FC929364

Overview
NameFC929364
Unique NameFC929364
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length803
Libraries
Library NameType
PhII-IIIV1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig9285 contig Ccv1_Contig9285:2..804. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC929364 vs. ExPASy Swiss-Prot
Match: EPHA4_HUMAN (Ephrin type-A receptor 4 OS=Homo sapiens GN=EPHA4 PE=1 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 2.066e-14
Identity = 51/162 (31.48%), Postives = 91/162 (56.17%), Query Frame = 3
Query:    3 EFLNEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHAL--FGGENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEEEKTHISTRVAG--TIGYMAPEYALWGYLTYKADVYSFGVVALEIVS 476
            +FL+E +++    HPN++ + G   +   ++++ EYMEN SL   L    G  + ++L   +R     GI  G+ +L + S    VHRD+ A N+L++ +L  K+SDFG++++ E++     T   G   I + APE   +   T  +DV+S+G+V  E++S
Sbjct:  666 DFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLR-----GIGSGMKYLSDMS---YVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMS 819          
BLAST of FC929364 vs. ExPASy Swiss-Prot
Match: EPHA4_CHICK (Ephrin type-A receptor 4 OS=Gallus gallus GN=EPHA4 PE=2 SV=2)

HSP 1 Score: 79.7221 bits (195), Expect = 2.066e-14
Identity = 51/162 (31.48%), Postives = 91/162 (56.17%), Query Frame = 3
Query:    3 EFLNEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHAL--FGGENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEEEKTHISTRVAG--TIGYMAPEYALWGYLTYKADVYSFGVVALEIVS 476
            +FL+E +++    HPN++ + G   +   ++++ EYMEN SL   L    G  + ++L   +R     GI  G+ +L + S    VHRD+ A N+L++ +L  K+SDFG++++ E++     T   G   I + APE   +   T  +DV+S+G+V  E++S
Sbjct:  666 DFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLR-----GIGSGMKYLSDMS---YVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMS 819          
BLAST of FC929364 vs. ExPASy Swiss-Prot
Match: EPA4B_XENLA (Ephrin type-A receptor 4-B OS=Xenopus laevis GN=epha4-B PE=2 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 2.066e-14
Identity = 51/162 (31.48%), Postives = 91/162 (56.17%), Query Frame = 3
Query:    3 EFLNEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHAL--FGGENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEEEKTHISTRVAG--TIGYMAPEYALWGYLTYKADVYSFGVVALEIVS 476
            +FL+E +++    HPN++ + G   +   ++++ EYMEN SL   L    G  + ++L   +R     GI  G+ +L + S    VHRD+ A N+L++ +L  K+SDFG++++ E++     T   G   I + APE   +   T  +DV+S+G+V  E++S
Sbjct:  665 DFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLR-----GIGSGMKYLSDMS---YVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMS 818          
BLAST of FC929364 vs. ExPASy Swiss-Prot
Match: Y9847_DICDI (Probable serine/threonine-protein kinase DDB_G0267686 OS=Dictyostelium discoideum GN=DDB_G0267686 PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.698e-14
Identity = 59/232 (25.43%), Postives = 109/232 (46.98%), Query Frame = 3
Query:    3 EFLNEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALFGGENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEEEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHRSGTLMELVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSML 698
            +FL E+ ++S L+ P++V  +G  ++  ++ ++ EY  N +L H +    + Q+   W    K  + + RG+  LH      IVHRD+K+ N+L+  +   K++DFGL++     K+  +    GT  Y APE   +G  T K D++S G++  E+        Y    +    + + F +     L++     L     +   E    +   C  +SP  RP+  E++  L
Sbjct: 1989 DFLKELEIMSSLRSPHVVYFYGMVLD-PKICMIMEYCSNQTLYHLM----HLQMNFTWDWVFKFAIEMVRGVNCLHSWKPV-IVHRDLKSLNLLVSDNWTIKVADFGLSRF-ATAKSASNRTTRGTFAYCAPE-VFYGIHTTKGDIFSIGIILWELAVRCIKSKYEKPFSEFKHIQYDFQI-----LVQTSKFNLRPTIPQNCPEAFSNLISNCWESSPDNRPSCPEILDSL 2207          
BLAST of FC929364 vs. ExPASy Swiss-Prot
Match: TXK_HUMAN (Tyrosine-protein kinase TXK OS=Homo sapiens GN=TXK PE=1 SV=3)

HSP 1 Score: 79.337 bits (194), Expect = 2.698e-14
Identity = 63/233 (27.04%), Postives = 108/233 (46.35%), Query Frame = 3
Query:    3 EFLNEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALFGGENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAK--LDEEEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTC--PLDWAFHLHRSGTLMELVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVV 689
            +F+ E  ++  L H  LV+++G C++   L +V E+MEN  L + L     ++ KL   +   +C  I  G+ +L        +HRD+ A N L+      KISDFG+ +  LD+E  +    +    I +  PE  L+   + K+DV+SFGV+  E+ + +  M +   SN      +   F L+R         P L           + ++   C +  P  RPT +E++
Sbjct:  310 DFIEEAKVMMKLSHSKLVQLYGVCIQRKPLYIVTEFMENGCLLNYL---RENKGKLRKEMLLSVCQDICEGMEYLERNG---YIHRDLAARNCLVSSTCIVKISDFGMTRYVLDDEYVSSFGAKFP--IKWSPPEVFLFNKYSSKSDVWSFGVLMWEVFT-EGKMPFENKSNLQVVEAISEGFRLYR---------PHLA-------PMSIYEVMYSCWHEKPEGRPTFAELL 517          
BLAST of FC929364 vs. ExPASy Swiss-Prot
Match: STK25_BOVIN (Serine/threonine-protein kinase 25 OS=Bos taurus GN=STK25 PE=2 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.698e-14
Identity = 63/225 (28.00%), Postives = 105/225 (46.67%), Query Frame = 3
Query:   15 EIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALFGGENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEEEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHRSGTLMELVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVV 689
            EI ++S    P + +  G  ++  +L ++ EY+   S    L  G   +  +   +R+     I +GL +LH E +   +HRDIKA NVLL    + K++DFG+A    + +   +T V GT  +MAPE        +KAD++S G+ A+E+  G+      P ++   P+   F + ++        P L    +K   E        C N  P  RPT  E++
Sbjct:   66 EITVLSQCDSPYITRYFGSYLKSTKLWIIMEYLGGGSALDLLKPGPLEETYIATILRE-----ILKGLDYLHSERK---IHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFV-GTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGE------PPNSDLHPMRVLFLIPKNS------PPTLEGHHSKPFKE----FVEACLNKDPRFRPTAKELL 265          
BLAST of FC929364 vs. ExPASy Swiss-Prot
Match: STE20_EMENI (Serine/threonine-protein kinase ste20 OS=Emericella nidulans GN=ste20 PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.698e-14
Identity = 51/158 (32.28%), Postives = 80/158 (50.63%), Query Frame = 3
Query:    9 LNEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALFGGENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEEEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGK 482
            +NEI ++   +H N+V      + G  L +V EYME  SL   +     S+     P    +C     GL  LH +    ++HRDIK+ N+LL  D N K++DFG      + +   +T V GT  +MAPE         K D++S G++A+E++ G+
Sbjct:  610 INEILVMKDSKHKNIVNFLDSYLHGLDLWVVMEYMEGGSLTDVVTFNIMSE-----PQIAAVCRETLNGLQHLHSKG---VIHRDIKSDNILLSLDGNIKLTDFGFCAQINDSQNKRNTMV-GTPYWMAPEVVTRKEYGRKVDIWSLGIMAIEMIEGE 758          
BLAST of FC929364 vs. ExPASy Swiss-Prot
Match: STE20_CANAL (Serine/threonine-protein kinase CST20 OS=Candida albicans GN=CST20 PE=3 SV=2)

HSP 1 Score: 79.337 bits (194), Expect = 2.698e-14
Identity = 54/160 (33.75%), Postives = 89/160 (55.62%), Query Frame = 3
Query:    9 LNEIAMISCLQHPNLVK-IHGCCVEGDQLLLVYEYMENNSLAHALFGGENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGL-AKLDEEEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGK 482
            +NEI ++    HPN+V  I    ++GD L ++ EYME  SL   +     ++ ++       +C    +GL FLH +    ++HRDIK+ N+LL+ D N KI+DFG  A+++E     I+  + GT  +MAPE         K DV+S G++ +E++ G+
Sbjct:  995 INEILVMKGSSHPNIVNFIDSYLLKGD-LWVIMEYMEGGSLTDIVTHSVMTEGQIG-----VVCRETLKGLKFLHSKG---VIHRDIKSDNILLNMDGNIKITDFGFCAQINEINSKRIT--MVGTPYWMAPEIVSRKEYGPKVDVWSLGIMIIEMLEGE 1143          
BLAST of FC929364 vs. ExPASy Swiss-Prot
Match: ROCO5_DICDI (Probable serine/threonine-protein kinase roco5 OS=Dictyostelium discoideum GN=roco5 PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.698e-14
Identity = 56/168 (33.33%), Postives = 86/168 (51.19%), Query Frame = 3
Query:    3 EFLNEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALFGGENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNP----KISDFGLAKLDEEEKTHISTRVAGTIG-----YMAPEYALWGYLTYKADVYSFGVVALEIVSG 479
            EF  E+ + + L HP++V + G C+  D   +V EY+ N +L   L     S   + W ++ KI + IA  +  +H  +  KI HRD+K+ N+L+  D+N     K+SDFG       E   + T   G        +++PE       T KADVYSFG+V  EI++G
Sbjct: 2220 EFRREVWLSNTLTHPSIVSLKGYCL--DPCCIVMEYIPNGTLYSHL---RKSFSSITWQLKLKIAINIADAIKHMHGFTP-KICHRDLKSPNILMLSDMNAAVVCKVSDFG-------ETRAVVTSALGRDKLSNPIWLSPEIMRGDEYTEKADVYSFGIVLWEILTG 2374          
BLAST of FC929364 vs. ExPASy Swiss-Prot
Match: RMIL_AVII1 (Serine/threonine-protein kinase-transforming protein Rmil OS=Avian retrovirus IC10 GN=V-RMIL PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.698e-14
Identity = 67/241 (27.80%), Postives = 119/241 (49.38%), Query Frame = 3
Query:    6 FLNEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALFGGENS--QLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEE-EKTHISTRVAGTIGYMAPEYALW---GYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHRSGTLMELVDPRLGSEFNKVEA---ERMIKIALLCTNASPSLRPTMSEVVSMLE 701
            F NE+ ++   +H N++   G   +  QL +V ++ E +SL H L   E     +KL    RQ      A+G+ +LH +S   I+HRD+K+ N+ L  DL  KI DFGLA +      +H   +++G+I +MAPE          ++++DVY+FG+V  E+++G+     +P SN           +R   +  +    L  + +KV +   + M ++   C       RP   ++++ +E
Sbjct:  108 FKNEVGVLRKTRHVNILLFMGYSTK-PQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQT-----AQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ-----LPYSNIN---------NRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIE 325          
The following BLAST results are available for this feature:
BLAST of FC929364 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
EPHA4_HUMAN2.066e-1431.48Ephrin type-A receptor 4 OS=Homo sapiens GN=EPHA4 ... [more]
EPHA4_CHICK2.066e-1431.48Ephrin type-A receptor 4 OS=Gallus gallus GN=EPHA4... [more]
EPA4B_XENLA2.066e-1431.48Ephrin type-A receptor 4-B OS=Xenopus laevis GN=ep... [more]
Y9847_DICDI2.698e-1425.43Probable serine/threonine-protein kinase DDB_G0267... [more]
TXK_HUMAN2.698e-1427.04Tyrosine-protein kinase TXK OS=Homo sapiens GN=TXK... [more]
STK25_BOVIN2.698e-1428.00Serine/threonine-protein kinase 25 OS=Bos taurus G... [more]
STE20_EMENI2.698e-1432.28Serine/threonine-protein kinase ste20 OS=Emericell... [more]
STE20_CANAL2.698e-1433.75Serine/threonine-protein kinase CST20 OS=Candida a... [more]
ROCO5_DICDI2.698e-1433.33Probable serine/threonine-protein kinase roco5 OS=... [more]
RMIL_AVII12.698e-1427.80Serine/threonine-protein kinase-transforming prote... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAH2BB12RM1 PhII-IIIV1 Citrus clementina cDNA clone KN0AAH2BB12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929364 ID=FC929364; Name=FC929364; organism=Citrus clementina; type=EST; length=803bp
GTGAATTCTTAAATGAGATAGCCATGATTTCGTGTTTGCAACACCCAAAT
CTTGTTAAAATTCATGGCTGTTGTGTTGAAGGGGATCAACTCTTGCTAGT
ATATGAATACATGGAAAACAACAGCCTTGCCCATGCTTTATTCGGTGGCG
AAAACAGTCAACTGAAATTGAACTGGCCAGTGAGGCAGAAGATCTGCCTT
GGGATAGCCAGAGGTTTAGCTTTTCTACATGAAGAATCCAGATTCAAAAT
AGTTCATAGAGACATCAAAGCTACGAATGTTCTGCTAGATAGAGATTTAA
ACCCCAAAATATCTGACTTTGGACTGGCTAAGCTTGATGAGGAGGAAAAA
ACTCACATCAGTACTCGAGTTGCTGGAACAATAGGATATATGGCACCAGA
GTACGCTCTATGGGGTTACTTGACCTACAAAGCAGATGTTTACAGTTTCG
GAGTTGTGGCTTTGGAAATCGTCAGTGGGAAGAATAATATGAGTTATGTG
CCAGACAGTAATTGCACCTGTCCTCTTGACTGGGCCTTCCATTTACACCG
AAGTGGTACGTTAATGGAGTTAGTGGATCCAAGGCTCGGATCAGAATTCA
ACAAGGTTGAAGCAGAGAGAATGATTAAAATAGCACTCTTATGCACCAAT
GCGTCACCTTCACTAAGGCCAACCATGTCTGAAGTGGTAAGCATGCTGGA
AGGATCTTCTAACATTCCGGATGTAATCCCTGAAGCCGGTGGTTTGAGTG
AAGACTTGAGGTTTAAAACTCTAAGAGACCATCCAAGAGAAATGAATATT
TCG
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