE + + F +PV V +P IKAFYM + VA D+L P+ GE+IGGSQR +++ RI + GL ++ Y+WY+DLRR+G+V HSGFG+G ER + G +IR+ IPFPR Sbjct: 278 PFPRITYDEALKLIAERHADVEGC-TPLEWGEDLGAPHETLIASL-FDRPVFVERFPSAIKAFYMEPDPQRPEVALCADLLAPEGYGEIIGGSQRIHDPALLERRIREYGLNVDDYQWYIDLRRYGSVPHSGFGMGIERATAWIAGTHHIRETIPFPR 433
BLAST of FC929270 vs. ExPASy Swiss-Prot
Match: SYN_BACLD (Asparaginyl-tRNA synthetase OS=Bacillus licheniformis (strain DSM 13 / ATCC 14580) GN=asnS PE=3 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 1.872e-26 Identity = 66/192 (34.38%), Postives = 113/192 (58.85%), Query Frame = 3 Query: 9 LLDHCFDDMEFMAKNYDKSCINRLRMVASTPFERITYTXXXXXXXXXXKEGKHFENKVEWGIDLASEHERYLTEVKFQKPVIVYNYPKGIKAFYMRLNDDLKTVA-AMDVLVPK-VGELIGGSQREERYDVIKSRIEDMGLPLEPYEWYLDLRRFGTVKHSGFGLGFERMILFATGIDNIRDVIPFPRYPGR 578 +L++C ++ + ++ K L ++ + PF RITY + K F++ +EWG D + HE + E + KPV + +YP +K FYM+ D + V D++ P+ GE+IGGS+R +++++R+++ GL + Y+WY +LR++G+V HSGFGLG ER + + G ++R+ IPFPR R Sbjct: 249 VLENCKIELNTLGRDTSK-----LELIKA-PFPRITYDEAIQFL-----KEKGFDD-IEWGDDFGAPHETAIAE-SYDKPVFITHYPTSLKPFYMQPAPDREDVVLCADLIAPEGYGEIIGGSERIHDLELLEARLKEHGLESDAYQWYAELRKYGSVPHSGFGLGLERTVAWICGSPHVRETIPFPRLLNR 427 The following BLAST results are available for this feature:
BLAST of FC929270 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 320
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Sequences
The
following sequences are available for this feature:
EST sequence >FC929270 ID=FC929270; Name=FC929270; organism=Citrus clementina; type=EST; length=822bpback to top |