FC929364

Overview
NameFC929364
Unique NameFC929364
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length803
Libraries
Library NameType
PhII-IIIV1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC929364 vs. ExPASy Swiss-Prot
Match: SPKA_DICDI (Stress-activated protein kinase alpha OS=Dictyostelium discoideum GN=spkA-1 PE=1 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 5.436e-15
Identity = 59/232 (25.43%), Postives = 107/232 (46.12%), Query Frame = 3
Query:    3 EFLNEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALFGGENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEEEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHRSGTLMELVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSML 698
            EF  E  ++S ++  ++V  +G  +E  +L +V E     SL H +   +N+ L + W    +  +   RG+  LH+     IVHRD+K+ N+L++     K+ DFGL++ +         ++ GT  Y APE       + K+DVYS  V+  E+V+   N  Y    +    L   F +     +++     L         E ++ +   C + +   RPT ++++S L
Sbjct:  391 EFKKEFQIMSAIRSKHVVHFYGAVLE-PKLCMVMENCSRGSLYHVM---DNNSLDIGWERTFRFAIETVRGIECLHKWDP-PIVHRDLKSLNLLVNDKWEIKVCDFGLSRFNTGSNLETLVKMRGTFAYCAPEVYYGEQFSGKSDVYSIAVILWELVTRCINGRYERPFSEYKNLQHDFQI-----IIQTAKKNLRPTIPNACPESLVSLIQDCWDPNLENRPTCTDILSRL 612          
BLAST of FC929364 vs. ExPASy Swiss-Prot
Match: SHKE_DICDI (Dual specificity protein kinase shkE OS=Dictyostelium discoideum GN=shkE PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 5.436e-15
Identity = 52/158 (32.91%), Postives = 84/158 (53.16%), Query Frame = 3
Query:    6 FLNEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALFGGENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEEEKTHISTR-VAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVS 476
            F NE+ ++  + HPN+V   G C +  ++++V E M+ + L   +   E     L    R K+CL  A G+ +LH      I+HRD+K  N+++ +D   KI DFG +++ +   T    +   GT  YMAPE  +      KADVYSFG++  E+ +
Sbjct:  279 FKNEVEIMKQIFHPNVVLCLGACTKPGKVMIVSELMQTD-LEKLIHSSEVEPPPLY--ERMKMCLDAALGINWLH--GICNIIHRDLKLANLMISKDKTVKIGDFGFSQVIKTGTTLSDQKGPKGTALYMAPEVMMKHEFNEKADVYSFGLILYEMAT 431          
BLAST of FC929364 vs. ExPASy Swiss-Prot
Match: RIPK2_MOUSE (Receptor-interacting serine/threonine-protein kinase 2 OS=Mus musculus GN=Ripk2 PE=2 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 5.436e-15
Identity = 63/199 (31.66%), Postives = 99/199 (49.75%), Query Frame = 3
Query:    3 EFLNEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALFGGENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLD----EEEKTHISTRVAGTIGYMAPEYALWGY---LTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHL---HRSGTLME 569
            + L E  ++   +   ++ I G C E + L +V EYM N SL + L   +     + WP+R +I   IA G+ +LH  +   ++H D+K  N+LLD + + KI+DFGL+K       + +++ S    GTI YM PE    G     + K D+YS+ V+  E++S K      P    T PL   + +   HR  T  E
Sbjct:   62 DILREAEILHKARFSYILPILGICNEPEFLGIVTEYMPNGSL-NELLHRKTEYPDIAWPLRFRILHEIALGVNYLHNMNP-PLLHHDLKTQNILLDNEFHVKIADFGLSKWRMMSLSQSRSYKSAPEGGTIIYMPPENYEPGQKSRASVKHDIYSYAVIMWEVLSRKQ-----PFEEVTNPLQIMYSVSQGHRPDTSEE 253          
BLAST of FC929364 vs. ExPASy Swiss-Prot
Match: MATK_HUMAN (Megakaryocyte-associated tyrosine-protein kinase OS=Homo sapiens GN=MATK PE=1 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 5.436e-15
Identity = 56/157 (35.67%), Postives = 89/157 (56.69%), Query Frame = 3
Query:    6 FLNEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALFGGENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEEEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVS 476
            FL+E A+++ +QH NLV++ G  +    L +V E++   +L + L      +  +N     +  L +A G+ +L  +   K+VHRD+ A N+L+  DL  K+SDFGLAK   E K   S+R+   + + APE    G  T K+DV+SFGV+  E+ S
Sbjct:  273 FLDETAVMTKMQHENLVRLLGVILH-QGLYIVMEHVSKGNLVNFL--RTRGRALVNTAQLLQFSLHVAEGMEYLESK---KLVHRDLAARNILVSEDLVAKVSDFGLAK--AERKGLDSSRL--PVKWTAPEALKHGKFTSKSDVWSFGVLLWEVFS 419          
BLAST of FC929364 vs. ExPASy Swiss-Prot
Match: IRAK2_RAT (Interleukin-1 receptor-associated kinase-like 2 OS=Rattus norvegicus GN=Irak2 PE=2 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 5.436e-15
Identity = 49/155 (31.61%), Postives = 79/155 (50.97%), Query Frame = 3
Query:   33 CLQ--HPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALFGGENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEEEKTHISTR----VAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSG 479
            CL+  HPN++ + G C       L+Y YM N SL   L+   +S + L+WP R  IC G+   +  LH      I+H ++K+ NVLLD+ LNPK++          +KT  +         +  Y+   +   G LT + D++S G+V  E+++G
Sbjct:  261 CLRCCHPNILPLLGFCTGRQFHSLIYPYMANGSLQDRLWAQGDSDM-LSWPQRASICSGLLLAVEHLHS---LDIIHSNVKSANVLLDQHLNPKLAHPVAHPCPTNKKTKYTVMKTHLFQASAAYLPENFIRVGQLTKQVDIFSCGIVLAEVLTG 411          
BLAST of FC929364 vs. ExPASy Swiss-Prot
Match: FPS_DROME (Tyrosine-protein kinase Fps85D OS=Drosophila melanogaster GN=Fps85D PE=1 SV=3)

HSP 1 Score: 81.6481 bits (200), Expect = 5.436e-15
Identity = 65/234 (27.78%), Postives = 109/234 (46.58%), Query Frame = 3
Query:    3 EFLNEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALFGGENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEEEKTHISTRVAG-TIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHRSGTLMELVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLE 701
            +FL E  ++    HPN+VK+ G CV+   +++V E +   SL   L    N    L    +  +C   A G+ +L  ++    +HRD+ A N L+D + + KISDFG+++  EEE+  +S  +    + + APE   +G  T   DV+S+G++  EI S K +  Y   +N                  E +D        K   E M ++ L C  A    RP   E+ ++++
Sbjct: 1105 KFLQEGRILKQYDHPNIVKLIGICVQKQPIMIVMELVLGGSLLTYLRKNSNG---LTTRQQMGMCRDAAAGMRYLESKN---CIHRDLAARNCLVDLEHSVKISDFGMSR--EEEEYIVSDGMKQIPVKWTAPEALNFGKYTSLCDVWSYGILMWEIFS-KGDTPYSGMTN--------------SRARERIDTGYRMPTPKSTPEEMYRLMLQCWAADAESRPHFDEIYNVVD 1315          
BLAST of FC929364 vs. ExPASy Swiss-Prot
Match: CLA4_ASHGO (Serine/threonine-protein kinase CLA4 OS=Ashbya gossypii GN=CLA4 PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 5.436e-15
Identity = 56/162 (34.57%), Postives = 85/162 (52.47%), Query Frame = 3
Query:    9 LNEIAMISCLQHPNLVK-IHGCCVEGDQLLLVYEYMENNSLAHAL---FGGENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEEEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGK 482
            +NEI ++   QH N+V  +       D L +V EYME  SL   +    G + S+  +  P    I     +GL FLH++    I+HRDIK+ NVLLD     KI+DFG      ++++  +T V GT  +MAPE         K DV+S G++ +E++ G+
Sbjct:  559 VNEILVMKDSQHKNIVNFLEAYLKTEDDLWVVMEYMEGGSLTDVIENSIGSDASESPMTEPQIAYIVRETCQGLKFLHDKH---IIHRDIKSDNVLLDTHGRVKITDFGFCAKLTDKRSKRATMV-GTPYWMAPEVVKQREYDEKVDVWSLGIMTIEMLEGE 716          
BLAST of FC929364 vs. ExPASy Swiss-Prot
Match: Y4251_DICDI (Probable serine/threonine-protein kinase DDB_G0284251 OS=Dictyostelium discoideum GN=DDB_G0284251 PE=3 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 7.100e-15
Identity = 53/162 (32.72%), Postives = 92/162 (56.79%), Query Frame = 3
Query:   15 EIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHAL--FGGENSQLKLNWPVRQKICL----GIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLA-KLDEEEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSG 479
            E+ ++  L+H N+VK+ G      QL  + EY+EN SL   +  FG          P+ +++C+     + +GLA+LH     K++HRDIKA+N+L+ ++   K++DFG+A ++D E +   S  V GT  +MAPE       +  +D++S G   +E+++G
Sbjct:   83 EVEILHKLRHNNIVKVLGVVEVQAQLNFILEYVENGSLRDVIEKFG----------PLSEELCIIYLYQMLQGLAYLHSN---KVIHRDIKASNILITKEGVIKLADFGVASQIDSESQLRFS--VVGTPYWMAPESIEISGCSSASDIWSLGSTMIELLTG 229          
BLAST of FC929364 vs. ExPASy Swiss-Prot
Match: RIPK3_HUMAN (Receptor-interacting serine/threonine-protein kinase 3 OS=Homo sapiens GN=RIPK3 PE=1 SV=2)

HSP 1 Score: 81.2629 bits (199), Expect = 7.100e-15
Identity = 68/223 (30.49%), Postives = 115/223 (51.57%), Query Frame = 3
Query:   96 LVYEYMENNSLAHALFGGENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEEEKTHI-STRVAGTIGYMAPEYALWGYLTYKA----DVYSFGVVALEIVSGK-----NNMSYVPDSNCTCPLDWAFHLHRSGTLMELVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTM-------SEVVSMLEGSSN 713
            LV ++MEN SL+  L     SQ    WP+  ++   +  G+ +LH+++   ++HRD+K +NVLLD +L+ K++DFGL+      ++   S    GT+GY+APE  L+  +  KA    DVYSFG++   +++G+        S V ++ C        +     +L EL  P+ G E   +E   + ++  LC ++ P  RP+         EV  M+E + N
Sbjct:   92 LVTKFMENGSLSGLL----QSQCPRPWPLLCRLLKEVVLGMFYLHDQNPV-LLHRDLKPSNVLLDPELHVKLADFGLSTFQGGSQSGTGSGEPGGTLGYLAPE--LFVNVNRKASTASDVYSFGILMWAVLAGREVELPTEPSLVYEAVC--------NRQNRPSLAEL--PQAGPETPGLEG--LKELMQLCWSSEPKDRPSFQECLPKTDEVFQMVENNMN 295          
BLAST of FC929364 vs. ExPASy Swiss-Prot
Match: NTRK2_RAT (BDNF/NT-3 growth factors receptor OS=Rattus norvegicus GN=Ntrk2 PE=1 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 7.100e-15
Identity = 54/166 (32.53%), Postives = 85/166 (51.20%), Query Frame = 3
Query:    3 EFLNEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSL-----AH----ALFGGENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAK-LDEEEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEI 470
            +F  E  +++ LQH ++VK +G CVEGD L++V+EYM++  L     AH     L    N   +L       I   IA G+ +L  +     VHRD+   N L+  +L  KI DFG+++ +   +   +       I +M PE  ++   T ++DV+S GVV  EI
Sbjct:  583 DFHREAELLTNLQHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQ---HFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEI 745          
The following BLAST results are available for this feature:
BLAST of FC929364 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
SPKA_DICDI5.436e-1525.43Stress-activated protein kinase alpha OS=Dictyoste... [more]
SHKE_DICDI5.436e-1532.91Dual specificity protein kinase shkE OS=Dictyostel... [more]
RIPK2_MOUSE5.436e-1531.66Receptor-interacting serine/threonine-protein kina... [more]
MATK_HUMAN5.436e-1535.67Megakaryocyte-associated tyrosine-protein kinase O... [more]
IRAK2_RAT5.436e-1531.61Interleukin-1 receptor-associated kinase-like 2 OS... [more]
FPS_DROME5.436e-1527.78Tyrosine-protein kinase Fps85D OS=Drosophila melan... [more]
CLA4_ASHGO5.436e-1534.57Serine/threonine-protein kinase CLA4 OS=Ashbya gos... [more]
Y4251_DICDI7.100e-1532.72Probable serine/threonine-protein kinase DDB_G0284... [more]
RIPK3_HUMAN7.100e-1530.49Receptor-interacting serine/threonine-protein kina... [more]
NTRK2_RAT7.100e-1532.53BDNF/NT-3 growth factors receptor OS=Rattus norveg... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAH2BB12RM1 PhII-IIIV1 Citrus clementina cDNA clone KN0AAH2BB12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929364 ID=FC929364; Name=FC929364; organism=Citrus clementina; type=EST; length=803bp
GTGAATTCTTAAATGAGATAGCCATGATTTCGTGTTTGCAACACCCAAAT
CTTGTTAAAATTCATGGCTGTTGTGTTGAAGGGGATCAACTCTTGCTAGT
ATATGAATACATGGAAAACAACAGCCTTGCCCATGCTTTATTCGGTGGCG
AAAACAGTCAACTGAAATTGAACTGGCCAGTGAGGCAGAAGATCTGCCTT
GGGATAGCCAGAGGTTTAGCTTTTCTACATGAAGAATCCAGATTCAAAAT
AGTTCATAGAGACATCAAAGCTACGAATGTTCTGCTAGATAGAGATTTAA
ACCCCAAAATATCTGACTTTGGACTGGCTAAGCTTGATGAGGAGGAAAAA
ACTCACATCAGTACTCGAGTTGCTGGAACAATAGGATATATGGCACCAGA
GTACGCTCTATGGGGTTACTTGACCTACAAAGCAGATGTTTACAGTTTCG
GAGTTGTGGCTTTGGAAATCGTCAGTGGGAAGAATAATATGAGTTATGTG
CCAGACAGTAATTGCACCTGTCCTCTTGACTGGGCCTTCCATTTACACCG
AAGTGGTACGTTAATGGAGTTAGTGGATCCAAGGCTCGGATCAGAATTCA
ACAAGGTTGAAGCAGAGAGAATGATTAAAATAGCACTCTTATGCACCAAT
GCGTCACCTTCACTAAGGCCAACCATGTCTGAAGTGGTAAGCATGCTGGA
AGGATCTTCTAACATTCCGGATGTAATCCCTGAAGCCGGTGGTTTGAGTG
AAGACTTGAGGTTTAAAACTCTAAGAGACCATCCAAGAGAAATGAATATT
TCG
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