FC929318

Overview
NameFC929318
Unique NameFC929318
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length740
Libraries
Library NameType
PhII-IIIV1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15007 contig Ccv1_Contig15007:1..740. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC929318 vs. ExPASy Swiss-Prot
Match: FKBP3_DEBHA (FK506-binding protein 3 OS=Debaryomyces hansenii GN=FPR3 PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.379e-14
Identity = 41/91 (45.05%), Postives = 59/91 (64.84%), Query Frame = 3
Query:  168 AHKGDKIKVHYRGKLTDGTVFDSSFERGDPIEFELGSGHVIKGWDQGLLGMCVGEKRKLKIPAKLGYGAQGSPPTIPGGATLIFDTELVTV 440
            A  G+K+ + Y GKL +G VFD +   G P  F LG G  IKG+D G+ GM VG +R++ IP K+GYG+Q + P +P  + L FD +LV++
Sbjct:  348 AKSGNKVGIRYIGKLKNGKVFDKNTS-GKPFVFGLGKGECIKGFDLGVAGMAVGGERRVVIPPKMGYGSQ-ALPGLPANSELTFDIKLVSI 436          
BLAST of FC929318 vs. ExPASy Swiss-Prot
Match: FKBP3_RABIT (FK506-binding protein 3 OS=Oryctolagus cuniculus GN=FKBP3 PE=2 SV=2)

HSP 1 Score: 79.7221 bits (195), Expect = 1.801e-14
Identity = 42/98 (42.86%), Postives = 58/98 (59.18%), Query Frame = 3
Query:  174 KGDKIKVHYRGKLTDGTVFDSSFERGD-------PIEFELGSGHVIKGWDQGLLGMCVGEKRKLKIPAKLGYGAQGSPPT-IPGGATLIFDTELVTVN 443
            KGD +   Y G L DGTVFD++ +          P+ F++G G VI+GWD+ LL M  GEK +L+I  +  YG +G P   IP  A LIF+ ELV ++
Sbjct:  127 KGDVVHCWYTGTLQDGTVFDTNIQTSSKKKKNAKPLSFKVGVGKVIRGWDEALLTMSKGEKARLEIEPEWAYGKKGQPDAKIPPNAKLIFEVELVDID 224          
BLAST of FC929318 vs. ExPASy Swiss-Prot
Match: FKBP3_BOVIN (FK506-binding protein 3 OS=Bos taurus GN=FKBP3 PE=1 SV=2)

HSP 1 Score: 79.7221 bits (195), Expect = 1.801e-14
Identity = 42/98 (42.86%), Postives = 58/98 (59.18%), Query Frame = 3
Query:  174 KGDKIKVHYRGKLTDGTVFDSSFERGD-------PIEFELGSGHVIKGWDQGLLGMCVGEKRKLKIPAKLGYGAQGSPPT-IPGGATLIFDTELVTVN 443
            KGD +   Y G L DGTVFD++ +          P+ F++G G VI+GWD+ LL M  GEK +L+I  +  YG +G P   IP  A LIF+ ELV ++
Sbjct:  127 KGDVVHCWYTGTLQDGTVFDTNIQTSSKKKKNAKPLSFKVGIGKVIRGWDEALLTMSKGEKARLEIEPEWAYGKKGQPDAKIPPNAKLIFEVELVDID 224          
BLAST of FC929318 vs. ExPASy Swiss-Prot
Match: FKBA_ECOLI (FKBP-type peptidyl-prolyl cis-trans isomerase fkpA OS=Escherichia coli (strain K12) GN=fkpA PE=1 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.353e-14
Identity = 46/108 (42.59%), Postives = 62/108 (57.41%), Query Frame = 3
Query:  162 IQAHKG------DKIKVHYRGKLTDGTVFDSSFERGDPIEFELGSGHVIKGWDQGLLGMCVGEKRKLKIPAKLGYGAQGSPPTIPGGATLIFDTELVTVNGKPASGEK 467
            ++A KG      D + V+Y+G L DG  FD+S+ RG+P+ F L    VI GW +GL  +  G K KL IP +L YG  G  P IP  +TL+FD EL+ V   P +  K
Sbjct:  153 VEAGKGEAPKDSDTVVVNYKGTLIDGKEFDNSYTRGEPLSFRLDG--VIPGWTEGLKNIKKGGKIKLVIPPELAYGKAG-VPGIPPNSTLVFDVELLDVKPAPKADAK 257          
BLAST of FC929318 vs. ExPASy Swiss-Prot
Match: FKBA_ECOL6 (FKBP-type peptidyl-prolyl cis-trans isomerase fkpA OS=Escherichia coli O6 GN=fkpA PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.353e-14
Identity = 46/108 (42.59%), Postives = 62/108 (57.41%), Query Frame = 3
Query:  162 IQAHKG------DKIKVHYRGKLTDGTVFDSSFERGDPIEFELGSGHVIKGWDQGLLGMCVGEKRKLKIPAKLGYGAQGSPPTIPGGATLIFDTELVTVNGKPASGEK 467
            ++A KG      D + V+Y+G L DG  FD+S+ RG+P+ F L    VI GW +GL  +  G K KL IP +L YG  G  P IP  +TL+FD EL+ V   P +  K
Sbjct:  153 VEAGKGEAPKDSDTVVVNYKGTLIDGKEFDNSYTRGEPLSFRLDG--VIPGWTEGLKNIKKGGKIKLVIPPELAYGKAG-VPGIPPNSTLVFDVELLDVKPAPKADAK 257          
BLAST of FC929318 vs. ExPASy Swiss-Prot
Match: FKBA_ECO57 (FKBP-type peptidyl-prolyl cis-trans isomerase fkpA OS=Escherichia coli O157:H7 GN=fkpA PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.353e-14
Identity = 46/108 (42.59%), Postives = 62/108 (57.41%), Query Frame = 3
Query:  162 IQAHKG------DKIKVHYRGKLTDGTVFDSSFERGDPIEFELGSGHVIKGWDQGLLGMCVGEKRKLKIPAKLGYGAQGSPPTIPGGATLIFDTELVTVNGKPASGEK 467
            ++A KG      D + V+Y+G L DG  FD+S+ RG+P+ F L    VI GW +GL  +  G K KL IP +L YG  G  P IP  +TL+FD EL+ V   P +  K
Sbjct:  153 VEAGKGEAPKDSDTVVVNYKGTLIDGKEFDNSYTRGEPLSFRLDG--VIPGWTEGLKNIKKGGKIKLVIPPELAYGKAG-VPGIPPNSTLVFDVELLDVKPAPKADAK 257          
BLAST of FC929318 vs. ExPASy Swiss-Prot
Match: FKB1B_RABIT (Peptidyl-prolyl cis-trans isomerase FKBP1B OS=Oryctolagus cuniculus GN=FKBP1B PE=3 SV=3)

HSP 1 Score: 78.9518 bits (193), Expect = 3.073e-14
Identity = 39/89 (43.82%), Postives = 52/89 (58.43%), Query Frame = 3
Query:  174 KGDKIKVHYRGKLTDGTVFDSSFERGDPIEFELGSGHVIKGWDQGLLGMCVGEKRKLKIPAKLGYGAQGSPPTIPGGATLIFDTELVTV 440
            KG    VHY G L +G  FDSS +R  P +F +G   VIKG+++G   M +G++ KL     + YGA G P  IP  ATLIF  EL+ +
Sbjct:   19 KGQTCVVHYTGMLQNGKKFDSSRDRNKPFKFRIGKQEVIKGFEEGAAQMSLGQRAKLTCTPDVAYGATGHPGVIPPNATLIFGVELLNL 107          
BLAST of FC929318 vs. ExPASy Swiss-Prot
Match: MIP_TRYCR (Macrophage infectivity potentiator OS=Trypanosoma cruzi GN=MIP PE=1 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 5.242e-14
Identity = 45/98 (45.92%), Postives = 57/98 (58.16%), Query Frame = 3
Query:  180 DKIKVHYRGKLTDGTVFDSSFERGDPIEFELGSGHVIKGWDQGLLGMCVGEKRKLKIPAKLGYGAQGSPPTIPGGATLIFDTELVTV--NGKPASGEK 467
            DK +VHY G+L DGTVFDSS ERG P  F      VIKGW + L  M  G++ +L IP  L YG  G    IP  + L FD EL+++   GK  + E+
Sbjct:   86 DKCEVHYTGRLRDGTVFDSSRERGKPTTFR--PNEVIKGWTEALQLMREGDRWRLFIPYDLAYGVTGGGGMIPPYSPLEFDVELISIKDGGKGRTAEE 181          
BLAST of FC929318 vs. ExPASy Swiss-Prot
Match: FKBP3_MOUSE (FK506-binding protein 3 OS=Mus musculus GN=Fkbp3 PE=1 SV=2)

HSP 1 Score: 78.1814 bits (191), Expect = 5.242e-14
Identity = 41/98 (41.84%), Postives = 57/98 (58.16%), Query Frame = 3
Query:  174 KGDKIKVHYRGKLTDGTVFDSSFERGD-------PIEFELGSGHVIKGWDQGLLGMCVGEKRKLKIPAKLGYGAQGSPPT-IPGGATLIFDTELVTVN 443
            KGD +   Y G L DGTVFD++ +          P+ F++G G VI+GWD+ LL M  GEK +L+I  +  YG +G P   IP    LIF+ ELV ++
Sbjct:  127 KGDVVHCWYTGTLPDGTVFDTNIQTSSKKKKNAKPLSFKVGVGKVIRGWDEALLTMSKGEKARLEIEPEWAYGKKGQPDAKIPPNTKLIFEVELVDID 224          
BLAST of FC929318 vs. ExPASy Swiss-Prot
Match: FKBP3_HUMAN (FK506-binding protein 3 OS=Homo sapiens GN=FKBP3 PE=1 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 6.846e-14
Identity = 41/98 (41.84%), Postives = 57/98 (58.16%), Query Frame = 3
Query:  174 KGDKIKVHYRGKLTDGTVFDSSFE-------RGDPIEFELGSGHVIKGWDQGLLGMCVGEKRKLKIPAKLGYGAQGSPPT-IPGGATLIFDTELVTVN 443
            KGD +   Y G L DGTVFD++ +          P+ F++G G VI+GWD+ LL M  GEK +L+I  +  YG +G P   IP  A L F+ ELV ++
Sbjct:  127 KGDVVHCWYTGTLQDGTVFDTNIQTSAKKKKNAKPLSFKVGVGKVIRGWDEALLTMSKGEKARLEIEPEWAYGKKGQPDAKIPPNAKLTFEVELVDID 224          
The following BLAST results are available for this feature:
BLAST of FC929318 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 130
Match NameE-valueIdentityDescription
FKBP3_DEBHA1.379e-1445.05FK506-binding protein 3 OS=Debaryomyces hansenii G... [more]
FKBP3_RABIT1.801e-1442.86FK506-binding protein 3 OS=Oryctolagus cuniculus G... [more]
FKBP3_BOVIN1.801e-1442.86FK506-binding protein 3 OS=Bos taurus GN=FKBP3 PE=... [more]
FKBA_ECOLI2.353e-1442.59FKBP-type peptidyl-prolyl cis-trans isomerase fkpA... [more]
FKBA_ECOL62.353e-1442.59FKBP-type peptidyl-prolyl cis-trans isomerase fkpA... [more]
FKBA_ECO572.353e-1442.59FKBP-type peptidyl-prolyl cis-trans isomerase fkpA... [more]
FKB1B_RABIT3.073e-1443.82Peptidyl-prolyl cis-trans isomerase FKBP1B OS=Oryc... [more]
MIP_TRYCR5.242e-1445.92Macrophage infectivity potentiator OS=Trypanosoma ... [more]
FKBP3_MOUSE5.242e-1441.84FK506-binding protein 3 OS=Mus musculus GN=Fkbp3 P... [more]
FKBP3_HUMAN6.846e-1441.84FK506-binding protein 3 OS=Homo sapiens GN=FKBP3 P... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAH3DF09RM1 PhII-IIIV1 Citrus clementina cDNA clone KN0AAH3DF09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929318 ID=FC929318; Name=FC929318; organism=Citrus clementina; type=EST; length=740bp
GACAAACAGAGAGAATTGTGAAGATGAGTTTCAACTCAGTATTGAATATC
GCCGCTGCAATTTCGTTCCTTTTGGTTCTTTCGACGTTAGTTTCTGCTAA
CAAGTCAGGCGATGTAACAGAGTTACAGATTGGCGTAAAGTACAAGCCAA
AAACCTGTGACATTCAGGCTCACAAAGGTGATAAAATCAAAGTACATTAC
CGGGGAAAACTGACTGATGGAACTGTTTTTGATTCCAGTTTTGAAAGAGG
TGATCCCATTGAATTTGAGCTTGGCAGCGGTCATGTAATCAAAGGATGGG
ACCAAGGACTTTTGGGAATGTGCGTCGGTGAGAAGCGAAAGTTGAAAATT
CCTGCAAAGCTTGGTTATGGGGCCCAGGGTTCTCCCCCTACCATCCCAGG
TGGAGCAACATTGATCTTTGACACCGAGCTTGTAACAGTAAATGGGAAAC
CAGCAAGCGGAGAGAAAACTGAAGATGAGCTATGATTACCTCTCGATTGA
GCAGATTTACCTAAGTCATTCCTGTTGCTTTTAATGTATCGGCATAAACC
AGGTTTCATAGGCCAGAATAATTTATCTATTTAGTGACCTACAGCTGAAC
AATTTTTGTTGTTTGGATCAGAAGAAATCTTTTTAAGGGGACAAAATATT
AATCTCTGAATATTCGGAAGGTTGGTTGCCTCGCTCTTAAGTGATGCGAA
CATAGCATTATTAGATTTTTCGCAAAAAAAAAAAAAAAAA
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