FC929321

Overview
NameFC929321
Unique NameFC929321
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length823
Libraries
Library NameType
PhII-IIIV1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC929321 vs. ExPASy Swiss-Prot
Match: PPIB_HUMAN (Peptidyl-prolyl cis-trans isomerase B OS=Homo sapiens GN=PPIB PE=1 SV=2)

HSP 1 Score: 161.77 bits (408), Expect = 4.297e-39
Identity = 80/152 (52.63%), Postives = 97/152 (63.82%), Query Frame = 3
Query:  360 KVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSXFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSS 815
            KV+FD+ +G +  GR++  LF    P+T +NF AL TGEKG G       YK S FHRVI  FM Q            +SIYG  F DENF  KH GPG +SMANAG  TNGSQFF+ T KT WLDGKHVVFG+V+EGM+VV+ +E   + S
Sbjct:   45 KVYFDLRIGDEDVGRVIFGLFGKTVPKTVDNFVALATGEKGFG-------YKNSKFHRVIKDFMIQGGDFTRGDGTGGKSIYGERFPDENFKLKHYGPGWVSMANAGKDTNGSQFFITTVKTAWLDGKHVVFGKVLEGMEVVRKVESTKTDS 189          
BLAST of FC929321 vs. ExPASy Swiss-Prot
Match: PPIB_ASPOR (Peptidyl-prolyl cis-trans isomerase B OS=Aspergillus oryzae GN=cpr2 PE=3 SV=1)

HSP 1 Score: 161.77 bits (408), Expect = 4.297e-39
Identity = 82/152 (53.95%), Postives = 100/152 (65.79%), Query Frame = 3
Query:  363 VFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSXFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSG 818
            V+FD+  G +P GR+V+ L+    P+TAENFRAL TGEKG G       Y+GS+FHRVI  FM Q            +SIYG  F DENF  +HT  G+LSMANAG  TNGSQFF+ T  T WLDG+HVVFG+V+EG +VV+AIE V    G
Sbjct:   22 VYFDIEHGNKPLGRVVLGLYGKTVPKTAENFRALATGEKGFG-------YEGSTFHRVIKEFMIQGGDFTRGDGTGGKSIYGEKFKDENFKIRHTKKGLLSMANAGKDTNGSQFFITTVATPWLDGRHVVFGEVLEGYEVVEAIENVPKVPG 166          
BLAST of FC929321 vs. ExPASy Swiss-Prot
Match: PPIB_EMENI (Peptidyl-prolyl cis-trans isomerase B OS=Emericella nidulans GN=cpr2 PE=3 SV=1)

HSP 1 Score: 160.999 bits (406), Expect = 7.329e-39
Identity = 85/161 (52.80%), Postives = 103/161 (63.98%), Query Frame = 3
Query:  333 INQSKMPNPK----VFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSXFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKV 803
            +N S+   PK    V+FD+  G +  GRIV+ L+    P TAENFRAL TGEKG G       Y+GS+FHRVI  FM Q            +SIYG+ F DENF  +HT  G+LSMANAG  TNGSQFF+ TA T WLDGKHVVFG+V+EG D+V  I+ V
Sbjct:   22 VNASEPRGPKITNKVYFDIQHGDESLGRIVLGLYGKTVPETAENFRALATGEKGFG-------YEGSNFHRVIKDFMIQGGDFTRGDGTGGKSIYGAKFKDENFKLRHTKTGLLSMANAGKDTNGSQFFITTAVTPWLDGKHVVFGEVLEGYDIVDKIQNV 175          
BLAST of FC929321 vs. ExPASy Swiss-Prot
Match: PPIB_SCHMA (Peptidyl-prolyl cis-trans isomerase B OS=Schistosoma mansoni GN=CYP PE=2 SV=1)

HSP 1 Score: 160.614 bits (405), Expect = 9.572e-39
Identity = 82/152 (53.95%), Postives = 98/152 (64.47%), Query Frame = 3
Query:  360 KVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSXFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSS 815
            KVFFD+ V G+P  RI++ LF    P+T ENF+ L  G +   K G+   YKGS+FHRVI  FM Q             SIYG  F DENF  +H G G LSMANAGP TNGSQFF+ T KT WLDGKHVVFG+VVEGM++V+ IE   + S
Sbjct:   33 KVFFDIEVDGKPLARIIIGLFGKTVPKTVENFKQLSIGTQL--KDGRTASYKGSTFHRVIKSFMIQGGDFTNHDGTGGFSIYGDRFPDENFKLRHVGAGWLSMANAGPDTNGSQFFITTVKTSWLDGKHVVFGKVVEGMNIVRQIESETTDS 182          
BLAST of FC929321 vs. ExPASy Swiss-Prot
Match: PPIA_PARPR (Peptidyl-prolyl cis-trans isomerase OS=Paramecium primaurelia PE=3 SV=1)

HSP 1 Score: 159.073 bits (401), Expect = 2.785e-38
Identity = 81/153 (52.94%), Postives = 95/153 (62.09%), Query Frame = 3
Query:  363 VFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSXFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGK 821
            VFFD+  GG    +IV +L+ DV P+TA NFR L TG +G G       YKGS FHRVI  FM Q            +SIYG  FADENF  KHT P +LSMANAGP TNGSQFF+      WLDGKHVVFG+VV+G D ++  +K  S  GK
Sbjct:    4 VFFDVQFGGDAPKKIVFKLYDDVVPKTAANFRELATGSRGFG-------YKGSVFHRVITDFMAQGGDFTNFNGTGGKSIYGEKFADENFKLKHTKPALLSMANAGPNTNGSQFFITFVPCPWLDGKHVVFGEVVDGFDTLELFKKNSSQQGK 149          
BLAST of FC929321 vs. ExPASy Swiss-Prot
Match: PPIC_HUMAN (Peptidyl-prolyl cis-trans isomerase C OS=Homo sapiens GN=PPIC PE=1 SV=1)

HSP 1 Score: 158.688 bits (400), Expect = 3.637e-38
Identity = 83/146 (56.85%), Postives = 94/146 (64.38%), Query Frame = 3
Query:  360 KVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSXFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIE 797
            KVFFD+ +G +  GRIV+ LF  V P+T ENF AL TGEKG G       YKGS FHRVI  FM Q             SIYG  F DENF  KH G G +SMANAGP TNGSQFF+   K  WLDGKHVVFG+V++GM VV +IE
Sbjct:   39 KVFFDVRIGDKDVGRIVIGLFGKVVPKTVENFVALATGEKGYG-------YKGSKFHRVIKDFMIQGGDITTGDGTGGVSIYGETFPDENFKLKHYGIGWVSMANAGPDTNGSQFFITLTKPTWLDGKHVVFGKVIDGMTVVHSIE 177          
BLAST of FC929321 vs. ExPASy Swiss-Prot
Match: CYP5_CAEEL (Peptidyl-prolyl cis-trans isomerase 5 OS=Caenorhabditis elegans GN=cyn-5 PE=1 SV=2)

HSP 1 Score: 158.303 bits (399), Expect = 4.750e-38
Identity = 83/153 (54.25%), Postives = 95/153 (62.09%), Query Frame = 3
Query:  360 KVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSXFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSG 818
            KV+FDM +GG+P GRIV+ LF    P+TA NF  L    KG G       Y GS FHRVI  FM Q             SIYG  FADENF  KH G G LSMANAG  TNGSQFF+ T KT WLDG+HVVFG+++EGMDVV+ IE+     G
Sbjct:   30 KVYFDMEIGGKPIGRIVIGLFGKTVPKTATNFIELAKKPKGEG-------YPGSKFHRVIADFMIQGGDFTRGDGTGGRSIYGEKFADENFKLKHYGAGWLSMANAGADTNGSQFFITTVKTPWLDGRHVVFGKILEGMDVVRKIEQTEKLPG 175          
BLAST of FC929321 vs. ExPASy Swiss-Prot
Match: PPIH_RHIOR (Peptidyl-prolyl cis-trans isomerase H OS=Rhizopus oryzae GN=cyp7 PE=3 SV=1)

HSP 1 Score: 157.918 bits (398), Expect = 6.204e-38
Identity = 79/157 (50.32%), Postives = 105/157 (66.88%), Query Frame = 3
Query:  342 SKMPNPKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSX-FADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGS 809
            +++  P VFFD+++G  P GR+ MELF+D+ PRTAENFR LCTGE    ++G P  YK   FHRVI  FM Q              IYG   FADENF++KHTG G+LSMAN+GP +NG QFF+     ++LDGKHVVFG++V+G+  ++ IE V +
Sbjct:    6 NQVERPVVFFDISIGDVPVGRMKMELFSDIVPRTAENFRQLCTGE--YKRNGVPQGYKNCLFHRVIKDFMVQGGDFIKGDGTGAMCIYGGDRFADENFIEKHTGAGLLSMANSGPNSNGCQFFITCDACDFLDGKHVVFGRLVDGLLTLRKIENVAT 160          
BLAST of FC929321 vs. ExPASy Swiss-Prot
Match: PPIC_MOUSE (Peptidyl-prolyl cis-trans isomerase C OS=Mus musculus GN=Ppic PE=1 SV=1)

HSP 1 Score: 157.918 bits (398), Expect = 6.204e-38
Identity = 83/146 (56.85%), Postives = 95/146 (65.07%), Query Frame = 3
Query:  360 KVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSXFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIE 797
            KVFFD+ +G +  GRIV+ LF +V P+T ENF AL TGEKG G       YKGS FHRVI  FM Q             SIYG  F DENF  KH G G +SMANAGP TNGSQFF+   K  WLDGKHVVFG+V++GM VV +IE
Sbjct:   39 KVFFDVRIGDKDVGRIVIGLFGNVVPKTVENFVALATGEKGYG-------YKGSIFHRVIKDFMIQGGDFTARDGTGGMSIYGETFPDENFKLKHYGIGWVSMANAGPDTNGSQFFITLTKPTWLDGKHVVFGKVLDGMTVVHSIE 177          
BLAST of FC929321 vs. ExPASy Swiss-Prot
Match: PPIB_SCHJA (Peptidyl-prolyl cis-trans isomerase B OS=Schistosoma japonicum PE=2 SV=1)

HSP 1 Score: 157.918 bits (398), Expect = 6.204e-38
Identity = 82/152 (53.95%), Postives = 96/152 (63.16%), Query Frame = 3
Query:  360 KVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSXFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSS 815
            KVFFD+ V  QP GRI++ LF    P+T ENF+ L  G     K G+   YKGS+FHRVI  FM Q             SIYG  F DENF  KH G G LSMANAGP TNG+QFF+ T +  WLDGKHVVFG+VVEGM VV+ IE + + S
Sbjct:   33 KVFFDIEVDEQPLGRIIIGLFGKTVPKTVENFKQLSIGTTL--KDGRTAAYKGSTFHRVIKSFMIQGGDFTNHDGTGGFSIYGERFPDENFKLKHVGAGWLSMANAGPNTNGAQFFITTTQNPWLDGKHVVFGKVVEGMSVVRQIENMQTDS 182          
The following BLAST results are available for this feature:
BLAST of FC929321 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 232
Match NameE-valueIdentityDescription
PPIB_HUMAN4.297e-3952.63Peptidyl-prolyl cis-trans isomerase B OS=Homo sapi... [more]
PPIB_ASPOR4.297e-3953.95Peptidyl-prolyl cis-trans isomerase B OS=Aspergill... [more]
PPIB_EMENI7.329e-3952.80Peptidyl-prolyl cis-trans isomerase B OS=Emericell... [more]
PPIB_SCHMA9.572e-3953.95Peptidyl-prolyl cis-trans isomerase B OS=Schistoso... [more]
PPIA_PARPR2.785e-3852.94Peptidyl-prolyl cis-trans isomerase OS=Paramecium ... [more]
PPIC_HUMAN3.637e-3856.85Peptidyl-prolyl cis-trans isomerase C OS=Homo sapi... [more]
CYP5_CAEEL4.750e-3854.25Peptidyl-prolyl cis-trans isomerase 5 OS=Caenorhab... [more]
PPIH_RHIOR6.204e-3850.32Peptidyl-prolyl cis-trans isomerase H OS=Rhizopus ... [more]
PPIC_MOUSE6.204e-3856.85Peptidyl-prolyl cis-trans isomerase C OS=Mus muscu... [more]
PPIB_SCHJA6.204e-3853.95Peptidyl-prolyl cis-trans isomerase B OS=Schistoso... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAH3DG01RM1 PhII-IIIV1 Citrus clementina cDNA clone KN0AAH3DG01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929321 ID=FC929321; Name=FC929321; organism=Citrus clementina; type=EST; length=823bp
GGCACGAGGTTGCTGGCGACGGCAAGGAGAATGGCCTCATTAGCAACCAC
TTCAGAGTCCAGGCGGTACTGCTGGCCTAACATGTAATGCCCCACGTAGT
CTGCACATTTTTCGGGAACAGTCGCCCATCCTATAACGTTATTAGTTTCC
ACTCCGAGTCGCCAACTCAGGCAGGACAAGCCGGGCACATCGTTGTTCCG
GGAACCGGCTTTCGGTCGGAGAAGATGAATCTGATGGGGGATGTCCATGC
TAAATCCATGGGATGTTGCTGCCTCGTGCCGAATTCGGCACGAGGATCAG
AAGTCCGTGTTTAGTTTGTTTTTTTCTCTCCAATCAACCAATCAAAAATG
CCAAACCCCAAAGTGTTCTTCGACATGACCGTCGGCGGTCAGCCCGCCGG
CAGGATCGTGATGGAGCTCTTCGCCGATGTCACCCCCCGAACCGCCGAGA
ACTTCCGCGCCCTCTGCACCGGCGAGAAAGGCATCGGCAAGTCCGGCAAG
CCACTCCACTACAAGGGCTCGTCCTTCCACCGTGTGATCCCCGGATTCAT
GTGCCAGGGGGGAGACTTCACCGCCGGAAACGGAACCGGAGGCGAATCAA
TCTACGGCTCANAATTCGCCGATGAGAACTTCGTGAAGAAGCACACCGGC
CCCGGAATCCTCTCCATGGCGAATGCCGGACCCGGAACCAACGGATCTCA
GTTCTTCGTCTGTACGGCCAAGACCGAGTGGCTCGATGGGAAGCACGTTG
TGTTCGGTCAAGTCGTCGAAGGAATGGACGTCGTCAAGGCCATCGAGAAA
GTGGGGTCAAGCTCCGGAAAGGA
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