FC929324

Overview
NameFC929324
Unique NameFC929324
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length376
Libraries
Library NameType
PhII-IIIV1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC929324 vs. ExPASy Swiss-Prot
Match: CDK2_XENLA (Cell division protein kinase 2 OS=Xenopus laevis GN=cdk2 PE=1 SV=3)

HSP 1 Score: 74.3294 bits (181), Expect = 2.138e-13
Identity = 37/50 (74.00%), Postives = 42/50 (84.00%), Query Frame = 1
Query:  226 YEKVEKIGEGTYGVVYKARNCVTNETISLKKIRREQEDEGVPSTAIIEIS 375
            ++KVEKIGEGTYGVVYKARN  T E ++LKKIR + E EGVPSTAI EIS
Sbjct:    4 FQKVEKIGEGTYGVVYKARNRETGEIVALKKIRLDTETEGVPSTAIREIS 53          
BLAST of FC929324 vs. ExPASy Swiss-Prot
Match: CDC2_CARAU (Cell division control protein 2 homolog OS=Carassius auratus GN=cdc2 PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 3.647e-13
Identity = 34/50 (68.00%), Postives = 41/50 (82.00%), Query Frame = 1
Query:  226 YEKVEKIGEGTYGVVYKARNCVTNETISLKKIRREQEDEGVPSTAIIEIS 375
            Y K+EKIGEGTYGVVYK RN  T + +++KKIR E E+EGVPSTA+ EIS
Sbjct:    4 YLKIEKIGEGTYGVVYKGRNKTTGQVVAMKKIRLESEEEGVPSTAVREIS 53          
BLAST of FC929324 vs. ExPASy Swiss-Prot
Match: CDC2_MOUSE (Cell division control protein 2 homolog OS=Mus musculus GN=Cdc2 PE=1 SV=3)

HSP 1 Score: 73.1738 bits (178), Expect = 4.763e-13
Identity = 35/50 (70.00%), Postives = 42/50 (84.00%), Query Frame = 1
Query:  226 YEKVEKIGEGTYGVVYKARNCVTNETISLKKIRREQEDEGVPSTAIIEIS 375
            Y K+EKIGEGTYGVVYK R+ VT + +++KKIR E E+EGVPSTAI EIS
Sbjct:    4 YIKIEKIGEGTYGVVYKGRHRVTGQIVAMKKIRLESEEEGVPSTAIREIS 53          
BLAST of FC929324 vs. ExPASy Swiss-Prot
Match: CDC2B_XENLA (Cell division control protein 2-B OS=Xenopus laevis GN=cdc2-B PE=1 SV=2)

HSP 1 Score: 73.1738 bits (178), Expect = 4.763e-13
Identity = 34/51 (66.67%), Postives = 42/51 (82.35%), Query Frame = 1
Query:  223 KYEKVEKIGEGTYGVVYKARNCVTNETISLKKIRREQEDEGVPSTAIIEIS 375
            +Y K+EKIGEGTYGVVYK R+  T + +++KKIR E E+EGVPSTAI EIS
Sbjct:    3 EYTKIEKIGEGTYGVVYKGRHKATGQVVAMKKIRLENEEEGVPSTAIREIS 53          
BLAST of FC929324 vs. ExPASy Swiss-Prot
Match: CDC2A_XENLA (Cell division control protein 2-A OS=Xenopus laevis GN=cdc2-A PE=1 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 4.763e-13
Identity = 34/51 (66.67%), Postives = 42/51 (82.35%), Query Frame = 1
Query:  223 KYEKVEKIGEGTYGVVYKARNCVTNETISLKKIRREQEDEGVPSTAIIEIS 375
            +Y K+EKIGEGTYGVVYK R+  T + +++KKIR E E+EGVPSTAI EIS
Sbjct:    3 EYTKIEKIGEGTYGVVYKGRHKATGQVVAMKKIRLENEEEGVPSTAIREIS 53          
BLAST of FC929324 vs. ExPASy Swiss-Prot
Match: CDC2_SCHPO (Cell division control protein 2 OS=Schizosaccharomyces pombe GN=cdc2 PE=1 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 6.221e-13
Identity = 35/50 (70.00%), Postives = 42/50 (84.00%), Query Frame = 1
Query:  226 YEKVEKIGEGTYGVVYKARNCVTNETISLKKIRREQEDEGVPSTAIIEIS 375
            Y+KVEKIGEGTYGVVYKAR+ ++   +++KKIR E E EGVPSTAI EIS
Sbjct:    4 YQKVEKIGEGTYGVVYKARHKLSGRIVAMKKIRLEDESEGVPSTAIREIS 53          
BLAST of FC929324 vs. ExPASy Swiss-Prot
Match: CDC2_PONAB (Cell division control protein 2 homolog OS=Pongo abelii GN=CDC2 PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 6.221e-13
Identity = 34/50 (68.00%), Postives = 41/50 (82.00%), Query Frame = 1
Query:  226 YEKVEKIGEGTYGVVYKARNCVTNETISLKKIRREQEDEGVPSTAIIEIS 375
            Y K+EKIGEGTYGVVYK R+  T + +++KKIR E E+EGVPSTAI EIS
Sbjct:    4 YTKIEKIGEGTYGVVYKGRHKTTGQVVTMKKIRLESEEEGVPSTAIREIS 53          
BLAST of FC929324 vs. ExPASy Swiss-Prot
Match: CDC2_HUMAN (Cell division control protein 2 homolog OS=Homo sapiens GN=CDC2 PE=1 SV=2)

HSP 1 Score: 72.7886 bits (177), Expect = 6.221e-13
Identity = 34/50 (68.00%), Postives = 41/50 (82.00%), Query Frame = 1
Query:  226 YEKVEKIGEGTYGVVYKARNCVTNETISLKKIRREQEDEGVPSTAIIEIS 375
            Y K+EKIGEGTYGVVYK R+  T + +++KKIR E E+EGVPSTAI EIS
Sbjct:    4 YTKIEKIGEGTYGVVYKGRHKTTGQVVAMKKIRLESEEEGVPSTAIREIS 53          
BLAST of FC929324 vs. ExPASy Swiss-Prot
Match: CDC2_CHICK (Cell division control protein 2 homolog OS=Gallus gallus GN=CDC2 PE=1 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 6.221e-13
Identity = 34/50 (68.00%), Postives = 41/50 (82.00%), Query Frame = 1
Query:  226 YEKVEKIGEGTYGVVYKARNCVTNETISLKKIRREQEDEGVPSTAIIEIS 375
            Y K+EKIGEGTYGVVYK R+  T + +++KKIR E E+EGVPSTAI EIS
Sbjct:    4 YTKIEKIGEGTYGVVYKGRHKTTGQVVAMKKIRLESEEEGVPSTAIREIS 53          
BLAST of FC929324 vs. ExPASy Swiss-Prot
Match: CDC2_BOVIN (Cell division control protein 2 homolog OS=Bos taurus GN=CDC2 PE=2 SV=2)

HSP 1 Score: 72.7886 bits (177), Expect = 6.221e-13
Identity = 34/50 (68.00%), Postives = 41/50 (82.00%), Query Frame = 1
Query:  226 YEKVEKIGEGTYGVVYKARNCVTNETISLKKIRREQEDEGVPSTAIIEIS 375
            Y K+EKIGEGTYGVVYK R+  T + +++KKIR E E+EGVPSTAI EIS
Sbjct:    4 YTKIEKIGEGTYGVVYKGRHKTTGQVVAMKKIRLESEEEGVPSTAIREIS 53          
The following BLAST results are available for this feature:
BLAST of FC929324 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 67
Match NameE-valueIdentityDescription
CDK2_XENLA2.138e-1374.00Cell division protein kinase 2 OS=Xenopus laevis G... [more]
CDC2_CARAU3.647e-1368.00Cell division control protein 2 homolog OS=Carassi... [more]
CDC2_MOUSE4.763e-1370.00Cell division control protein 2 homolog OS=Mus mus... [more]
CDC2B_XENLA4.763e-1366.67Cell division control protein 2-B OS=Xenopus laevi... [more]
CDC2A_XENLA4.763e-1366.67Cell division control protein 2-A OS=Xenopus laevi... [more]
CDC2_SCHPO6.221e-1370.00Cell division control protein 2 OS=Schizosaccharom... [more]
CDC2_PONAB6.221e-1368.00Cell division control protein 2 homolog OS=Pongo a... [more]
CDC2_HUMAN6.221e-1368.00Cell division control protein 2 homolog OS=Homo sa... [more]
CDC2_CHICK6.221e-1368.00Cell division control protein 2 homolog OS=Gallus ... [more]
CDC2_BOVIN6.221e-1368.00Cell division control protein 2 homolog OS=Bos tau... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAH3DG04RM1 PhII-IIIV1 Citrus clementina cDNA clone KN0AAH3DG04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929324 ID=FC929324; Name=FC929324; organism=Citrus clementina; type=EST; length=376bp
GGCACGAGGCTAAAACTCACTTCTTTCACCGCCGCCGCTGCCTCCAATCA
CCTCACTCTTACTCCGGCGATCTCCCCCGTCGGCTTGGATCGTCCTCGCG
TCTGTTACTGTATTATGCATTTGTATTTTTCTCTTTCGTAAGCGGTTAAT
TTTTTCTTCATAACACACTGCCGCCACCTACGCCGTCGATTCGTGCCGTT
CTTGTCGCCGTCCGTCGGTAGCAAGTATGAAAAGGTTGAGAAGATTGGTG
AAGGAACCTATGGAGTAGTTTACAAGGCCCGTAATTGTGTCACGAATGAG
ACAATATCATTGAAGAAGATCCGCCGTGAGCAGGAAGATGAAGGTGTGCC
TAGCACCGCGATTATAGAAATTTCCC
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