FC929270
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC929270 vs. ExPASy Swiss-Prot
Match: SYN_SHESM (Asparaginyl-tRNA synthetase OS=Shewanella sp. (strain MR-4) GN=asnS PE=3 SV=1) HSP 1 Score: 224.172 bits (570), Expect = 7.049e-58 Identity = 110/186 (59.14%), Postives = 136/186 (73.12%), Query Frame = 3 Query: 27 DDMEFMAKNYDKSCINRLRMVASTPFERITYTXXXXXXXXXXKEGKHFENKVEWGIDLASEHERYLTEVKFQKPVIVYNYPKGIKAFYMRLNDDLKTVAAMDVLVPKVGELIGGSQREERYDVIKSRIEDMGLPLEPYEWYLDLRRFGTVKHSGFGLGFERMILFATGIDNIRDVIPFPRYPGRAD 584 DD++F A++ DK+ I RL+ S+ F ++ YT K G+ FE V WGIDL+SEHERYL E F+ PV+V NYPK IKAFYMRLN+D KTVAAMDVL P +GE+IGGSQREER DV+ R+E+M L E Y WY DLRR+GTV H+GFGLGFER++ + TG+ NIRDVIPFPR P A+ Sbjct: 283 DDLQFFAQHVDKTVIERLQSFVSSDFAQVDYTDAVEILQ---KCGREFEFPVSWGIDLSSEHERYLAEEHFKAPVVVKNYPKDIKAFYMRLNEDGKTVAAMDVLAPGIGEIIGGSQREERLDVLDMRLEEMDLNKEDYWWYRDLRRYGTVPHAGFGLGFERLVSYVTGVSNIRDVIPFPRAPRTAN 465
BLAST of FC929270 vs. ExPASy Swiss-Prot
Match: SYN_HAEIG (Asparaginyl-tRNA synthetase OS=Haemophilus influenzae (strain PittGG) GN=asnS PE=3 SV=1) HSP 1 Score: 224.172 bits (570), Expect = 7.049e-58 Identity = 110/186 (59.14%), Postives = 135/186 (72.58%), Query Frame = 3 Query: 27 DDMEFMAKNYDKSCINRLRMVASTPFERITYTXXXXXXXXXXKEGKHFENKVEWGIDLASEHERYLTEVKFQKPVIVYNYPKGIKAFYMRLNDDLKTVAAMDVLVPKVGELIGGSQREERYDVIKSRIEDMGLPLEPYEWYLDLRRFGTVKHSGFGLGFERMILFATGIDNIRDVIPFPRYPGRAD 584 DD++F K+ DK I RL ++ F +I YT K GK FE V WGIDL+SEHER+L E F+ PV+V NYPK IKAFYMRLNDD KTVAAMDVL P +GE+IGGSQREER +V+ R+E+MGL + Y WY DLR++G+V HSGFGLGFER+I++ TG+ NIRDVIPFPR P A+ Sbjct: 284 DDLQFFEKHVDKDVITRLENFVNSDFAQIDYTDAIDVLL---KSGKKFEFPVSWGIDLSSEHERFLAEEYFKSPVVVKNYPKDIKAFYMRLNDDGKTVAAMDVLAPGIGEIIGGSQREERLEVLDKRMEEMGLNPDDYWWYRDLRKYGSVPHSGFGLGFERLIVYVTGVQNIRDVIPFPRAPRNAN 466
BLAST of FC929270 vs. ExPASy Swiss-Prot
Match: SYN_HAEIE (Asparaginyl-tRNA synthetase OS=Haemophilus influenzae (strain PittEE) GN=asnS PE=3 SV=1) HSP 1 Score: 224.172 bits (570), Expect = 7.049e-58 Identity = 110/186 (59.14%), Postives = 135/186 (72.58%), Query Frame = 3 Query: 27 DDMEFMAKNYDKSCINRLRMVASTPFERITYTXXXXXXXXXXKEGKHFENKVEWGIDLASEHERYLTEVKFQKPVIVYNYPKGIKAFYMRLNDDLKTVAAMDVLVPKVGELIGGSQREERYDVIKSRIEDMGLPLEPYEWYLDLRRFGTVKHSGFGLGFERMILFATGIDNIRDVIPFPRYPGRAD 584 DD++F K+ DK I RL ++ F +I YT K GK FE V WGIDL+SEHER+L E F+ PV+V NYPK IKAFYMRLNDD KTVAAMDVL P +GE+IGGSQREER +V+ R+E+MGL + Y WY DLR++G+V HSGFGLGFER+I++ TG+ NIRDVIPFPR P A+ Sbjct: 284 DDLQFFEKHVDKDVITRLENFVNSDFAQIDYTDAIDVLL---KSGKKFEFPVSWGIDLSSEHERFLAEEYFKSPVVVKNYPKDIKAFYMRLNDDGKTVAAMDVLAPGIGEIIGGSQREERLEVLDKRMEEMGLNPDDYWWYRDLRKYGSVPHSGFGLGFERLIVYVTGVQNIRDVIPFPRAPRNAN 466
BLAST of FC929270 vs. ExPASy Swiss-Prot
Match: SYN_HAEDU (Asparaginyl-tRNA synthetase OS=Haemophilus ducreyi GN=asnS PE=3 SV=1) HSP 1 Score: 224.172 bits (570), Expect = 7.049e-58 Identity = 111/192 (57.81%), Postives = 138/192 (71.88%), Query Frame = 3 Query: 9 LLDHCFDDMEFMAKNYDKSCINRLRMVASTPFERITYTXXXXXXXXXXKEGKHFENKVEWGIDLASEHERYLTEVKFQKPVIVYNYPKGIKAFYMRLNDDLKTVAAMDVLVPKVGELIGGSQREERYDVIKSRIEDMGLPLEPYEWYLDLRRFGTVKHSGFGLGFERMILFATGIDNIRDVIPFPRYPGRAD 584 +L+ DDM+F AK+ DK I RL + PF ++ Y+ K GK FE V WG+DL+SEHER+L E F+ PV+V NYPK IKAFYMRLNDD KTVAAMDVL P +GE+IGGSQREER V+ SR+ +MGL E Y WY DLR++GTV H+GFGLGFER+I++ TG+ NIR+VIPFPR P A+ Sbjct: 278 VLEERKDDMQFFAKHIDKEVITRLENFIAAPFAQVDYSDAIEILL---KSGKKFEFPVAWGVDLSSEHERFLAEEHFKSPVVVKNYPKDIKAFYMRLNDDGKTVAAMDVLAPGIGEIIGGSQREERLAVLDSRMIEMGLNPEDYWWYRDLRKYGTVPHAGFGLGFERLIVYVTGLQNIREVIPFPRAPRNAN 466
BLAST of FC929270 vs. ExPASy Swiss-Prot
Match: SYN_DESPS (Asparaginyl-tRNA synthetase OS=Desulfotalea psychrophila GN=asnS PE=3 SV=1) HSP 1 Score: 224.172 bits (570), Expect = 7.049e-58 Identity = 109/191 (57.07%), Postives = 137/191 (71.73%), Query Frame = 3 Query: 9 LLDHCFDDMEFMAKNYDKSCINRLRMVASTPFERITYTXXXXXXXXXXKEGKHFENKVEWGIDLASEHERYLTEVKFQKPVIVYNYPKGIKAFYMRLNDDLKTVAAMDVLVPKVGELIGGSQREERYDVIKSRIEDMGLPLEPYEWYLDLRRFGTVKHSGFGLGFERMILFATGIDNIRDVIPFPRYPGRA 581 +L+HC DM K K I RL+ V + F R+TYT G+ F+ V+WGIDL SEHERYLTE +++P+IV +YP IK FYMR+N+D KTVAAMD+LVP +GEL+GGSQREERYD++ R+E GL LE Y WYLDLR++GTV H+GFGLGFER++ F TG+ NIR+VIPFPR PG A Sbjct: 260 VLEHCVTDMNLFDKFISKGIIERLQSVLAHDFARVTYTEAVDQLLA---SGQKFDFAVKWGIDLQSEHERYLTEQVYKRPLIVTDYPAAIKPFYMRMNEDGKTVAAMDILVPGIGELVGGSQREERYDLLAERMEAAGLDLEEYGWYLDLRKYGTVPHAGFGLGFERLVQFVTGMANIREVIPFPRTPGFA 447
BLAST of FC929270 vs. ExPASy Swiss-Prot
Match: SYN_SHIDS (Asparaginyl-tRNA synthetase OS=Shigella dysenteriae serotype 1 (strain Sd197) GN=asnS PE=3 SV=1) HSP 1 Score: 223.787 bits (569), Expect = 9.207e-58 Identity = 110/191 (57.59%), Postives = 134/191 (70.16%), Query Frame = 3 Query: 9 LLDHCFDDMEFMAKNYDKSCINRLRMVASTPFERITYTXXXXXXXXXXKEGKHFENKVEWGIDLASEHERYLTEVKFQKPVIVYNYPKGIKAFYMRLNDDLKTVAAMDVLVPKVGELIGGSQREERYDVIKSRIEDMGLPLEPYEWYLDLRRFGTVKHSGFGLGFERMILFATGIDNIRDVIPFPRYPGRA 581 +L+ DDM+F A+ DK ++RL F ++ YT G+ FEN V WG+DL+SEHERYL E F+ PV+V NYPK IKAFYMRLN+D KTVAAMDVL P +GE+IGGSQREER DV+ R+ +MGL E Y WY DLRR+GTV HSGFGLGFER+I + TG+ N+RDVIPFPR P A Sbjct: 277 VLEERADDMKFFAERVDKDAVSRLERFIEADFAQVDYTDAVTILENC---GRKFENPVYWGVDLSSEHERYLAEEHFKAPVVVKNYPKDIKAFYMRLNEDGKTVAAMDVLAPGIGEIIGGSQREERLDVLDVRMLEMGLNKEDYWWYRDLRRYGTVPHSGFGLGFERLIAYVTGVQNVRDVIPFPRTPRNA 464
BLAST of FC929270 vs. ExPASy Swiss-Prot
Match: SYN_PASMU (Asparaginyl-tRNA synthetase OS=Pasteurella multocida GN=asnS PE=3 SV=2) HSP 1 Score: 223.787 bits (569), Expect = 9.207e-58 Identity = 112/192 (58.33%), Postives = 137/192 (71.35%), Query Frame = 3 Query: 9 LLDHCFDDMEFMAKNYDKSCINRLRMVASTPFERITYTXXXXXXXXXXKEGKHFENKVEWGIDLASEHERYLTEVKFQKPVIVYNYPKGIKAFYMRLNDDLKTVAAMDVLVPKVGELIGGSQREERYDVIKSRIEDMGLPLEPYEWYLDLRRFGTVKHSGFGLGFERMILFATGIDNIRDVIPFPRYPGRAD 584 +L+ DD++F K+ D I+RL ++ F +I YT + GK FE V WGIDL+SEHERYL E F+ PV+V NYPK IKAFYMRLNDD KTVAAMDVL P +GE+IGGSQREER DV+ R+ +MGL E Y WY DLRR+GTV H+GFGLGFER+I++ TG+ NIRDVIPFPR P A+ Sbjct: 278 VLEERKDDLKFFEKHVDNDVISRLENFINSDFAQIDYTDAIEVLL---QSGKKFEFPVSWGIDLSSEHERYLAEEHFKSPVVVKNYPKDIKAFYMRLNDDGKTVAAMDVLAPGIGEIIGGSQREERLDVLDKRMIEMGLNPEDYWWYRDLRRYGTVPHAGFGLGFERLIVYVTGVQNIRDVIPFPRSPRNAN 466
BLAST of FC929270 vs. ExPASy Swiss-Prot
Match: SYN_SHEFN (Asparaginyl-tRNA synthetase OS=Shewanella frigidimarina (strain NCIMB 400) GN=asnS PE=3 SV=1) HSP 1 Score: 223.402 bits (568), Expect = 1.202e-57 Identity = 111/191 (58.12%), Postives = 135/191 (70.68%), Query Frame = 3 Query: 9 LLDHCFDDMEFMAKNYDKSCINRLRMVASTPFERITYTXXXXXXXXXXKEGKHFENKVEWGIDLASEHERYLTEVKFQKPVIVYNYPKGIKAFYMRLNDDLKTVAAMDVLVPKVGELIGGSQREERYDVIKSRIEDMGLPLEPYEWYLDLRRFGTVKHSGFGLGFERMILFATGIDNIRDVIPFPRYPGRA 581 +L+ DD+ F + DK+ I RL+ S+ F ++ YT GK FE VEWGIDL SEHERYL E F+ PV+V NYPK IKAFYMRLNDD KTVAAMDVL P +GE+IGG+QREER DV+ +R+ +M L E Y WY DLRR+GTV HSGFGLGFER++ + TG++NIRDVIPFPR P A Sbjct: 277 VLEERMDDLNFFNERVDKTVIERLQAFVSSDFAQVDYTDAVEILKNC---GKKFEFAVEWGIDLQSEHERYLAEEHFKAPVVVKNYPKDIKAFYMRLNDDGKTVAAMDVLAPGIGEIIGGAQREERLDVLDARLAEMDLSQEDYWWYRDLRRYGTVPHSGFGLGFERLVSYVTGVNNIRDVIPFPRAPRSA 464
BLAST of FC929270 vs. ExPASy Swiss-Prot
Match: SYN_CLOB8 (Asparaginyl-tRNA synthetase OS=Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) GN=asnS PE=3 SV=1) HSP 1 Score: 223.402 bits (568), Expect = 1.202e-57 Identity = 106/193 (54.92%), Postives = 141/193 (73.06%), Query Frame = 3 Query: 6 WLLDHCFDDMEFMAKNYDKSCINRLRMVASTPFERITYTXXXXXXXXXXKEGKHFENKVEWGIDLASEHERYLTEVKFQKPVIVYNYPKGIKAFYMRLNDDLKTVAAMDVLVPKVGELIGGSQREERYDVIKSRIEDMGLPLEPYEWYLDLRRFGTVKHSGFGLGFERMILFATGIDNIRDVIPFPRYPGRAD 584 +++D C +++EF + DK + RL V S+ F ++TYT K GK F+ V WGIDL +EHERYLTE F+KP+ V +YPK IKAFYMRLNDD KTVAA D+LVP +GE+IGGSQREER DV+K R+ ++ L + Y WYL+LR++G KH+GFGLGFER+I++ TG+ NIRDV+PFPR PG ++ Sbjct: 274 YVMDECPEELEFFNQFVDKGLLERLNHVVSSDFAKVTYTEAVEILQ---KCGKKFDYDVSWGIDLQTEHERYLTEEHFKKPLFVTDYPKDIKAFYMRLNDDGKTVAATDLLVPGIGEIIGGSQREERLDVLKDRMTELNLSEDDYWWYLELRKYGETKHAGFGLGFERLIMYITGMTNIRDVVPFPRTPGTSE 463
BLAST of FC929270 vs. ExPASy Swiss-Prot
Match: SYN_SHEHH (Asparaginyl-tRNA synthetase OS=Shewanella halifaxensis (strain HAW-EB4) GN=asnS PE=3 SV=1) HSP 1 Score: 223.016 bits (567), Expect = 1.570e-57 Identity = 113/200 (56.50%), Postives = 138/200 (69.00%), Query Frame = 3 Query: 9 LLDHCF--------DDMEFMAKNYDKSCINRLRMVASTPFERITYTXXXXXXXXXXKEGKHFENKVEWGIDLASEHERYLTEVKFQKPVIVYNYPKGIKAFYMRLNDDLKTVAAMDVLVPKVGELIGGSQREERYDVIKSRIEDMGLPLEPYEWYLDLRRFGTVKHSGFGLGFERMILFATGIDNIRDVIPFPRYPGRAD 584 +L +CF DD+EF A+ +K+ I RL S+ F +I YT K+ FE VEWGIDL SEHERYL E F+ PV+V NYPK IKAFYMRLNDD KTVAAMDVL P +GE+IGG+QREER DV+ +R+ +M L E Y WY DLRR+GTV H+GFGLGFER++ + TG+ NIRDVIPFPR P A+ Sbjct: 269 MLKYCFKAVLEERRDDLEFFAQRVEKTAIERLEAFVSSDFAQIDYTDAIEILKACDKD---FEYDVEWGIDLHSEHERYLAEEHFKAPVVVKNYPKDIKAFYMRLNDDGKTVAAMDVLAPGIGEIIGGAQREERLDVLDARLAEMELSQEDYWWYRDLRRYGTVPHAGFGLGFERLVSYVTGVSNIRDVIPFPRSPKSAN 465 The following BLAST results are available for this feature:
BLAST of FC929270 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 320
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Sequences
The
following sequences are available for this feature:
EST sequence >FC929270 ID=FC929270; Name=FC929270; organism=Citrus clementina; type=EST; length=822bpback to top |