FC929270
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC929270 vs. ExPASy Swiss-Prot
Match: SYN_PHOLL (Asparaginyl-tRNA synthetase OS=Photorhabdus luminescens subsp. laumondii GN=asnS PE=3 SV=1) HSP 1 Score: 225.713 bits (574), Expect = 2.423e-58 Identity = 109/186 (58.60%), Postives = 134/186 (72.04%), Query Frame = 3 Query: 27 DDMEFMAKNYDKSCINRLRMVASTPFERITYTXXXXXXXXXXKEGKHFENKVEWGIDLASEHERYLTEVKFQKPVIVYNYPKGIKAFYMRLNDDLKTVAAMDVLVPKVGELIGGSQREERYDVIKSRIEDMGLPLEPYEWYLDLRRFGTVKHSGFGLGFERMILFATGIDNIRDVIPFPRYPGRAD 584 DD++F A+ DK I RL ++ F +I YT G+ FEN V WG+DL+SEHERYL E FQ PV+V NYPK IKAFYMR+NDD KTVAA+DVL P +GE+IGGSQREER D++ R+E+MGL E Y WY DLRR+GTV HSGFGLGFER++ + TG+ N+RDVIPFPR P A+ Sbjct: 283 DDLQFFAERVDKDVITRLEKFINSDFAQIDYTSAIEILQNC---GQKFENPVFWGVDLSSEHERYLAEKHFQAPVVVKNYPKDIKAFYMRMNDDGKTVAALDVLAPGIGEIIGGSQREERLDMLDKRLEEMGLNKEDYWWYRDLRRYGTVPHSGFGLGFERLVAYVTGVPNVRDVIPFPRTPRSAN 465
BLAST of FC929270 vs. ExPASy Swiss-Prot
Match: SYN_BACFN (Asparaginyl-tRNA synthetase OS=Bacteroides fragilis (strain ATCC 25285 / NCTC 9343) GN=asnS PE=3 SV=1) HSP 1 Score: 225.713 bits (574), Expect = 2.423e-58 Identity = 108/193 (55.96%), Postives = 136/193 (70.47%), Query Frame = 3 Query: 6 WLLDHCFDDMEFMAKNYDKSCINRLRMVASTPFERITYTXXXXXXXXXXKEGKHFENKVEWGIDLASEHERYLTEVKFQKPVIVYNYPKGIKAFYMRLNDDLKTVAAMDVLVPKVGELIGGSQREERYDVIKSRIEDMGLPLEPYEWYLDLRRFGTVKHSGFGLGFERMILFATGIDNIRDVIPFPRYPGRAD 584 W LD+C DD++F+ +DK I RL V F R+ YT +G FE V WG+DLASEHERYL E F++PVI+ +YPK IKAFYM+ N+D KTV AMDVL PK+GE+IGGS+RE Y+ + +RIE+M +P++ WYLD R+FGT HSGFGLGFER++LF TG+ NIRDVIPFPR P AD Sbjct: 274 WALDNCADDVKFLNDMFDKGLIERLEGVLKEDFVRLPYTEGIKILEEAVAKGHKFEFPVYWGVDLASEHERYLVEDHFKRPVILTDYPKEIKAFYMKQNEDGKTVRAMDVLFPKIGEIIGGSERESDYNKLMTRIEEMHIPMKDMWWYLDTRKFGTCPHSGFGLGFERLLLFVTGMSNIRDVIPFPRTPRNAD 466
BLAST of FC929270 vs. ExPASy Swiss-Prot
Match: SYN_SHESR (Asparaginyl-tRNA synthetase OS=Shewanella sp. (strain MR-7) GN=asnS PE=3 SV=1) HSP 1 Score: 225.328 bits (573), Expect = 3.164e-58 Identity = 112/194 (57.73%), Postives = 139/194 (71.65%), Query Frame = 3 Query: 3 DWLLDHCFDDMEFMAKNYDKSCINRLRMVASTPFERITYTXXXXXXXXXXKEGKHFENKVEWGIDLASEHERYLTEVKFQKPVIVYNYPKGIKAFYMRLNDDLKTVAAMDVLVPKVGELIGGSQREERYDVIKSRIEDMGLPLEPYEWYLDLRRFGTVKHSGFGLGFERMILFATGIDNIRDVIPFPRYPGRAD 584 D +L DD++F A++ DK+ I RL+ S+ F ++ YT K G+ FE V WGIDL+SEHERYL E F+ PV+V NYPK IKAFYMRLN+D KTVAAMDVL P +GE+IGGSQREER DV+ R+E+M L E Y WY DLRR+GTV H+GFGLGFER++ + TG+ NIRDVIPFPR P A+ Sbjct: 275 DAVLAERMDDLQFFAQHVDKTVIERLQSFVSSDFAQVDYTDAVEILQ---KCGREFEFPVSWGIDLSSEHERYLAEEHFKAPVVVKNYPKDIKAFYMRLNEDGKTVAAMDVLAPGIGEIIGGSQREERLDVLDMRLEEMDLNKEDYWWYRDLRRYGTVPHAGFGLGFERLVSYVTGVSNIRDVIPFPRAPRTAN 465
BLAST of FC929270 vs. ExPASy Swiss-Prot
Match: SYN_SHESA (Asparaginyl-tRNA synthetase OS=Shewanella sp. (strain ANA-3) GN=asnS PE=3 SV=1) HSP 1 Score: 225.328 bits (573), Expect = 3.164e-58 Identity = 111/186 (59.68%), Postives = 136/186 (73.12%), Query Frame = 3 Query: 27 DDMEFMAKNYDKSCINRLRMVASTPFERITYTXXXXXXXXXXKEGKHFENKVEWGIDLASEHERYLTEVKFQKPVIVYNYPKGIKAFYMRLNDDLKTVAAMDVLVPKVGELIGGSQREERYDVIKSRIEDMGLPLEPYEWYLDLRRFGTVKHSGFGLGFERMILFATGIDNIRDVIPFPRYPGRAD 584 DD++F A++ DK+ I RL+ S+ F ++ YT K G+ FE V WGIDL+SEHERYL E F+ PV+V NYPK IKAFYMRLN+D KTVAAMDVL P +GE+IGGSQREER DV+ R+E+M L E Y WY DLRR+GTV HSGFGLGFER++ + TG+ NIRDVIPFPR P A+ Sbjct: 283 DDLQFFAQHVDKTVIERLQSFVSSDFAQVDYTDAVDILQ---KCGREFEFPVSWGIDLSSEHERYLAEEHFKAPVVVKNYPKDIKAFYMRLNEDGKTVAAMDVLAPGIGEIIGGSQREERLDVLDMRLEEMDLNKEDYWWYRDLRRYGTVPHSGFGLGFERLVSYVTGVSNIRDVIPFPRAPRTAN 465
BLAST of FC929270 vs. ExPASy Swiss-Prot
Match: SYN_BACFR (Asparaginyl-tRNA synthetase OS=Bacteroides fragilis GN=asnS PE=3 SV=1) HSP 1 Score: 224.942 bits (572), Expect = 4.133e-58 Identity = 108/193 (55.96%), Postives = 135/193 (69.95%), Query Frame = 3 Query: 6 WLLDHCFDDMEFMAKNYDKSCINRLRMVASTPFERITYTXXXXXXXXXXKEGKHFENKVEWGIDLASEHERYLTEVKFQKPVIVYNYPKGIKAFYMRLNDDLKTVAAMDVLVPKVGELIGGSQREERYDVIKSRIEDMGLPLEPYEWYLDLRRFGTVKHSGFGLGFERMILFATGIDNIRDVIPFPRYPGRAD 584 W LD+C DD++F+ +DK I RL V F R+ YT +G FE V WG+DLASEHERYL E F++PVI+ +YPK IKAFYM+ N+D KTV AMDVL PK+GE+IGGS+RE Y+ + RIE+M +P++ WYLD R+FGT HSGFGLGFER++LF TG+ NIRDVIPFPR P AD Sbjct: 274 WALDNCADDVKFLNDMFDKGLIERLEGVLKEDFVRLPYTEGIKILEEAVAKGHKFEFPVYWGVDLASEHERYLVEDHFKRPVILTDYPKEIKAFYMKQNEDGKTVRAMDVLFPKIGEIIGGSERESDYNKLMMRIEEMHIPMKDMWWYLDTRKFGTCPHSGFGLGFERLLLFVTGMSNIRDVIPFPRTPRNAD 466
BLAST of FC929270 vs. ExPASy Swiss-Prot
Match: SYN_SOLUE (Asparaginyl-tRNA synthetase OS=Solibacter usitatus (strain Ellin6076) GN=asnS PE=3 SV=1) HSP 1 Score: 224.557 bits (571), Expect = 5.398e-58 Identity = 113/197 (57.36%), Postives = 142/197 (72.08%), Query Frame = 3 Query: 3 DWLLDHCFDDMEFMAKNYDKSCINRLRMVASTPFERITYTXXXXXXXXXXKEGKHFENKVEWGIDLASEHERYLTEVKFQKPVIVYNYPKGIKAFYMRLNDDLKTVAAMDVLVPKVGELIGGSQREERYDVIKSRIEDM---GLPLEPYEWYLDLRRFGTVKHSGFGLGFERMILFATGIDNIRDVIPFPRYPGRAD 584 +++++ C D++F+AK YD L + + FERITYT + G+ FE +WG D+ SEHERYLTE F KPVIV +YPK IKAFYMR NDD KTVAAMDVL P++GE+IGGSQREER+DV+ RI +M GL E Y WYLDLRRFG V+H+GFG+GFERM+++ TG+ NIRDVIPFPR PG A+ Sbjct: 267 EYVVNACGPDLDFLAKWYDPELRKTLDGLMNASFERITYTEAIDLLQ---RSGRSFEFPTQWGSDMQSEHERYLTEEVFNKPVIVTDYPKDIKAFYMRGNDDGKTVAAMDVLAPRIGEIIGGSQREERHDVLLQRIREMAAHGLREEAYWWYLDLRRFGGVEHAGFGMGFERMLMYLTGMKNIRDVIPFPRTPGNAE 460
BLAST of FC929270 vs. ExPASy Swiss-Prot
Match: SYN_SHISS (Asparaginyl-tRNA synthetase OS=Shigella sonnei (strain Ss046) GN=asnS PE=3 SV=1) HSP 1 Score: 224.557 bits (571), Expect = 5.398e-58 Identity = 110/191 (57.59%), Postives = 134/191 (70.16%), Query Frame = 3 Query: 9 LLDHCFDDMEFMAKNYDKSCINRLRMVASTPFERITYTXXXXXXXXXXKEGKHFENKVEWGIDLASEHERYLTEVKFQKPVIVYNYPKGIKAFYMRLNDDLKTVAAMDVLVPKVGELIGGSQREERYDVIKSRIEDMGLPLEPYEWYLDLRRFGTVKHSGFGLGFERMILFATGIDNIRDVIPFPRYPGRA 581 +L+ DDM+F A+ DK ++RL F ++ YT G+ FEN V WG+DL+SEHERYL E F+ PV+V NYPK IKAFYMRLN+D KTVAAMDVL P +GE+IGGSQREER DV+ R+ +MGL E Y WY DLRR+GTV HSGFGLGFER+I + TG+ N+RDVIPFPR P A Sbjct: 277 VLEERADDMKFFAERVDKDAVSRLERFIEADFAQVDYTDAVTILENC---GRKFENPVYWGVDLSSEHERYLAEEHFKAPVVVKNYPKDIKAFYMRLNEDGKTVAAMDVLAPGIGEIIGGSQREERLDVLDERMLEMGLNKEDYWWYRDLRRYGTVPHSGFGLGFERLIAYVTGVQNVRDVIPFPRTPRNA 464
BLAST of FC929270 vs. ExPASy Swiss-Prot
Match: SYN_SHIFL (Asparaginyl-tRNA synthetase OS=Shigella flexneri GN=asnS PE=3 SV=2) HSP 1 Score: 224.557 bits (571), Expect = 5.398e-58 Identity = 110/191 (57.59%), Postives = 134/191 (70.16%), Query Frame = 3 Query: 9 LLDHCFDDMEFMAKNYDKSCINRLRMVASTPFERITYTXXXXXXXXXXKEGKHFENKVEWGIDLASEHERYLTEVKFQKPVIVYNYPKGIKAFYMRLNDDLKTVAAMDVLVPKVGELIGGSQREERYDVIKSRIEDMGLPLEPYEWYLDLRRFGTVKHSGFGLGFERMILFATGIDNIRDVIPFPRYPGRA 581 +L+ DDM+F A+ DK ++RL F ++ YT G+ FEN V WG+DL+SEHERYL E F+ PV+V NYPK IKAFYMRLN+D KTVAAMDVL P +GE+IGGSQREER DV+ R+ +MGL E Y WY DLRR+GTV HSGFGLGFER+I + TG+ N+RDVIPFPR P A Sbjct: 277 VLEERADDMKFFAERVDKDAVSRLERFIEADFAQVDYTDAVTILENC---GRKFENPVYWGVDLSSEHERYLAEEHFKAPVVVKNYPKDIKAFYMRLNEDGKTVAAMDVLAPGIGEIIGGSQREERLDVLDERMLEMGLNKEDYWWYRDLRRYGTVPHSGFGLGFERLIAYVTGVQNVRDVIPFPRTPRNA 464
BLAST of FC929270 vs. ExPASy Swiss-Prot
Match: SYN_SHIF8 (Asparaginyl-tRNA synthetase OS=Shigella flexneri serotype 5b (strain 8401) GN=asnS PE=3 SV=1) HSP 1 Score: 224.557 bits (571), Expect = 5.398e-58 Identity = 110/191 (57.59%), Postives = 134/191 (70.16%), Query Frame = 3 Query: 9 LLDHCFDDMEFMAKNYDKSCINRLRMVASTPFERITYTXXXXXXXXXXKEGKHFENKVEWGIDLASEHERYLTEVKFQKPVIVYNYPKGIKAFYMRLNDDLKTVAAMDVLVPKVGELIGGSQREERYDVIKSRIEDMGLPLEPYEWYLDLRRFGTVKHSGFGLGFERMILFATGIDNIRDVIPFPRYPGRA 581 +L+ DDM+F A+ DK ++RL F ++ YT G+ FEN V WG+DL+SEHERYL E F+ PV+V NYPK IKAFYMRLN+D KTVAAMDVL P +GE+IGGSQREER DV+ R+ +MGL E Y WY DLRR+GTV HSGFGLGFER+I + TG+ N+RDVIPFPR P A Sbjct: 277 VLEERADDMKFFAERVDKDAVSRLERFIEADFAQVDYTDAVTILENC---GRKFENPVYWGVDLSSEHERYLAEEHFKAPVVVKNYPKDIKAFYMRLNEDGKTVAAMDVLAPGIGEIIGGSQREERLDVLDERMLEMGLNKEDYWWYRDLRRYGTVPHSGFGLGFERLIAYVTGVQNVRDVIPFPRTPRNA 464
BLAST of FC929270 vs. ExPASy Swiss-Prot
Match: SYN_SHIBS (Asparaginyl-tRNA synthetase OS=Shigella boydii serotype 4 (strain Sb227) GN=asnS PE=3 SV=1) HSP 1 Score: 224.557 bits (571), Expect = 5.398e-58 Identity = 110/191 (57.59%), Postives = 134/191 (70.16%), Query Frame = 3 Query: 9 LLDHCFDDMEFMAKNYDKSCINRLRMVASTPFERITYTXXXXXXXXXXKEGKHFENKVEWGIDLASEHERYLTEVKFQKPVIVYNYPKGIKAFYMRLNDDLKTVAAMDVLVPKVGELIGGSQREERYDVIKSRIEDMGLPLEPYEWYLDLRRFGTVKHSGFGLGFERMILFATGIDNIRDVIPFPRYPGRA 581 +L+ DDM+F A+ DK ++RL F ++ YT G+ FEN V WG+DL+SEHERYL E F+ PV+V NYPK IKAFYMRLN+D KTVAAMDVL P +GE+IGGSQREER DV+ R+ +MGL E Y WY DLRR+GTV HSGFGLGFER+I + TG+ N+RDVIPFPR P A Sbjct: 277 VLEERADDMKFFAERVDKDAVSRLERFIEADFAQVDYTDAVTILENC---GRKFENPVYWGVDLSSEHERYLAEEHFKAPVVVKNYPKDIKAFYMRLNEDGKTVAAMDVLAPGIGEIIGGSQREERLDVLDERMLEMGLNKEDYWWYRDLRRYGTVPHSGFGLGFERLIAYVTGVQNVRDVIPFPRTPRNA 464 The following BLAST results are available for this feature:
BLAST of FC929270 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 320
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Sequences
The
following sequences are available for this feature:
EST sequence >FC929270 ID=FC929270; Name=FC929270; organism=Citrus clementina; type=EST; length=822bpback to top |