FC929364

Overview
NameFC929364
Unique NameFC929364
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length803
Libraries
Library NameType
PhII-IIIV1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig9285 contig Ccv1_Contig9285:2..804. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC929364 vs. ExPASy Swiss-Prot
Match: EXS_ARATH (Leucine-rich repeat receptor protein kinase EXS OS=Arabidopsis thaliana GN=EXS PE=1 SV=1)

HSP 1 Score: 182.956 bits (463), Expect = 1.733e-45
Identity = 103/236 (43.64%), Postives = 141/236 (59.75%), Query Frame = 3
Query:    3 EFLNEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALFGGENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEEEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPD---SNCTCPLDWAFHLHRSGTLMELVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLE 701
            EF+ E+  +  ++HPNLV + G C   ++ LLVYEYM N SL H L         L+W  R KI +G ARGLAFLH      I+HRDIKA+N+LLD D  PK++DFGLA+L    ++H+ST +AGT GY+ PEY      T K DVYSFGV+ LE+V+GK      PD   S     + WA      G  ++++DP L S   K    R+++IA+LC   +P+ RP M +V+  L+
Sbjct:  957 EFMAEMETLGKVKHPNLVSLLGYCSFSEEKLLVYEYMVNGSLDHWLRNQTGMLEVLDWSKRLKIAVGAARGLAFLHHGFIPHIIHRDIKASNILLDGDFEPKVADFGLARLISACESHVSTVIAGTFGYIPPEYGQSARATTKGDVYSFGVILLELVTGKEPTG--PDFKESEGGNLVGWAIQKINQGKAVDVIDPLLVSVALKNSQLRLLQIAMLCLAETPAKRPNMLDVLKALK 1190          
BLAST of FC929364 vs. ExPASy Swiss-Prot
Match: Y5457_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g45780 OS=Arabidopsis thaliana GN=At5g45780 PE=2 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 3.860e-45
Identity = 95/235 (40.43%), Postives = 138/235 (58.72%), Query Frame = 3
Query:    3 EFLNEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALFGGENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEEEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDS-NCTCPLDWAFHLHRSGTLMELVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLEG 704
            +F  E+ MI    H NL+++ G C+  ++ +LVY YM N S+A  L      +  L+W  R  I LG ARGL +LHE+   KI+HRD+KA N+LLD      + DFGLAKL ++  +H++T V GTIG++APEY   G  + K DV+ FGV+ LE+++G   +            L W   L       E+VD  L  EF+ +  E ++++ALLCT   P+LRP MS+V+ +LEG
Sbjct:  340 QFQTEVEMIGLAVHRNLLRLFGFCMTPEERMLVYPYMPNGSVADRLRDNYGEKPSLDWNRRISIALGAARGLVYLHEQCNPKIIHRDVKAANILLDESFEAIVGDFGLAKLLDQRDSHVTTAVRGTIGHIAPEYLSTGQSSEKTDVFGFGVLILELITGHKMIDQGNGQVRKGMILSWVRTLKAEKRFAEMVDRDLKGEFDDLVLEEVVELALLCTQPHPNLRPRMSQVLKVLEG 574          
BLAST of FC929364 vs. ExPASy Swiss-Prot
Match: BIK1_ARATH (Serine/threonine-protein kinase BIK1 OS=Arabidopsis thaliana GN=BIK1 PE=1 SV=1)

HSP 1 Score: 181.415 bits (459), Expect = 5.041e-45
Identity = 103/235 (43.83%), Postives = 147/235 (62.55%), Query Frame = 3
Query:    3 EFLNEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALFGGENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEE-EKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAF-HLHRSGTLMELVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLE 701
            E+L EI  +  L HPNLVK+ G C+E +  LLVYE+M+  SL + LF        L W +R  + L  A+GLAFLH +   K+++RDIKA+N+LLD D N K+SDFGLA+     + +++STRV GT GY APEY   G+L  ++DVYSFGV+ LEI+SGK  + +   +     +DWA  +L     ++ +VD RL +++   EA RM  +A+ C +  P  RPTM +VV  L+
Sbjct:  117 EWLTEINYLGQLSHPNLVKLIGYCLEDEHRLLVYEFMQKGSLENHLFRRGAYFKPLPWFLRVNVALDAAKGLAFLHSDP-VKVIYRDIKASNILLDADYNAKLSDFGLARDGPMGDLSYVSTRVMGTYGYAAPEYMSSGHLNARSDVYSFGVLLLEILSGKRALDHNRPAKEENLVDWARPYLTSKRKVLLIVDNRLDTQYLPEEAVRMASVAVQCLSFEPKSRPTMDQVVRALQ 350          
BLAST of FC929364 vs. ExPASy Swiss-Prot
Match: NAK_ARATH (Probable serine/threonine-protein kinase NAK OS=Arabidopsis thaliana GN=NAK PE=2 SV=2)

HSP 1 Score: 180.644 bits (457), Expect = 8.599e-45
Identity = 101/235 (42.98%), Postives = 147/235 (62.55%), Query Frame = 3
Query:    3 EFLNEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALFGGENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDE-EEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAF-HLHRSGTLMELVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLE 701
            E+L EI  +  L HPNLVK+ G C+E +  LLVYE+M   SL + LF        L+W  R ++ LG ARGLAFLH  ++ ++++RD KA+N+LLD + N K+SDFGLA+     + +H+STRV GT GY APEY   G+L+ K+DVYSFGVV LE++SG+  +           +DWA  +L     L+ ++DPRL  +++   A ++  +AL C +     RPTM+E+V  +E
Sbjct:  118 EWLAEINYLGQLDHPNLVKLIGYCLEEEHRLLVYEFMTRGSLENHLFRRGTFYQPLSWNTRVRMALGAARGLAFLH-NAQPQVIYRDFKASNILLDSNYNAKLSDFGLARDGPMGDNSHVSTRVMGTQGYAAPEYLATGHLSVKSDVYSFGVVLLELLSGRRAIDKNQPVGEHNLVDWARPYLTNKRRLLRVMDPRLQGQYSLTRALKIAVLALDCISIDAKSRPTMNEIVKTME 351          
BLAST of FC929364 vs. ExPASy Swiss-Prot
Match: SRF8_ARATH (Protein STRUBBELIG-RECEPTOR FAMILY 8 OS=Arabidopsis thaliana GN=SRF8 PE=2 SV=1)

HSP 1 Score: 178.718 bits (452), Expect = 3.268e-44
Identity = 96/232 (41.38%), Postives = 131/232 (56.47%), Query Frame = 3
Query:    6 FLNEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALFGGENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEEEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAF-HLHRSGTLMELVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSML 698
            FL  ++ +S L+HPN+V + G C E  Q LLVYEY+ N +L   L   ++  + L W  R K+ LG A+ L +LHE     IVHR+ K+ N+LLD +LNP +SD GLA L    +  +ST+V G+ GY APE+AL G  T K+DVY+FGVV LE+++G+  +           + WA   LH    L ++VDP L   +      R   I  LC    P  RP MSEVV  L
Sbjct:  438 FLEAVSNMSRLRHPNIVPLAGYCTEHGQRLLVYEYVGNGNLDDTLHTNDDRSMNLTWNARVKVALGTAKALEYLHEVCLPSIVHRNFKSANILLDEELNPHLSDSGLAALTPNTERQVSTQVVGSFGYSAPEFALSGIYTVKSDVYTFGVVMLELLTGRKPLDSSRTRAEQSLVRWATPQLHDIDALSKMVDPSLNGMYPAKSLSRFADIIALCIQPEPEFRPPMSEVVQQL 669          
BLAST of FC929364 vs. ExPASy Swiss-Prot
Match: APK1A_ARATH (Protein kinase APK1A, chloroplastic OS=Arabidopsis thaliana GN=APK1A PE=2 SV=1)

HSP 1 Score: 178.718 bits (452), Expect = 3.268e-44
Identity = 102/235 (43.40%), Postives = 145/235 (61.70%), Query Frame = 3
Query:    3 EFLNEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALFGGENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDE-EEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAF-HLHRSGTLMELVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLE 701
            E+L E+  +    H +LVK+ G C+E +  LLVYE+M   SL + LF        L+W +R K+ LG A+GLAFLH  S  ++++RD K +N+LLD + N K+SDFGLAK     +K+H+STRV GT GY APEY   G+LT K+DVYSFGVV LE++SG+  +     S     ++WA  +L     +  ++D RL  +++  EA ++  ++L C      LRP MSEVVS LE
Sbjct:  118 EWLAEVNYLGQFSHRHLVKLIGYCLEDEHRLLVYEFMPRGSLENHLFRRGLYFQPLSWKLRLKVALGAAKGLAFLHS-SETRVIYRDFKTSNILLDSEYNAKLSDFGLAKDGPIGDKSHVSTRVMGTHGYAAPEYLATGHLTTKSDVYSFGVVLLELLSGRRAVDKNRPSGERNLVEWAKPYLVNKRKIFRVIDNRLQDQYSMEEACKVATLSLRCLTTEIKLRPNMSEVVSHLE 351          
BLAST of FC929364 vs. ExPASy Swiss-Prot
Match: Y5487_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g48740 OS=Arabidopsis thaliana GN=At5g48740 PE=2 SV=1)

HSP 1 Score: 177.563 bits (449), Expect = 7.279e-44
Identity = 93/233 (39.91%), Postives = 145/233 (62.23%), Query Frame = 3
Query:    6 FLNEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALFGGENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAK-LDEEEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHRSGTLMELVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLE 701
            F+NE+ ++S ++H NLV   G C E  + +LVYEY+   SLA  L+G  + +  LNW  R K+ +  A+GL +LH  S  +I+HRD+K++N+LLD+D+N K+SDFGL+K   + + +HI+T V GT GY+ PEY     LT K+DVYSFGVV LE++ G+  +S+    +    + WA    ++G   E+VD  L   F+    ++   IA+ C     S RP+++EV++ L+
Sbjct:  647 FINEVHLLSQIRHQNLVSFEGFCYEPKRQILVYEYLSGGSLADHLYGPRSKRHSLNWVSRLKVAVDAAKGLDYLHNGSEPRIIHRDVKSSNILLDKDMNAKVSDFGLSKQFTKADASHITTVVKGTAGYLDPEYYSTLQLTEKSDVYSFGVVLLELICGREPLSHSGSPDSFNLVLWARPNLQAGA-FEIVDDILKETFDPASMKKAASIAIRCVGRDASGRPSIAEVLTKLK 878          
BLAST of FC929364 vs. ExPASy Swiss-Prot
Match: NORK_MEDTR (Nodulation receptor kinase OS=Medicago truncatula GN=NORK PE=1 SV=2)

HSP 1 Score: 175.252 bits (443), Expect = 3.613e-43
Identity = 97/264 (36.74%), Postives = 152/264 (57.58%), Query Frame = 3
Query:    3 EFLNEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALFGGENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAK-LDEEEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHRSGTLMELVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLEGS----SNIPDVIPEAGGLSEDLRFKTLRD 779
            EF NE+ ++S +QH NLV + G C E DQ +LVY +M N SL   L+G  + +  L+WP R  I LG ARGLA+LH      ++HRD+K++N+LLD+ +  K++DFG +K   +E  +++S  V GT GY+ PEY     L+ K+DV+SFGVV LEIVSG+  ++          ++WA    R+  + E+VDP +   ++     R++++AL C     + RP M ++V  LE +    +N  + +     L    R+  + D
Sbjct:  636 EFDNELNLLSAIQHENLVPLLGYCNEYDQQILVYPFMSNGSLLDRLYGEASKRKILDWPTRLSIALGAARGLAYLHTFPGRSVIHRDVKSSNILLDQSMCAKVADFGFSKYAPQEGDSYVSLEVRGTAGYLDPEYYKTQQLSEKSDVFSFGVVLLEIVSGREPLNIKRPRIEWSLVEWAKPYIRASKVDEIVDPGIKGGYHAEALWRVVEVALQCLEPYSTYRPCMVDIVRELEDALIIENNASEYMKSIDSLGGSNRYSIVMD 899          
BLAST of FC929364 vs. ExPASy Swiss-Prot
Match: WAKLC_ARATH (Wall-associated receptor kinase-like 3 OS=Arabidopsis thaliana GN=WAKL3 PE=2 SV=2)

HSP 1 Score: 173.711 bits (439), Expect = 1.051e-42
Identity = 95/239 (39.75%), Postives = 138/239 (57.74%), Query Frame = 3
Query:    3 EFLNEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALFGGENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEEEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHRSGTLMELVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLEGSSNIP 719
            EF+NEI ++S + H N+VK+ GCC+E +  +LVYEY+ N  L   L   E     + W VR +I + IA  L+++H  + F I HRDIK TN+LLD     KISDFG ++    ++TH++T VAGT GYM PEY L    T+K+DVYSFGVV +E+++G+  MS V          +     +    ++++D R+  E  +V A  + K+A  C N   + RP M EV   LE   + P
Sbjct:  468 EFINEIVLLSQINHRNIVKLLGCCLETEVPILVYEYIPNGDLFKRLHD-EYDDYMMTWEVRLRIAVEIAGALSYMHSAASFPIFHRDIKTTNILLDEKYRAKISDFGTSRSVATDQTHLTTLVAGTFGYMDPEYFLSSQYTHKSDVYSFGVVLVELITGEKPMSRVRSEEGIGLATYFLEAMKENRAVDIIDIRIKDESKQVMA--VAKLARRCLNRKGNKRPNMREVSIKLERIRSSP 703          
BLAST of FC929364 vs. ExPASy Swiss-Prot
Match: NORK_PEA (Nodulation receptor kinase OS=Pisum sativum GN=NORK PE=1 SV=1)

HSP 1 Score: 173.711 bits (439), Expect = 1.051e-42
Identity = 97/264 (36.74%), Postives = 150/264 (56.82%), Query Frame = 3
Query:    3 EFLNEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALFGGENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAK-LDEEEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHRSGTLMELVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLEGS----SNIPDVIPEAGGLSEDLRFKTLRD 779
            EF NE+ ++S +QH NLV + G C E DQ +LVY +M N SL   L+G    +  L+WP R  I LG ARGLA+LH      ++HRD+K++N+LLD  +  K++DFG +K   +E  +++S  V GT GY+ PEY     L+ K+DV+SFGVV LEIVSG+  ++          ++WA    R+  + E+VDP +   ++     R++++AL C     + RP M ++V  LE +    +N  + +     L    R+  + D
Sbjct:  635 EFDNELNLLSAIQHENLVPLLGYCNEYDQQILVYPFMSNGSLLDRLYGEPAKRKILDWPTRLSIALGAARGLAYLHTFPGRSVIHRDVKSSNILLDHSMCAKVADFGFSKYAPQEGDSYVSLEVRGTAGYLDPEYYKTQQLSEKSDVFSFGVVLLEIVSGREPLNIKRPRVEWSLVEWAKPYIRASKVDEIVDPGIKGGYHAEALWRVVEVALQCLEPYSTYRPCMVDIVRELEDALIIENNASEYMKSIDSLGGSNRYSIVMD 898          
The following BLAST results are available for this feature:
BLAST of FC929364 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
EXS_ARATH1.733e-4543.64Leucine-rich repeat receptor protein kinase EXS OS... [more]
Y5457_ARATH3.860e-4540.43Probable LRR receptor-like serine/threonine-protei... [more]
BIK1_ARATH5.041e-4543.83Serine/threonine-protein kinase BIK1 OS=Arabidopsi... [more]
NAK_ARATH8.599e-4542.98Probable serine/threonine-protein kinase NAK OS=Ar... [more]
SRF8_ARATH3.268e-4441.38Protein STRUBBELIG-RECEPTOR FAMILY 8 OS=Arabidopsi... [more]
APK1A_ARATH3.268e-4443.40Protein kinase APK1A, chloroplastic OS=Arabidopsis... [more]
Y5487_ARATH7.279e-4439.91Probable LRR receptor-like serine/threonine-protei... [more]
NORK_MEDTR3.613e-4336.74Nodulation receptor kinase OS=Medicago truncatula ... [more]
WAKLC_ARATH1.051e-4239.75Wall-associated receptor kinase-like 3 OS=Arabidop... [more]
NORK_PEA1.051e-4236.74Nodulation receptor kinase OS=Pisum sativum GN=NOR... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAH2BB12RM1 PhII-IIIV1 Citrus clementina cDNA clone KN0AAH2BB12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929364 ID=FC929364; Name=FC929364; organism=Citrus clementina; type=EST; length=803bp
GTGAATTCTTAAATGAGATAGCCATGATTTCGTGTTTGCAACACCCAAAT
CTTGTTAAAATTCATGGCTGTTGTGTTGAAGGGGATCAACTCTTGCTAGT
ATATGAATACATGGAAAACAACAGCCTTGCCCATGCTTTATTCGGTGGCG
AAAACAGTCAACTGAAATTGAACTGGCCAGTGAGGCAGAAGATCTGCCTT
GGGATAGCCAGAGGTTTAGCTTTTCTACATGAAGAATCCAGATTCAAAAT
AGTTCATAGAGACATCAAAGCTACGAATGTTCTGCTAGATAGAGATTTAA
ACCCCAAAATATCTGACTTTGGACTGGCTAAGCTTGATGAGGAGGAAAAA
ACTCACATCAGTACTCGAGTTGCTGGAACAATAGGATATATGGCACCAGA
GTACGCTCTATGGGGTTACTTGACCTACAAAGCAGATGTTTACAGTTTCG
GAGTTGTGGCTTTGGAAATCGTCAGTGGGAAGAATAATATGAGTTATGTG
CCAGACAGTAATTGCACCTGTCCTCTTGACTGGGCCTTCCATTTACACCG
AAGTGGTACGTTAATGGAGTTAGTGGATCCAAGGCTCGGATCAGAATTCA
ACAAGGTTGAAGCAGAGAGAATGATTAAAATAGCACTCTTATGCACCAAT
GCGTCACCTTCACTAAGGCCAACCATGTCTGAAGTGGTAAGCATGCTGGA
AGGATCTTCTAACATTCCGGATGTAATCCCTGAAGCCGGTGGTTTGAGTG
AAGACTTGAGGTTTAAAACTCTAAGAGACCATCCAAGAGAAATGAATATT
TCG
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