FC929360

Overview
NameFC929360
Unique NameFC929360
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length812
Libraries
Library NameType
PhII-IIIV1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC929360 vs. ExPASy Swiss-Prot
Match: AQPZ_BRAJA (Aquaporin Z OS=Bradyrhizobium japonicum GN=aqpZ PE=3 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 4.235e-23
Identity = 66/198 (33.33%), Postives = 97/198 (48.99%), Query Frame = 1
Query:  211 GVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAI-------------SGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWLFWVGPFIGAAI 765
            G+G++G++ AFG  +  + Y    ISG H+NPAVT GL    +    + + Y++AQ  GAI              G  + K F  + Y  +  G       YS       E++ T + ++ +  AT  +  A        APL IG A+ M+HL +IP+T T +NPARS G A ++    A    WLFWV P IG A+
Sbjct:   34 GIGLVGVSLAFGLSVVTMAYAIGHISGCHLNPAVTVGLAAGGRFPAGQILPYVIAQVCGAIVAAELLYIIASGAPGFDVTKGFASNGYDAHSPGQ------YSMMACFLTEVVMTMMFLFIIMGATHGRAPAG------FAPLAIGLALVMIHLVSIPVTNTSVNPARSTGPA-LFVGGWAMAQLWLFWVAPLIGGAL 218          
BLAST of FC929360 vs. ExPASy Swiss-Prot
Match: TIP32_ORYSJ (Probable aquaporin TIP3-2 OS=Oryza sativa subsp. japonica GN=TIP3-2 PE=2 SV=2)

HSP 1 Score: 105.145 bits (261), Expect = 4.682e-22
Identity = 78/232 (33.62%), Postives = 113/232 (48.71%), Query Frame = 1
Query:   97 RALIAEFIAXXXXXXXXXXXXIG-YKSQTDPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTG------VGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVI-YNKDKAWDDQWLFWVGPFIGAAIA 768
            RA ++EF+A             G +K   D      G  G G+L +A A    +   V  +   SGGH+NPAVTFG+ + R++S  RA +Y  AQ LGA+  V L++           GG   +  G++ G        L  E++ TF LVYTV++    +RS        +APL IG       LA  P  G  +NPAR+ G A++ +N    W   W++W+GP IGA +A
Sbjct:   29 RAALSEFVATAVFVFAAEGSVYGLWKMYRDT-----GTLG-GLLVVAVAHALALAAAVAVSRNASGGHVNPAVTFGVLVGRRISFARAALYWAAQLLGAVLAVLLLRL--------ASGGMRPM--GFTLGHRIHERHALLLEVVMTFGLVYTVYATAVDRRSGGGD----IAPLAIGLVAGANILAGGPFDGAAMNPARAFGPALVGWN----WRHHWVYWLGPLIGAGMA 236          
BLAST of FC929360 vs. ExPASy Swiss-Prot
Match: AQPZ_SHIFL (Aquaporin Z OS=Shigella flexneri GN=aqpZ PE=3 SV=2)

HSP 1 Score: 104.375 bits (259), Expect = 7.986e-22
Identity = 65/194 (33.51%), Postives = 93/194 (47.94%), Query Frame = 1
Query:  211 GVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELAD---------GYSTGVGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWLFWVGPFIGAAI 765
            G+G  G+A AFG  +  + +    ISGGH NPAVT GL+   +      V Y++AQ +G I    L+     S  T +   A+  A          GYS    L  E++ +   +  +  ATD    A        AP+ IG A+ ++HL +IP+T T +NPARS  A  I+    A +  W FWV P +G  I
Sbjct:   33 GIGFAGVALAFGLTVLTMAFAVGHISGGHFNPAVTIGLWAGGRFPAKEVVGYVIAQVVGGIVAAALLYLI-ASGKTGFDAAASGFASNGYGEHSPGGYSMLSALVVELVLSAGFLLVIHGATDKFAPAG------FAPIAIGLALTLIHLISIPVTNTSVNPARST-AVAIFQGGWALEQLWFFWVVPIVGGII 218          
BLAST of FC929360 vs. ExPASy Swiss-Prot
Match: AQPZ_ECOLI (Aquaporin Z OS=Escherichia coli (strain K12) GN=aqpZ PE=1 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 7.986e-22
Identity = 65/194 (33.51%), Postives = 93/194 (47.94%), Query Frame = 1
Query:  211 GVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELAD---------GYSTGVGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWLFWVGPFIGAAI 765
            G+G  G+A AFG  +  + +    ISGGH NPAVT GL+   +      V Y++AQ +G I    L+     S  T +   A+  A          GYS    L  E++ +   +  +  ATD    A        AP+ IG A+ ++HL +IP+T T +NPARS  A  I+    A +  W FWV P +G  I
Sbjct:   33 GIGFAGVALAFGLTVLTMAFAVGHISGGHFNPAVTIGLWAGGRFPAKEVVGYVIAQVVGGIVAAALLYLI-ASGKTGFDAAASGFASNGYGEHSPGGYSMLSALVVELVLSAGFLLVIHGATDKFAPAG------FAPIAIGLALTLIHLISIPVTNTSVNPARST-AVAIFQGGWALEQLWFFWVVPIVGGII 218          
BLAST of FC929360 vs. ExPASy Swiss-Prot
Match: AQPZ_ECOL6 (Aquaporin Z OS=Escherichia coli O6 GN=aqpZ PE=3 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 7.986e-22
Identity = 65/194 (33.51%), Postives = 93/194 (47.94%), Query Frame = 1
Query:  211 GVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELAD---------GYSTGVGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWLFWVGPFIGAAI 765
            G+G  G+A AFG  +  + +    ISGGH NPAVT GL+   +      V Y++AQ +G I    L+     S  T +   A+  A          GYS    L  E++ +   +  +  ATD    A        AP+ IG A+ ++HL +IP+T T +NPARS  A  I+    A +  W FWV P +G  I
Sbjct:   33 GIGFAGVALAFGLTVLTMAFAVGHISGGHFNPAVTIGLWAGGRFPAKEVVGYVIAQVVGGIVAAALLYLI-ASGKTGFDAAASGFASNGYGEHSPGGYSMLSALVVELVLSAGFLLVIHGATDKFAPAG------FAPIAIGLALTLIHLISIPVTNTSVNPARST-AVAIFQGGWALEQLWFFWVVPIVGGII 218          
BLAST of FC929360 vs. ExPASy Swiss-Prot
Match: AQPZ_ECO57 (Aquaporin Z OS=Escherichia coli O157:H7 GN=aqpZ PE=3 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 7.986e-22
Identity = 65/194 (33.51%), Postives = 93/194 (47.94%), Query Frame = 1
Query:  211 GVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELAD---------GYSTGVGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWLFWVGPFIGAAI 765
            G+G  G+A AFG  +  + +    ISGGH NPAVT GL+   +      V Y++AQ +G I    L+     S  T +   A+  A          GYS    L  E++ +   +  +  ATD    A        AP+ IG A+ ++HL +IP+T T +NPARS  A  I+    A +  W FWV P +G  I
Sbjct:   33 GIGFAGVALAFGLTVLTMAFAVGHISGGHFNPAVTIGLWAGGRFPAKEVVGYVIAQVVGGIVAAALLYLI-ASGKTGFDAAASGFASNGYGEHSPGGYSMLSALVVELVLSAGFLLVIHGATDKFAPAG------FAPIAIGLALTLIHLISIPVTNTSVNPARST-AVAIFQGGWALEQLWFFWVVPIVGGII 218          
BLAST of FC929360 vs. ExPASy Swiss-Prot
Match: AQP6_HUMAN (Aquaporin-6 OS=Homo sapiens GN=AQP6 PE=2 SV=2)

HSP 1 Score: 103.99 bits (258), Expect = 1.043e-21
Identity = 68/188 (36.17%), Postives = 96/188 (51.06%), Query Frame = 1
Query:  220 ILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWLFWVGPFIGAAIAAFYPN 783
            +L IA  F  +  + V  T   SG H NPAVT    +   +SL RAV Y+ AQ +GA  G  L+         R   G N + +  STG  +A E++ T  LV  VF++TD ++++            IG +V + HL  I  TG  +NPARS G A+I  K   +   W+FWVGP +GA +A+   N
Sbjct:   55 VLQIAITFNLVTAMAVQVTWKASGAHANPAVTLAFLVGSHISLPRAVAYVAAQLVGATVGAALLYGVMPG-DIRETLGINVVRNSVSTGQAVAVELLLTLQLVLCVFASTDSRQTSGS------PATMIGISVALGHLIGIHFTGCSMNPARSFGPAIIIGK---FTVHWVFWVGPLMGALLASLIYN 232          
BLAST of FC929360 vs. ExPASy Swiss-Prot
Match: TIP44_MAIZE (Aquaporin TIP4-4 OS=Zea mays GN=TIP4-4 PE=2 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 3.035e-21
Identity = 74/225 (32.89%), Postives = 109/225 (48.44%), Query Frame = 1
Query:   97 RALIAEFIAXXXXXXXXXXXXIGYKSQTDPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVLVYTVF-SATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWLFWVGPFIGAAIA 768
            RA++AE I             +G    T       G   VG+  +A A   ++ V+V     +SGGHINPAVT GL    +++L R+ +Y+ AQ LG+     L+ AF        G   + L  G     G+  E + TF L++ V+ +  DP+R+     V  + PL +G  V    LA  P +G  +NPARS G A++      W D W++WVGP IG  +A
Sbjct:   19 RAVLAELILTFLFVFAG----VGSAMATGKLAGGGGDTVVGLTAVALAHTLVVAVMVSAGLHVSGGHINPAVTLGLAATGRITLFRSALYVAAQLLGSTLAC-LLLAFLA--VADSGVPVHALGAGVGALRGVLMEAVLTFSLLFAVYATVVDPRRA-----VGGMGPLLVGLVVGANVLAGGPFSGASMNPARSFGPALVAG---VWADHWVYWVGPLIGGPLA 228          
BLAST of FC929360 vs. ExPASy Swiss-Prot
Match: AQPA_DICDI (Aquaporin A OS=Dictyostelium discoideum GN=aqpA PE=2 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 1.153e-20
Identity = 63/198 (31.82%), Postives = 101/198 (51.01%), Query Frame = 1
Query:  205 CAGVGILGIAWA---FGGMI-----FVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWLFWVGPFIGAAIAAF 774
            CA   + G + A    GG+I       L++  +G+SG ++NPAVT    L+ +V L+ ++ Y+ AQ LG I+G G++     + Y R   G   LA G +TG     E++ T +L   V   +    +  D  +  +AP  IG A+F+        +G  +NP R LG ++I      W   W++W+GP +GA +AAF
Sbjct:   56 CAAFAVAGDSAARALLGGLIQGMALAALIWAVSGVSGCNLNPAVTLANLLSGRVGLIDSLYYVAAQILGCIAGAGILYGCLPNMY-RIDLGVPHLAPGMNTGQAFLMEMMLTSILCLCVLGTS--VFNVWDRRLNRIAPFAIGLALFIGVAIGFNFSGGALNPVRVLGPSII---SGVWSHHWVYWLGPIVGAILAAF 247          
BLAST of FC929360 vs. ExPASy Swiss-Prot
Match: BIB_DROME (Neurogenic protein big brain OS=Drosophila melanogaster GN=bib PE=1 SV=2)

HSP 1 Score: 100.138 bits (248), Expect = 1.506e-20
Identity = 80/258 (31.01%), Postives = 110/258 (42.64%), Query Frame = 1
Query:    1 GTRHGSYSAKDYTDPPPEPLFDAVELTKWSFYRALIAEFIAXXXXXXXXXXXXIGYKSQTDPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAA------EIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWLFWVGPFIG 756
            G  HG  +    T   P+    A E+    F+R++I+E +A             G          V       +L  A A G  +  L  C   ISG HINPAVT  L + R +S +RA MY+ AQC G I+G  L+      Y     G    L    S    LAA      E I TF++V   F +TDP +    +     +   IG A       ++P     +NPARSLG + + NK   WD  W++W GP +G
Sbjct:   35 GGGHGVNNRLSSTLQAPKRSMQA-EIRTLEFWRSIISECLASFMYVFIVCGAAAGV--------GVGASVSSVLLATALASGLAMATLTQCFLHISGAHINPAVTLALCVVRSISPIRAAMYITAQCGGGIAGAALL------YGVTVPGYQGNLQAAISHSAALAAWERFGVEFILTFLVVLCYFVSTDPMKKFMGN-----SAASIGCAYSACCFVSMPY----LNPARSLGPSFVLNK---WDSHWVYWFGPLVG 265          
The following BLAST results are available for this feature:
BLAST of FC929360 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 194
Match NameE-valueIdentityDescription
AQPZ_BRAJA4.235e-2333.33Aquaporin Z OS=Bradyrhizobium japonicum GN=aqpZ PE... [more]
TIP32_ORYSJ4.682e-2233.62Probable aquaporin TIP3-2 OS=Oryza sativa subsp. j... [more]
AQPZ_SHIFL7.986e-2233.51Aquaporin Z OS=Shigella flexneri GN=aqpZ PE=3 SV=2[more]
AQPZ_ECOLI7.986e-2233.51Aquaporin Z OS=Escherichia coli (strain K12) GN=aq... [more]
AQPZ_ECOL67.986e-2233.51Aquaporin Z OS=Escherichia coli O6 GN=aqpZ PE=3 SV... [more]
AQPZ_ECO577.986e-2233.51Aquaporin Z OS=Escherichia coli O157:H7 GN=aqpZ PE... [more]
AQP6_HUMAN1.043e-2136.17Aquaporin-6 OS=Homo sapiens GN=AQP6 PE=2 SV=2[more]
TIP44_MAIZE3.035e-2132.89Aquaporin TIP4-4 OS=Zea mays GN=TIP4-4 PE=2 SV=1[more]
AQPA_DICDI1.153e-2031.82Aquaporin A OS=Dictyostelium discoideum GN=aqpA PE... [more]
BIB_DROME1.506e-2031.01Neurogenic protein big brain OS=Drosophila melanog... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAH2BB07RM1 PhII-IIIV1 Citrus clementina cDNA clone KN0AAH2BB07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929360 ID=FC929360; Name=FC929360; organism=Citrus clementina; type=EST; length=812bp
GGCACGAGGCACGGCTCATATTCAGCCAAGGACTACACGGACCCACCGCC
GGAGCCGCTATTCGACGCCGTGGAGCTGACCAAATGGTCATTCTACAGAG
CCTTGATAGCTGAGTTCATAGCAACCCTGCTCTTTCTTTACGTCACTGTC
TTGACTGTCATTGGCTACAAAAGCCAGACCGATCCCGCCAAGAACGTCGA
CGGCTGTGCCGGCGTCGGCATCCTCGGCATCGCCTGGGCCTTCGGTGGCA
TGATCTTTGTCCTCGTTTACTGCACCGCCGGTATCTCAGGTGGTCACATT
AACCCGGCAGTGACGTTCGGACTATTCTTGGCCCGCAAGGTGTCGTTGGT
CCGTGCTGTGATGTACATGGTGGCGCAGTGCCTTGGTGCTATCTCCGGTG
TTGGGTTGGTCAAGGCTTTCCAAAAATCTTACTACACAAGGTACGGAGGT
GGGGCCAACGAGCTGGCCGATGGGTACAGCACCGGCGTTGGATTGGCCGC
CGAGATCATCGGCACCTTTGTCTTGGTTTACACTGTCTTCTCGGCCACTG
ATCCCAAGAGAAGCGCCAGAGACTCCCACGTTCCCGTTTTGGCACCGCTC
CCCATTGGATTTGCTGTGTTCATGGTACACTTGGCCACAATCCCAATCAC
TGGCACTGGCATTAACCCAGCAAGGAGTCTCGGGGCCGCTGTTATTTACA
ACAAGGACAAGGCTTGGGATGATCAATGGCTCTTCTGGGTTGGACCCTTC
ATTGGTGCAGCAATTGCAGCTTTCTACCCCAATTCATCTTGAGAGCTGGA
GCTGTCAAGGCT
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