FC929318

Overview
NameFC929318
Unique NameFC929318
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length740
Libraries
Library NameType
PhII-IIIV1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15007 contig Ccv1_Contig15007:1..740. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC929318 vs. ExPASy Swiss-Prot
Match: FKBP7_PONAB (FK506-binding protein 7 OS=Pongo abelii GN=FKBP7 PE=2 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 5.600e-16
Identity = 56/137 (40.88%), Postives = 71/137 (51.82%), Query Frame = 3
Query:   66 FLLVLSTLVSANKSGDVTELQIGVKYKPKTCDIQAHKGDKIKVHYRGKLT-DGTVFDSSFER--GDPIEFELGSGHVIKGWDQGLLGMCVGEKRKLKIPAKLGYGAQG-SPPTIPGGATLIFDTELVTVNGKPASGE 464
            +L  L T     K     E++I V ++P+ C   + KGD +  HY G L  DG+ F  S  +  G P  F LG G VIKG D  +  MC GEKRK+ IP    YG +G +   IP  ATLIF+ EL  V   P S E
Sbjct:   16 YLWGLFTAQRQKKEERTEEVKIEVLHRPENCSKTSKKGDLLNAHYDGYLAKDGSKFYCSRTQNEGHPKWFVLGVGQVIKGLDIAMTDMCPGEKRKVVIPPSFAYGKEGYAEGKIPPDATLIFEIELYAVTKGPRSTE 152          
BLAST of FC929318 vs. ExPASy Swiss-Prot
Match: FKBP_CANAL (FK506-binding protein 1 OS=Candida albicans GN=RBP1 PE=3 SV=2)

HSP 1 Score: 83.9593 bits (206), Expect = 9.552e-16
Identity = 46/105 (43.81%), Postives = 57/105 (54.29%), Query Frame = 3
Query:  168 AHKGDKIKVHYRGKLTDGTVFDSSFERGDPIEFELGSGHVIKGWDQGLLG-----------MCVGEKRKLKIPAKLGYGAQGSPPTIPGGATLIFDTELVTVNGK 449
            A  GD + +HY GKLT+G  FDSS +RG P    +G G VIKGWD  L             +  G K  L IP  L YG +G PP I    TL+F+ EL+ VNG+
Sbjct:   20 AKPGDTVTIHYDGKLTNGKEFDSSRKRGKPFTCTVGVGQVIKGWDISLTNNYGKGGANLPKISKGTKAILTIPPNLAYGPRGIPPIIGPNETLVFEVELLGVNGQ 124          
BLAST of FC929318 vs. ExPASy Swiss-Prot
Match: FKBP4_YEAST (FK506-binding protein 4 OS=Saccharomyces cerevisiae GN=FPR4 PE=1 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.629e-15
Identity = 43/91 (47.25%), Postives = 59/91 (64.84%), Query Frame = 3
Query:  168 AHKGDKIKVHYRGKLTDGTVFDSSFERGDPIEFELGSGHVIKGWDQGLLGMCVGEKRKLKIPAKLGYGAQGSPPTIPGGATLIFDTELVTV 440
            A KG ++ + Y GKL +G VFD +  +G P  F+LG G VIKGWD G+ GM VG +R++ IPA   YG Q + P IP  + L FD +LV++
Sbjct:  303 AKKGTRVGMRYVGKLKNGKVFDKN-TKGKPFVFKLGQGEVIKGWDIGVAGMAVGGERRIVIPAPYAYGKQ-ALPGIPANSELTFDVKLVSM 391          
BLAST of FC929318 vs. ExPASy Swiss-Prot
Match: FKBP4_SCHPO (FK506-binding protein 39 kDa OS=Schizosaccharomyces pombe GN=fkbp39 PE=1 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.629e-15
Identity = 44/92 (47.83%), Postives = 60/92 (65.22%), Query Frame = 3
Query:  168 AHKGDKIKVHYRGKLTDGTVFDSSFERGDPIEFELGSGHVIKGWDQGLLGMCVGEKRKLKIPAKLGYGAQGSPPTIPGGATLIFDTELVTVN 443
            A  G K+++ Y GKL +G VFD +  +G P  F LG G VI+GWD G+ GM  G +RK+ IPA + YG Q S P IP  +TL+F+ +LV V+
Sbjct:  272 ATNGKKVEMRYIGKLENGKVFDKN-TKGKPFAFILGRGEVIRGWDVGVAGMQEGGERKITIPAPMAYGNQ-SIPGIPKNSTLVFEVKLVRVH 361          
BLAST of FC929318 vs. ExPASy Swiss-Prot
Match: FKBP3_DICDI (FK506-binding protein 3 OS=Dictyostelium discoideum GN=fkbp3 PE=2 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.629e-15
Identity = 56/134 (41.79%), Postives = 73/134 (54.48%), Query Frame = 3
Query:   69 LLVLSTL-VSANKSGDVTELQIGV---KYKPKTCDIQAHKGDKIKVHYRGKLTDGTVFDSS-FERGDPIEFELGSGHVIKGWDQGLLGMCVGEKRKLKIPAKLGYGAQGSPPTIPGGATLIFDTELVTVNGKPA 455
            LLVL+TL VS ++   V+ L+      + K KT  I    GD I + Y GK  DGTVFDSS    G    F +G   VI G + G + +C GEKR +KIP +L YG  G    IP    + FD E+V++ G PA
Sbjct:    8 LLVLATLAVSFSQEIGVSILKTDTPKGECKGKTASI----GDYISLKYVGKFEDGTVFDSSEIHGGFSFNFTIGERKVIPGLEIGTINICEGEKRSIKIPYQLAYGENGIENAIPPRTDIYFDLEVVSIEGAPA 137          
BLAST of FC929318 vs. ExPASy Swiss-Prot
Match: FKBA_BUCBP (FKBP-type peptidyl-prolyl cis-trans isomerase fkpA OS=Buchnera aphidicola subsp. Baizongia pistaciae GN=fkpA PE=3 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.629e-15
Identity = 45/93 (48.39%), Postives = 57/93 (61.29%), Query Frame = 3
Query:  171 HKGDKIKVHYRGKLTDGTVFDSSFERGDPIEFELGSGHVIKGWDQGLLGMCVGEKRKLKIPAKLGYGAQGSPPTIPGGATLIFDTELVTVNGK 449
            H  D I VHY+G L +G  FD+S++RG P+ F L S  VI GW +GL  +  G   KL IP KL YG  G  P IPG +TLIF+ EL+ +  K
Sbjct:  162 HDSDVITVHYKGSLINGNEFDNSYKRGQPLSFSLDS--VIPGWIEGLKYIKKGGLIKLVIPPKLAYGETG-VPGIPGNSTLIFEIELIDIQSK 251          
BLAST of FC929318 vs. ExPASy Swiss-Prot
Match: FKBP5_MOUSE (FK506-binding protein 5 OS=Mus musculus GN=Fkbp5 PE=1 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 3.630e-15
Identity = 42/91 (46.15%), Postives = 52/91 (57.14%), Query Frame = 3
Query:  177 GDKIKVHYRGKLTDGTVFDSSFERGDPIEFELGSGHVIKGWDQGLLGMCVGEKRKLKIPAKLGYGAQGSPPTIPGGATLIFDTELVTVNGK 449
            GDK+ VHY+G L+DG  FDSS +R  P  F LG G VIK WD G+  M  GE   L    +  YG+ G    IP  ATL F+ EL+   G+
Sbjct:   50 GDKVYVHYKGMLSDGKKFDSSHDRKKPFAFSLGQGQVIKAWDIGVSTMKKGEICHLLCKPEYAYGSAGHLQKIPSNATLFFEIELLDFKGE 140          
BLAST of FC929318 vs. ExPASy Swiss-Prot
Match: FKBP3_KLULA (FK506-binding protein 3 OS=Kluyveromyces lactis GN=FPR3 PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 3.630e-15
Identity = 46/99 (46.46%), Postives = 59/99 (59.60%), Query Frame = 3
Query:  144 KPKTCDIQAHKGDKIKVHYRGKLTDGTVFDSSFERGDPIEFELGSGHVIKGWDQGLLGMCVGEKRKLKIPAKLGYGAQGSPPTIPGGATLIFDTELVTV 440
            K K C     KG K+ + Y GKL +G VFD +   G P  F LG G VIKGWD G+ GM VG +R++ IPA   YG Q + P IP  + L FD +LV++
Sbjct:  325 KGKACK----KGSKVGMRYIGKLKNGKVFDKNTS-GKPFVFNLGRGEVIKGWDIGVAGMAVGGERRIVIPAPYAYGKQ-ALPGIPANSELTFDVKLVSL 417          
BLAST of FC929318 vs. ExPASy Swiss-Prot
Match: FKBP4_SPOFR (46 kDa FK506-binding nuclear protein OS=Spodoptera frugiperda GN=FKBP46 PE=2 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 4.741e-15
Identity = 39/91 (42.86%), Postives = 53/91 (58.24%), Query Frame = 3
Query:  168 AHKGDKIKVHYRGKLTDGTVFDSSFERGDPIEFELGSGHVIKGWDQGLLGMCVGEKRKLKIPAKLGYGAQGSPPTIPGGATLIFDTELVTV 440
            A  G  + V+Y G+L        +  +G   +F LGS  VI GWD G+ GM VG KRK+  P  + YGA+GSPP IP  +TL+F+ +L  V
Sbjct:  321 AKAGKVVMVYYEGRLKQNNKMFDNCVKGPGFKFRLGSKEVISGWDVGIAGMKVGGKRKIVCPPAMAYGAKGSPPVIPPNSTLVFEVDLKNV 411          
BLAST of FC929318 vs. ExPASy Swiss-Prot
Match: FKBP3_YEAST (FK506-binding nuclear protein OS=Saccharomyces cerevisiae GN=FPR3 PE=1 SV=2)

HSP 1 Score: 81.6481 bits (200), Expect = 4.741e-15
Identity = 43/92 (46.74%), Postives = 59/92 (64.13%), Query Frame = 3
Query:  165 QAHKGDKIKVHYRGKLTDGTVFDSSFERGDPIEFELGSGHVIKGWDQGLLGMCVGEKRKLKIPAKLGYGAQGSPPTIPGGATLIFDTELVTV 440
            QA +G ++ + Y GKL +G VFD +   G P  F+LG G VIKGWD G+ GM VG +R++ IPA   YG Q + P IP  + L FD +LV++
Sbjct:  320 QAKRGARVGMRYIGKLKNGKVFDKNTS-GKPFAFKLGRGEVIKGWDIGVAGMSVGGERRIIIPAPYAYGKQ-ALPGIPANSELTFDVKLVSM 409          
The following BLAST results are available for this feature:
BLAST of FC929318 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 130
Match NameE-valueIdentityDescription
FKBP7_PONAB5.600e-1640.88FK506-binding protein 7 OS=Pongo abelii GN=FKBP7 P... [more]
FKBP_CANAL9.552e-1643.81FK506-binding protein 1 OS=Candida albicans GN=RBP... [more]
FKBP4_YEAST1.629e-1547.25FK506-binding protein 4 OS=Saccharomyces cerevisia... [more]
FKBP4_SCHPO1.629e-1547.83FK506-binding protein 39 kDa OS=Schizosaccharomyce... [more]
FKBP3_DICDI1.629e-1541.79FK506-binding protein 3 OS=Dictyostelium discoideu... [more]
FKBA_BUCBP1.629e-1548.39FKBP-type peptidyl-prolyl cis-trans isomerase fkpA... [more]
FKBP5_MOUSE3.630e-1546.15FK506-binding protein 5 OS=Mus musculus GN=Fkbp5 P... [more]
FKBP3_KLULA3.630e-1546.46FK506-binding protein 3 OS=Kluyveromyces lactis GN... [more]
FKBP4_SPOFR4.741e-1542.8646 kDa FK506-binding nuclear protein OS=Spodoptera... [more]
FKBP3_YEAST4.741e-1546.74FK506-binding nuclear protein OS=Saccharomyces cer... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAH3DF09RM1 PhII-IIIV1 Citrus clementina cDNA clone KN0AAH3DF09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929318 ID=FC929318; Name=FC929318; organism=Citrus clementina; type=EST; length=740bp
GACAAACAGAGAGAATTGTGAAGATGAGTTTCAACTCAGTATTGAATATC
GCCGCTGCAATTTCGTTCCTTTTGGTTCTTTCGACGTTAGTTTCTGCTAA
CAAGTCAGGCGATGTAACAGAGTTACAGATTGGCGTAAAGTACAAGCCAA
AAACCTGTGACATTCAGGCTCACAAAGGTGATAAAATCAAAGTACATTAC
CGGGGAAAACTGACTGATGGAACTGTTTTTGATTCCAGTTTTGAAAGAGG
TGATCCCATTGAATTTGAGCTTGGCAGCGGTCATGTAATCAAAGGATGGG
ACCAAGGACTTTTGGGAATGTGCGTCGGTGAGAAGCGAAAGTTGAAAATT
CCTGCAAAGCTTGGTTATGGGGCCCAGGGTTCTCCCCCTACCATCCCAGG
TGGAGCAACATTGATCTTTGACACCGAGCTTGTAACAGTAAATGGGAAAC
CAGCAAGCGGAGAGAAAACTGAAGATGAGCTATGATTACCTCTCGATTGA
GCAGATTTACCTAAGTCATTCCTGTTGCTTTTAATGTATCGGCATAAACC
AGGTTTCATAGGCCAGAATAATTTATCTATTTAGTGACCTACAGCTGAAC
AATTTTTGTTGTTTGGATCAGAAGAAATCTTTTTAAGGGGACAAAATATT
AATCTCTGAATATTCGGAAGGTTGGTTGCCTCGCTCTTAAGTGATGCGAA
CATAGCATTATTAGATTTTTCGCAAAAAAAAAAAAAAAAA
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