FC929324

Overview
NameFC929324
Unique NameFC929324
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length376
Libraries
Library NameType
PhII-IIIV1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC929324 vs. ExPASy Swiss-Prot
Match: CDK2_CARAU (Cell division protein kinase 2 OS=Carassius auratus GN=cdk2 PE=2 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 1.934e-14
Identity = 38/50 (76.00%), Postives = 44/50 (88.00%), Query Frame = 1
Query:  226 YEKVEKIGEGTYGVVYKARNCVTNETISLKKIRREQEDEGVPSTAIIEIS 375
            ++KVEKIGEGTYGVVYKA+N VT ET++LKKIR + E EGVPSTAI EIS
Sbjct:    4 FQKVEKIGEGTYGVVYKAKNKVTGETVALKKIRLDTETEGVPSTAIREIS 53          
BLAST of FC929324 vs. ExPASy Swiss-Prot
Match: CDK2_HUMAN (Cell division protein kinase 2 OS=Homo sapiens GN=CDK2 PE=1 SV=2)

HSP 1 Score: 75.8702 bits (185), Expect = 7.348e-14
Identity = 37/50 (74.00%), Postives = 43/50 (86.00%), Query Frame = 1
Query:  226 YEKVEKIGEGTYGVVYKARNCVTNETISLKKIRREQEDEGVPSTAIIEIS 375
            ++KVEKIGEGTYGVVYKARN +T E ++LKKIR + E EGVPSTAI EIS
Sbjct:    4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREIS 53          
BLAST of FC929324 vs. ExPASy Swiss-Prot
Match: CDC2_DROME (Cell division control protein 2 homolog OS=Drosophila melanogaster GN=cdc2 PE=1 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 7.348e-14
Identity = 35/50 (70.00%), Postives = 43/50 (86.00%), Query Frame = 1
Query:  226 YEKVEKIGEGTYGVVYKARNCVTNETISLKKIRREQEDEGVPSTAIIEIS 375
            +EK+EKIGEGTYGVVYK RN +T + +++KKIR E +DEGVPSTAI EIS
Sbjct:    4 FEKIEKIGEGTYGVVYKGRNRLTGQIVAMKKIRLESDDEGVPSTAIREIS 53          
BLAST of FC929324 vs. ExPASy Swiss-Prot
Match: CDK2_RAT (Cell division protein kinase 2 OS=Rattus norvegicus GN=Cdk2 PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 1.637e-13
Identity = 36/50 (72.00%), Postives = 43/50 (86.00%), Query Frame = 1
Query:  226 YEKVEKIGEGTYGVVYKARNCVTNETISLKKIRREQEDEGVPSTAIIEIS 375
            ++KVEKIGEGTYGVVYKA+N +T E ++LKKIR + E EGVPSTAI EIS
Sbjct:    4 FQKVEKIGEGTYGVVYKAKNKLTGEVVALKKIRLDTETEGVPSTAIREIS 53          
BLAST of FC929324 vs. ExPASy Swiss-Prot
Match: CDK2_MOUSE (Cell division protein kinase 2 OS=Mus musculus GN=Cdk2 PE=1 SV=2)

HSP 1 Score: 74.7146 bits (182), Expect = 1.637e-13
Identity = 36/50 (72.00%), Postives = 43/50 (86.00%), Query Frame = 1
Query:  226 YEKVEKIGEGTYGVVYKARNCVTNETISLKKIRREQEDEGVPSTAIIEIS 375
            ++KVEKIGEGTYGVVYKA+N +T E ++LKKIR + E EGVPSTAI EIS
Sbjct:    4 FQKVEKIGEGTYGVVYKAKNKLTGEVVALKKIRLDTETEGVPSTAIREIS 53          
BLAST of FC929324 vs. ExPASy Swiss-Prot
Match: CDK2_MESAU (Cell division protein kinase 2 OS=Mesocricetus auratus GN=CDK2 PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 1.637e-13
Identity = 36/50 (72.00%), Postives = 43/50 (86.00%), Query Frame = 1
Query:  226 YEKVEKIGEGTYGVVYKARNCVTNETISLKKIRREQEDEGVPSTAIIEIS 375
            ++KVEKIGEGTYGVVYKA+N +T E ++LKKIR + E EGVPSTAI EIS
Sbjct:    4 FQKVEKIGEGTYGVVYKAKNKLTGEVVALKKIRLDTETEGVPSTAIREIS 53          
BLAST of FC929324 vs. ExPASy Swiss-Prot
Match: CDK2_CRIGR (Cell division protein kinase 2 OS=Cricetulus griseus GN=CDK2 PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 1.637e-13
Identity = 36/50 (72.00%), Postives = 43/50 (86.00%), Query Frame = 1
Query:  226 YEKVEKIGEGTYGVVYKARNCVTNETISLKKIRREQEDEGVPSTAIIEIS 375
            ++KVEKIGEGTYGVVYKA+N +T E ++LKKIR + E EGVPSTAI EIS
Sbjct:    4 FQKVEKIGEGTYGVVYKAKNKLTGEVVALKKIRLDTETEGVPSTAIREIS 53          
BLAST of FC929324 vs. ExPASy Swiss-Prot
Match: CDK2_BOVIN (Cell division protein kinase 2 OS=Bos taurus GN=CDK2 PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 1.637e-13
Identity = 36/50 (72.00%), Postives = 43/50 (86.00%), Query Frame = 1
Query:  226 YEKVEKIGEGTYGVVYKARNCVTNETISLKKIRREQEDEGVPSTAIIEIS 375
            ++KVEKIGEGTYGVVYKA+N +T E ++LKKIR + E EGVPSTAI EIS
Sbjct:    4 FQKVEKIGEGTYGVVYKAKNKLTGEVVALKKIRLDTETEGVPSTAIREIS 53          
BLAST of FC929324 vs. ExPASy Swiss-Prot
Match: CDK5_DICDI (Cell division protein kinase 5 homolog OS=Dictyostelium discoideum GN=cdk5 PE=2 SV=2)

HSP 1 Score: 74.3294 bits (181), Expect = 2.138e-13
Identity = 34/51 (66.67%), Postives = 42/51 (82.35%), Query Frame = 1
Query:  223 KYEKVEKIGEGTYGVVYKARNCVTNETISLKKIRREQEDEGVPSTAIIEIS 375
            KY K+EK+GEGTYG+VYKA+N  T E ++LK+IR + EDEGVP TAI EIS
Sbjct:    3 KYSKIEKLGEGTYGIVYKAKNRETGEIVALKRIRLDSEDEGVPCTAIREIS 53          
BLAST of FC929324 vs. ExPASy Swiss-Prot
Match: CDK3_MOUSE (Cell division protein kinase 3 OS=Mus musculus GN=Cdk3 PE=1 SV=2)

HSP 1 Score: 74.3294 bits (181), Expect = 2.138e-13
Identity = 36/50 (72.00%), Postives = 43/50 (86.00%), Query Frame = 1
Query:  226 YEKVEKIGEGTYGVVYKARNCVTNETISLKKIRREQEDEGVPSTAIIEIS 375
            ++KVEKIGEGTYGVVYKARN VT + ++LKKIR + E EGVPSTA+ EIS
Sbjct:    4 FQKVEKIGEGTYGVVYKARNKVTGQLVALKKIRLDLEAEGVPSTAVREIS 53          
The following BLAST results are available for this feature:
BLAST of FC929324 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 67
Match NameE-valueIdentityDescription
CDK2_CARAU1.934e-1476.00Cell division protein kinase 2 OS=Carassius auratu... [more]
CDK2_HUMAN7.348e-1474.00Cell division protein kinase 2 OS=Homo sapiens GN=... [more]
CDC2_DROME7.348e-1470.00Cell division control protein 2 homolog OS=Drosoph... [more]
CDK2_RAT1.637e-1372.00Cell division protein kinase 2 OS=Rattus norvegicu... [more]
CDK2_MOUSE1.637e-1372.00Cell division protein kinase 2 OS=Mus musculus GN=... [more]
CDK2_MESAU1.637e-1372.00Cell division protein kinase 2 OS=Mesocricetus aur... [more]
CDK2_CRIGR1.637e-1372.00Cell division protein kinase 2 OS=Cricetulus grise... [more]
CDK2_BOVIN1.637e-1372.00Cell division protein kinase 2 OS=Bos taurus GN=CD... [more]
CDK5_DICDI2.138e-1366.67Cell division protein kinase 5 homolog OS=Dictyost... [more]
CDK3_MOUSE2.138e-1372.00Cell division protein kinase 3 OS=Mus musculus GN=... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAH3DG04RM1 PhII-IIIV1 Citrus clementina cDNA clone KN0AAH3DG04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929324 ID=FC929324; Name=FC929324; organism=Citrus clementina; type=EST; length=376bp
GGCACGAGGCTAAAACTCACTTCTTTCACCGCCGCCGCTGCCTCCAATCA
CCTCACTCTTACTCCGGCGATCTCCCCCGTCGGCTTGGATCGTCCTCGCG
TCTGTTACTGTATTATGCATTTGTATTTTTCTCTTTCGTAAGCGGTTAAT
TTTTTCTTCATAACACACTGCCGCCACCTACGCCGTCGATTCGTGCCGTT
CTTGTCGCCGTCCGTCGGTAGCAAGTATGAAAAGGTTGAGAAGATTGGTG
AAGGAACCTATGGAGTAGTTTACAAGGCCCGTAATTGTGTCACGAATGAG
ACAATATCATTGAAGAAGATCCGCCGTGAGCAGGAAGATGAAGGTGTGCC
TAGCACCGCGATTATAGAAATTTCCC
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