FC929270
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC929270 vs. ExPASy Swiss-Prot
Match: SYN_YERPE (Asparaginyl-tRNA synthetase OS=Yersinia pestis GN=asnS PE=3 SV=1) HSP 1 Score: 227.254 bits (578), Expect = 8.327e-59 Identity = 110/191 (57.59%), Postives = 138/191 (72.25%), Query Frame = 3 Query: 9 LLDHCFDDMEFMAKNYDKSCINRLRMVASTPFERITYTXXXXXXXXXXKEGKHFENKVEWGIDLASEHERYLTEVKFQKPVIVYNYPKGIKAFYMRLNDDLKTVAAMDVLVPKVGELIGGSQREERYDVIKSRIEDMGLPLEPYEWYLDLRRFGTVKHSGFGLGFERMILFATGIDNIRDVIPFPRYPGRA 581 +L+ DDM+F A+ DK ++RL+ ++ F ++ YT G+ FEN V WGIDL+SEHERYL E F+ PV+V NYPK IKAFYMR+N+D KTVAAMDVL P +GE+IGGSQREER DV+ +R+ +MGL E Y WY DLRR+GTV HSGFGLGFER+I + TG+ N+RDVIPFPR P A Sbjct: 277 VLNERADDMKFFAERVDKDAVDRLQRFVTSDFAQVDYTDAIEILLA---SGQKFENDVSWGIDLSSEHERYLAEKHFKAPVVVKNYPKDIKAFYMRMNEDGKTVAAMDVLAPGIGEIIGGSQREERLDVLDARLAEMGLNKEDYWWYRDLRRYGTVPHSGFGLGFERLISYVTGVQNVRDVIPFPRTPRNA 464
BLAST of FC929270 vs. ExPASy Swiss-Prot
Match: SYN_YERPA (Asparaginyl-tRNA synthetase OS=Yersinia pestis bv. Antiqua (strain Antiqua) GN=asnS PE=3 SV=1) HSP 1 Score: 227.254 bits (578), Expect = 8.327e-59 Identity = 110/191 (57.59%), Postives = 138/191 (72.25%), Query Frame = 3 Query: 9 LLDHCFDDMEFMAKNYDKSCINRLRMVASTPFERITYTXXXXXXXXXXKEGKHFENKVEWGIDLASEHERYLTEVKFQKPVIVYNYPKGIKAFYMRLNDDLKTVAAMDVLVPKVGELIGGSQREERYDVIKSRIEDMGLPLEPYEWYLDLRRFGTVKHSGFGLGFERMILFATGIDNIRDVIPFPRYPGRA 581 +L+ DDM+F A+ DK ++RL+ ++ F ++ YT G+ FEN V WGIDL+SEHERYL E F+ PV+V NYPK IKAFYMR+N+D KTVAAMDVL P +GE+IGGSQREER DV+ +R+ +MGL E Y WY DLRR+GTV HSGFGLGFER+I + TG+ N+RDVIPFPR P A Sbjct: 277 VLNERADDMKFFAERVDKDAVDRLQRFVTSDFAQVDYTDAIEILLA---SGQKFENDVSWGIDLSSEHERYLAEKHFKAPVVVKNYPKDIKAFYMRMNEDGKTVAAMDVLAPGIGEIIGGSQREERLDVLDARLAEMGLNKEDYWWYRDLRRYGTVPHSGFGLGFERLISYVTGVQNVRDVIPFPRTPRNA 464
BLAST of FC929270 vs. ExPASy Swiss-Prot
Match: SYN_YERP3 (Asparaginyl-tRNA synthetase OS=Yersinia pseudotuberculosis serotype O:1b (strain IP 31758) GN=asnS PE=3 SV=1) HSP 1 Score: 227.254 bits (578), Expect = 8.327e-59 Identity = 110/191 (57.59%), Postives = 138/191 (72.25%), Query Frame = 3 Query: 9 LLDHCFDDMEFMAKNYDKSCINRLRMVASTPFERITYTXXXXXXXXXXKEGKHFENKVEWGIDLASEHERYLTEVKFQKPVIVYNYPKGIKAFYMRLNDDLKTVAAMDVLVPKVGELIGGSQREERYDVIKSRIEDMGLPLEPYEWYLDLRRFGTVKHSGFGLGFERMILFATGIDNIRDVIPFPRYPGRA 581 +L+ DDM+F A+ DK ++RL+ ++ F ++ YT G+ FEN V WGIDL+SEHERYL E F+ PV+V NYPK IKAFYMR+N+D KTVAAMDVL P +GE+IGGSQREER DV+ +R+ +MGL E Y WY DLRR+GTV HSGFGLGFER+I + TG+ N+RDVIPFPR P A Sbjct: 277 VLNERADDMKFFAERVDKDAVDRLQRFVTSDFAQVDYTDAIEILLA---SGQKFENDVSWGIDLSSEHERYLAEKHFKAPVVVKNYPKDIKAFYMRMNEDGKTVAAMDVLAPGIGEIIGGSQREERLDVLDARLAEMGLNKEDYWWYRDLRRYGTVPHSGFGLGFERLISYVTGVQNVRDVIPFPRTPRNA 464
BLAST of FC929270 vs. ExPASy Swiss-Prot
Match: SYN_YERE8 (Asparaginyl-tRNA synthetase OS=Yersinia enterocolitica serotype O:8 / biotype 1B (strain 8081) GN=asnS PE=3 SV=1) HSP 1 Score: 227.254 bits (578), Expect = 8.327e-59 Identity = 110/191 (57.59%), Postives = 138/191 (72.25%), Query Frame = 3 Query: 9 LLDHCFDDMEFMAKNYDKSCINRLRMVASTPFERITYTXXXXXXXXXXKEGKHFENKVEWGIDLASEHERYLTEVKFQKPVIVYNYPKGIKAFYMRLNDDLKTVAAMDVLVPKVGELIGGSQREERYDVIKSRIEDMGLPLEPYEWYLDLRRFGTVKHSGFGLGFERMILFATGIDNIRDVIPFPRYPGRA 581 +L+ DDM+F A+ DK ++RL+ ++ F ++ YT G+ FEN V WGIDL+SEHERYL E F+ PV+V NYPK IKAFYMR+N+D KTVAAMDVL P +GE+IGGSQREER DV+ +R+ +MGL E Y WY DLRR+GTV HSGFGLGFER+I + TG+ N+RDVIPFPR P A Sbjct: 277 VLNERADDMKFFAERVDKDAVDRLQRFVTSDFAQVDYTDAIEILLA---SGQKFENDVSWGIDLSSEHERYLAEQHFKAPVVVKNYPKDIKAFYMRMNEDGKTVAAMDVLAPGIGEIIGGSQREERLDVLDARLAEMGLNKEDYWWYRDLRRYGTVPHSGFGLGFERLISYVTGVQNVRDVIPFPRTPRNA 464
BLAST of FC929270 vs. ExPASy Swiss-Prot
Match: SYN_BACV8 (Asparaginyl-tRNA synthetase OS=Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154) GN=asnS PE=3 SV=1) HSP 1 Score: 226.868 bits (577), Expect = 1.088e-58 Identity = 106/193 (54.92%), Postives = 139/193 (72.02%), Query Frame = 3 Query: 6 WLLDHCFDDMEFMAKNYDKSCINRLRMVASTPFERITYTXXXXXXXXXXKEGKHFENKVEWGIDLASEHERYLTEVKFQKPVIVYNYPKGIKAFYMRLNDDLKTVAAMDVLVPKVGELIGGSQREERYDVIKSRIEDMGLPLEPYEWYLDLRRFGTVKHSGFGLGFERMILFATGIDNIRDVIPFPRYPGRAD 584 W LD+C+DD++F+ +DK I RL+ V F R+ YT +G FE V WG+DLASEHERYL E F++PVI+ +YPK IKAFYM+ N+D KTV AMDVL PK+GE+IGGS+RE YD + +RI+++G+P++ WYLD R+FG+ HSGFGLGFER++LF TG+ NIRDVIPFPR P A+ Sbjct: 274 WALDNCYDDVKFLNDMFDKGLIERLQGVLKEEFVRLPYTEGIKILEEAVVKGHKFEFPVYWGVDLASEHERYLVEEHFKRPVILTDYPKEIKAFYMKQNEDGKTVRAMDVLFPKIGEIIGGSEREADYDKLMTRIQELGIPMKDMWWYLDTRKFGSCPHSGFGLGFERLLLFVTGMTNIRDVIPFPRTPRNAE 466
BLAST of FC929270 vs. ExPASy Swiss-Prot
Match: SYN_SHEAM (Asparaginyl-tRNA synthetase OS=Shewanella amazonensis (strain ATCC BAA-1098 / SB2B) GN=asnS PE=3 SV=1) HSP 1 Score: 226.483 bits (576), Expect = 1.420e-58 Identity = 115/200 (57.50%), Postives = 140/200 (70.00%), Query Frame = 3 Query: 9 LLDHCF--------DDMEFMAKNYDKSCINRLRMVASTPFERITYTXXXXXXXXXXKEGKHFENKVEWGIDLASEHERYLTEVKFQKPVIVYNYPKGIKAFYMRLNDDLKTVAAMDVLVPKVGELIGGSQREERYDVIKSRIEDMGLPLEPYEWYLDLRRFGTVKHSGFGLGFERMILFATGIDNIRDVIPFPRYPGRAD 584 +L +CF DDM+F A+ D S I+RL+ S+ F ++ YT GK FE VEWGIDL SEHERYL E F+ PV+V NYPK IKAFYMRLN+D KTVAAMDVL P +GE+IGGSQREER DV+ +R+E+M L E Y WY DLRR+GTV H+GFGLGFER++ + TG+ NIRDVIPFPR P A+ Sbjct: 269 MLKYCFNAVLQERMDDMKFFAERVDGSVIDRLQSFVSSDFAQVDYTDAVEILQNC---GKTFEYPVEWGIDLQSEHERYLAEEHFKAPVVVKNYPKDIKAFYMRLNEDGKTVAAMDVLAPGIGEIIGGSQREERLDVLDARLEEMNLSKEDYWWYRDLRRYGTVPHAGFGLGFERLVSYVTGVGNIRDVIPFPRAPRSAN 465
BLAST of FC929270 vs. ExPASy Swiss-Prot
Match: SYN_PARD8 (Asparaginyl-tRNA synthetase OS=Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC 11152) GN=asnS PE=3 SV=1) HSP 1 Score: 226.483 bits (576), Expect = 1.420e-58 Identity = 107/193 (55.44%), Postives = 138/193 (71.50%), Query Frame = 3 Query: 6 WLLDHCFDDMEFMAKNYDKSCINRLRMVASTPFERITYTXXXXXXXXXXKEGKHFENKVEWGIDLASEHERYLTEVKFQKPVIVYNYPKGIKAFYMRLNDDLKTVAAMDVLVPKVGELIGGSQREERYDVIKSRIEDMGLPLEPYEWYLDLRRFGTVKHSGFGLGFERMILFATGIDNIRDVIPFPRYPGRAD 584 W LD+C +D++F+ +DK I RL V F R+ YT +G FE V WG+DLASEHER+L E F++PVI+ +YPK IKAFYM+ N+D KTV AMDVL PK+GE+IGGS+RE YD + +RI+++G+P++ WYLD RRFGTV HSGFGLGFER++LF TG+ NIRDVIPFPR P A+ Sbjct: 275 WALDNCMEDIKFLNDMFDKELIARLEGVLKDSFVRLPYTEGIKILEEAVAKGHKFEFPVYWGVDLASEHERFLVEDHFKRPVILTDYPKEIKAFYMKQNEDGKTVRAMDVLFPKIGEIIGGSEREADYDKLMTRIDELGIPMKDMWWYLDTRRFGTVPHSGFGLGFERLLLFVTGMANIRDVIPFPRTPNNAE 467
BLAST of FC929270 vs. ExPASy Swiss-Prot
Match: SYN_SHEON (Asparaginyl-tRNA synthetase OS=Shewanella oneidensis GN=asnS PE=3 SV=1) HSP 1 Score: 226.098 bits (575), Expect = 1.855e-58 Identity = 111/192 (57.81%), Postives = 138/192 (71.88%), Query Frame = 3 Query: 9 LLDHCFDDMEFMAKNYDKSCINRLRMVASTPFERITYTXXXXXXXXXXKEGKHFENKVEWGIDLASEHERYLTEVKFQKPVIVYNYPKGIKAFYMRLNDDLKTVAAMDVLVPKVGELIGGSQREERYDVIKSRIEDMGLPLEPYEWYLDLRRFGTVKHSGFGLGFERMILFATGIDNIRDVIPFPRYPGRAD 584 +L DD++F A++ DK+ I RL+ S+ F ++ YT K G+ FE V WGIDL+SEHERYL E F+ PV+V NYPK IKAFYMRLN+D KTVAAMDVL P +GE+IGGSQREER DV+ R+E+M L E Y WY DLRR+GTV H+GFGLGFER++ + TG+ NIRDVIPFPR P A+ Sbjct: 277 VLTERMDDLQFFAQHVDKTVIERLQSFVSSDFAQVDYTDAVEILQ---KSGREFEFPVSWGIDLSSEHERYLAEEHFKAPVVVKNYPKDIKAFYMRLNEDGKTVAAMDVLAPGIGEIIGGSQREERLDVLDMRLEEMDLNKEDYWWYRDLRRYGTVPHAGFGLGFERLVSYVTGVSNIRDVIPFPRAPRTAN 465
BLAST of FC929270 vs. ExPASy Swiss-Prot
Match: SYN_ERWCT (Asparaginyl-tRNA synthetase OS=Erwinia carotovora subsp. atroseptica GN=asnS PE=3 SV=1) HSP 1 Score: 226.098 bits (575), Expect = 1.855e-58 Identity = 110/191 (57.59%), Postives = 134/191 (70.16%), Query Frame = 3 Query: 9 LLDHCFDDMEFMAKNYDKSCINRLRMVASTPFERITYTXXXXXXXXXXKEGKHFENKVEWGIDLASEHERYLTEVKFQKPVIVYNYPKGIKAFYMRLNDDLKTVAAMDVLVPKVGELIGGSQREERYDVIKSRIEDMGLPLEPYEWYLDLRRFGTVKHSGFGLGFERMILFATGIDNIRDVIPFPRYPGRA 581 +L+ DDM F A+ DK + RL S+ F ++ YT G+ FEN V WG+DL+SEHERYL E F+ PV+V NYPK IKAFYMR+NDD KTVAAMDVL P +GE+IGGSQREER + SR+E+MGL E Y WY DLRR+GT+ HSGFGLGFER+I + TG+ N+RDVIPFPR P A Sbjct: 277 VLNERADDMAFFAERVDKEAVTRLEKFVSSDFAQVDYTDAVEILLNC---GQQFENPVYWGVDLSSEHERYLAEQHFKAPVVVKNYPKDIKAFYMRMNDDGKTVAAMDVLAPGIGEIIGGSQREERLAALDSRLEEMGLNKEDYWWYRDLRRYGTIPHSGFGLGFERLIAYVTGVQNVRDVIPFPRTPRNA 464
BLAST of FC929270 vs. ExPASy Swiss-Prot
Match: SYN_BACTN (Asparaginyl-tRNA synthetase OS=Bacteroides thetaiotaomicron GN=asnS PE=3 SV=1) HSP 1 Score: 226.098 bits (575), Expect = 1.855e-58 Identity = 108/193 (55.96%), Postives = 137/193 (70.98%), Query Frame = 3 Query: 6 WLLDHCFDDMEFMAKNYDKSCINRLRMVASTPFERITYTXXXXXXXXXXKEGKHFENKVEWGIDLASEHERYLTEVKFQKPVIVYNYPKGIKAFYMRLNDDLKTVAAMDVLVPKVGELIGGSQREERYDVIKSRIEDMGLPLEPYEWYLDLRRFGTVKHSGFGLGFERMILFATGIDNIRDVIPFPRYPGRAD 584 W LD+C DD++F+ +DK I RL+ V F R+ YT +G FE V WG+DLASEHERYL E F++PVI+ +YPK IKAFYM+ N+D KTV AMDVL PK+GE+IGGS+RE Y+ + +RIE+M +P++ WYLD R+FGT HSGFGLGFER++LF TG+ NIRDVIPFPR P AD Sbjct: 274 WALDNCADDVKFLNDMFDKGLIERLQGVLKDDFVRLPYTDGIKILEDAVAKGHKFEFPVYWGVDLASEHERYLVEEHFKRPVILTDYPKEIKAFYMKQNEDGKTVRAMDVLFPKIGEIIGGSEREADYNKLMTRIEEMHIPMKDMWWYLDTRKFGTCPHSGFGLGFERLLLFVTGMSNIRDVIPFPRTPRNAD 466 The following BLAST results are available for this feature:
BLAST of FC929270 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 320
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Sequences
The
following sequences are available for this feature:
EST sequence >FC929270 ID=FC929270; Name=FC929270; organism=Citrus clementina; type=EST; length=822bpback to top |