FC929364

Overview
NameFC929364
Unique NameFC929364
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length803
Libraries
Library NameType
PhII-IIIV1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC929364 vs. ExPASy Swiss-Prot
Match: Y5977_ARATH (Probable leucine-rich repeat receptor-like protein kinase At5g49770 OS=Arabidopsis thaliana GN=At5g49770 PE=2 SV=1)

HSP 1 Score: 173.326 bits (438), Expect = 1.373e-42
Identity = 103/250 (41.20%), Postives = 151/250 (60.40%), Query Frame = 3
Query:    3 EFLNEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALFGGENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKL-DEEEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNM---SYVPDSNCTCPLDWAFHLHRSGTLMELVDPRLGSEFNKVEA-ERMIKIALLCTNASPSLRPTMSEVVSMLEGSSNIPDVIPEA 737
            EF  EI ++S + H N+VK+ G C +  + +LVYEY+ N SL   L G   + +KL+W  R KI LG  +GLA+LHE +   I+HRD+K+ N+LLD  L  K++DFGL+KL  + EK H++T+V GT+GY+ PEY +   LT K+DVY FGVV LE+++GK+ +   SYV        +D + +L+    L EL+D  +      ++  E+ + +AL C       RPTMSEVV  LE    +  + P A
Sbjct:  674 EFKTEIELLSRVHHKNVVKLLGFCFDQKEQMLVYEYIPNGSLRDGLSG--KNGVKLDWTRRLKIALGSGKGLAYLHELADPPIIHRDVKSNNILLDEHLTAKVADFGLSKLVGDPEKAHVTTQVKGTMGYLDPEYYMTNQLTEKSDVYGFGVVMLELLTGKSPIDRGSYVV-KEVKKKMDKSRNLY---DLQELLDTTIIQNSGNLKGFEKYVDVALQCVEPEGVNRPTMSEVVQELESILRLVGLNPNA 917          
BLAST of FC929364 vs. ExPASy Swiss-Prot
Match: Y1677_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g67720 OS=Arabidopsis thaliana GN=At1g67720 PE=2 SV=1)

HSP 1 Score: 173.326 bits (438), Expect = 1.373e-42
Identity = 94/241 (39.00%), Postives = 142/241 (58.92%), Query Frame = 3
Query:    3 EFLNEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALFGGENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEEEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMS---YVPDSNCTCPLDWAFHLHRSGTLMELVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLEGSSNI 716
            +F+ E+A++S + H NLV + G C E D+ +LVYEYM N SL   L G  + +  L+W  R +I    A+GL +LH      I+HRD+K++N+LLD ++  K+SDFGL++  EE+ TH+S+   GT+GY+ PEY     LT K+DVYSFGVV  E++SGK  +S   + P+ N    + WA  L R G +  ++DP + S        R+ ++A  C       RP M EV+  ++ +  I
Sbjct:  646 QFVTEVALLSRIHHRNLVPLIGYCEEADRRILVYEYMHNGSLGDHLHGSSDYK-PLDWLTRLQIAQDAAKGLEYLHTGCNPSIIHRDVKSSNILLDINMRAKVSDFGLSRQTEEDLTHVSSVAKGTVGYLDPEYYASQQLTEKSDVYSFGVVLFELLSGKKPVSAEDFGPELNI---VHWARSLIRKGDVCGIIDPCIASNVKIESVWRVAEVANQCVEQRGHNRPRMQEVIVAIQDAIRI 882          
BLAST of FC929364 vs. ExPASy Swiss-Prot
Match: WAKLA_ARATH (Wall-associated receptor kinase-like 1 OS=Arabidopsis thaliana GN=WAKL1 PE=1 SV=1)

HSP 1 Score: 173.326 bits (438), Expect = 1.373e-42
Identity = 91/240 (37.92%), Postives = 137/240 (57.08%), Query Frame = 3
Query:    3 EFLNEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALFGGENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEEEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHRSGTLMELVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLEGSSNIPD 722
            EF+NEI ++S + H N+VK+ GCC+E +  +LVYEY+ N  L   L   E+    + W VR +I + IA  L ++H  + F I HRDIK TN+LLD     K+SDFG ++    ++TH++T VAGT GYM PEY L    T+K+DVYSFGVV +E+++G+  +S V                +   +++++D R+  E    +   + K+A  C N     RP M EV + LE   + P+
Sbjct:  469 EFINEIVLLSQINHRNIVKLLGCCLETEVPILVYEYIPNGDLFKRLHD-ESDDYTMTWEVRLRIAIEIAGALTYMHSAASFPIFHRDIKTTNILLDEKYRAKVSDFGTSRSVTLDQTHLTTLVAGTFGYMDPEYFLSSQYTHKSDVYSFGVVLVELITGEKPLSRVRSEEGRGLATHFLEAMKENRVIDIIDIRIKDESKLEQVMAVAKLARKCLNRKGKNRPNMKEVSNELERIRSSPE 707          
BLAST of FC929364 vs. ExPASy Swiss-Prot
Match: PSKR2_ARATH (Phytosulfokine receptor 2 OS=Arabidopsis thaliana GN=PSKR2 PE=2 SV=1)

HSP 1 Score: 171.785 bits (434), Expect = 3.994e-42
Identity = 89/233 (38.20%), Postives = 132/233 (56.65%), Query Frame = 3
Query:    3 EFLNEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALFGGENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEEEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHRSGTLMELVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLE 701
            EF  E+  +S  +H NLV + G C  G+  LL+Y +MEN SL + L    +  + L W VR KI  G ARGLA+LH+     ++HRD+K++N+LLD      ++DFGLA+L     TH++T + GT+GY+ PEY+     T + DVYSFGVV LE+V+G+  +      +C   +   F +       EL+D  +    N+     M++IA  C +  P  RP + EVV+ LE
Sbjct:  794 EFQAEVEALSRAEHKNLVSLQGYCKHGNDRLLIYSFMENGSLDYWLHERVDGNMTLIWDVRLKIAQGAARGLAYLHKVCEPNVIHRDVKSSNILLDEKFEAHLADFGLARLLRPYDTHVTTDLVGTLGYIPPEYSQSLIATCRGDVYSFGVVLLELVTGRRPVEVCKGKSCRDLVSRVFQMKAEKREAELIDTTIRENVNERTVLEMLEIACKCIDHEPRRRPLIEEVVTWLE 1026          
BLAST of FC929364 vs. ExPASy Swiss-Prot
Match: Y5900_ARATH (Putative receptor-like protein kinase At5g39000 OS=Arabidopsis thaliana GN=At5g39000 PE=3 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 5.217e-42
Identity = 96/237 (40.51%), Postives = 142/237 (59.92%), Query Frame = 3
Query:    3 EFLNEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALFGGEN-SQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKL--DEEEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKN-NMSYVPDSNCTCPLDWAFHLHRSGTLMELVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLE 701
            EF  E+ M+S L+H +LV + G C E ++++LVYEYM + +L   LF  +  S   L+W  R +IC+G ARGL +LH  +++ I+HRDIK TN+LLD +   K+SDFGL+++      +TH+ST V GT GY+ PEY     LT K+DVYSFGVV LE++  +   M  VP       + W    +R GT+ +++D  L ++      E+  +IA+ C       RP M++VV  LE
Sbjct:  559 EFETELEMLSKLRHVHLVSLIGYCDEDNEMVLVYEYMPHGTLKDHLFRRDKTSDPPLSWKRRLEICIGAARGLQYLHTGAKYTIIHRDIKTTNILLDENFVTKVSDFGLSRVGPTSASQTHVSTVVKGTFGYLDPEYYRRQVLTEKSDVYSFGVVLLEVLCCRPIRMQSVPPEQADL-IRWVKSNYRRGTVDQIIDSDLSADITSTSLEKFCEIAVRCVQDRGMERPPMNDVVWALE 794          
BLAST of FC929364 vs. ExPASy Swiss-Prot
Match: CX32_ARATH (Probable serine/threonine-protein kinase Cx32, chloroplastic OS=Arabidopsis thaliana GN=At4g35600 PE=1 SV=2)

HSP 1 Score: 169.474 bits (428), Expect = 1.982e-41
Identity = 99/245 (40.41%), Postives = 143/245 (58.37%), Query Frame = 3
Query:    3 EFLNEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALFGGENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDE-EEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAF-HLHRSGTLMELVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLEGSSNIPDVIP 731
            E+ +E+  +  L H NLVK+ G C E  +LLLVYE+M   SL   LF   +      W +R KI +G ARGLAFLH   R ++++RD KA+N+LLD + + K+SDFGLAKL   +EK+H++TR+ GT GY APEY   G+L  K+DV++FGVV LEI++G    +          +DW    L     + +++D  +  ++    A  M +I L C    P  RP M EVV +LE    + +V+P
Sbjct:  136 EWRSEVNFLGMLSHRNLVKLLGYCREDKELLLVYEFMPKGSLESHLFRRNDP---FPWDLRIKIVIGAARGLAFLHSLQR-EVIYRDFKASNILLDSNYDAKLSDFGLAKLGPADEKSHVTTRIMGTYGYAAPEYMATGHLYVKSDVFAFGVVLLEIMTGLTAHNTKRPRGQESLVDWLRPELSNKHRVKQIMDKGIKGQYTTKVATEMARITLSCIEPDPKNRPHMKEVVEVLEHIQGL-NVVP 375          
BLAST of FC929364 vs. ExPASy Swiss-Prot
Match: Y5613_ARATH (Probable receptor-like protein kinase At5g61350 OS=Arabidopsis thaliana GN=At5g61350 PE=2 SV=1)

HSP 1 Score: 168.703 bits (426), Expect = 3.381e-41
Identity = 96/255 (37.65%), Postives = 146/255 (57.25%), Query Frame = 3
Query:    3 EFLNEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALFGGENSQLK----LNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEEEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHRSGTLMELVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLEGSSNIPDVIPEAGGLSED 755
            EF  EI M+S L+H +LV + G C E  +++LVYEYM N  L   L+G + +       L+W  R +IC+G ARGL +LH  +   I+HRD+K TN+LLD +L  K+SDFGL+K    ++ H+ST V G+ GY+ PEY     LT K+DVYSFGVV  E++  +  ++           ++A +LHR G L +++DP++    +K    + ++ A  C       RP M +V+  LE +  + +   +   LSED
Sbjct:  565 EFQTEIQMLSKLRHRHLVSLIGFCDENKEMILVYEYMSNGPLRDHLYGSKENDPNPIPTLSWKQRLEICIGSARGLHYLHTGAAQGIIHRDVKTTNILLDENLVAKVSDFGLSKDAPMDEGHVSTAVKGSFGYLDPEYFRRQQLTDKSDVYSFGVVLFEVLCARPVINPQLPREQVNLAEYAMNLHRKGMLEKIIDPKIVGTISKGSLRKFVEAAEKCLAEYGVDRPGMGDVLWNLEYALQLQEASAQV-DLSED 818          
BLAST of FC929364 vs. ExPASy Swiss-Prot
Match: IKU2_ARATH (Receptor-like protein kinase HAIKU2 OS=Arabidopsis thaliana GN=IKU2 PE=1 SV=1)

HSP 1 Score: 168.703 bits (426), Expect = 3.381e-41
Identity = 98/239 (41.00%), Postives = 144/239 (60.25%), Query Frame = 3
Query:    3 EFLNEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALFGGENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKL---DEEEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHRSGT---LMELVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLE 701
            EF  E+A +S ++H N+VK+       D  LLVYEYM N SL   L      Q ++ W VRQ + LG A+GL +LH      ++HRD+K++N+LLD +  P+I+DFGLAK+   D  ++   +  V GT+GY+APEYA    +  K+DVYSFGVV +E+V+GK  +      N    + W + + +      +M+L+D  +  E+ K +A +++ IALLCT+ SP  RP M  VVSMLE
Sbjct:  729 EFEAEVATLSNIKHINVVKLFCSITCEDSKLLVYEYMPNGSLWEQLHERRGEQ-EIGWRVRQALALGAAKGLEYLHHGLDRPVIHRDVKSSNILLDEEWRPRIADFGLAKIIQADSVQRDFSAPLVKGTLGYIAPEYAYTTKVNEKSDVYSFGVVLMELVTGKKPLETDFGENNDIVM-WVWSVSKETNREMMMKLIDTSIEDEY-KEDALKVLTIALLCTDKSPQARPFMKSVVSMLE 964          
BLAST of FC929364 vs. ExPASy Swiss-Prot
Match: Y2706_ARATH (Probable receptor-like protein kinase At2g47060 OS=Arabidopsis thaliana GN=At2g47060 PE=2 SV=1)

HSP 1 Score: 167.933 bits (424), Expect = 5.768e-41
Identity = 99/252 (39.29%), Postives = 139/252 (55.16%), Query Frame = 3
Query:    3 EFLNEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALFG-----GENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEEEKTHI-STRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHRSGTLMELVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLEGSSNIPDVIPEAG 740
            EFL +++M+S L+H N V++ G CV+G+  +L YE+  N SL   L G     G      L+W  R KI +G ARGL +LHE++   I+HRDIK++NVLL  D   KI+DF L+    +    + STRV GT GY APEYA+ G L  K+DVYSFGVV LE+++G+  + +         + WA        + + VD RLG ++      ++  +A LC       RP MS VV  L+   N   V P  G
Sbjct:  112 EFLAQVSMVSRLKHDNFVQLLGYCVDGNSRILSYEFANNGSLHDILHGRKGVKGAQPGPVLSWYQRVKIAVGAARGLEYLHEKANPHIIHRDIKSSNVLLFEDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHRLPRGQQSLVTWATPKLSEDKVKQCVDARLGGDYPPKAVAKLAAVAALCVQYEADFRPNMSIVVKALQPLLNARAVAPGEG 363          
BLAST of FC929364 vs. ExPASy Swiss-Prot
Match: RCH2_ARATH (Receptor-like protein kinase 2 OS=Arabidopsis thaliana GN=RCH2 PE=1 SV=1)

HSP 1 Score: 167.933 bits (424), Expect = 5.768e-41
Identity = 100/237 (42.19%), Postives = 145/237 (61.18%), Query Frame = 3
Query:    6 FLNEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALFGGENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKL-DEEEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMS-YVPDSNCTCPLDWAFHLHRSGTLMELVDPRLGSEFNKVEAERMIKI---ALLCTNASPSLRPTMSEVVSMLE 701
            F  E+  +  ++H N+V+  GCC   +  LL+Y+YM N SL   L     S L  +W +R +I LG A+GLA+LH +    IVHRDIKA N+L+  D  P I+DFGLAKL DE +    S  VAG+ GY+APEY     +T K+DVYS+GVV LE+++GK  +   VP+      +DW   + ++   +E++D  L S   + EA+ M+++   ALLC N+SP  RPTM +V +ML+
Sbjct:  836 FSAEVKTLGTIRHKNIVRFLGCCWNRNTRLLMYDYMPNGSLGSLLHERRGSSL--DWDLRYRILLGAAQGLAYLHHDCLPPIVHRDIKANNILIGLDFEPYIADFGLAKLVDEGDIGRCSNTVAGSYGYIAPEYGYSMKITEKSDVYSYGVVVLEVLTGKQPIDPTVPEG--IHLVDW---VRQNRGSLEVLDSTLRSR-TEAEADEMMQVLGTALLCVNSSPDERPTMKDVAAMLK 1064          
The following BLAST results are available for this feature:
BLAST of FC929364 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
Y5977_ARATH1.373e-4241.20Probable leucine-rich repeat receptor-like protein... [more]
Y1677_ARATH1.373e-4239.00Probable LRR receptor-like serine/threonine-protei... [more]
WAKLA_ARATH1.373e-4237.92Wall-associated receptor kinase-like 1 OS=Arabidop... [more]
PSKR2_ARATH3.994e-4238.20Phytosulfokine receptor 2 OS=Arabidopsis thaliana ... [more]
Y5900_ARATH5.217e-4240.51Putative receptor-like protein kinase At5g39000 OS... [more]
CX32_ARATH1.982e-4140.41Probable serine/threonine-protein kinase Cx32, chl... [more]
Y5613_ARATH3.381e-4137.65Probable receptor-like protein kinase At5g61350 OS... [more]
IKU2_ARATH3.381e-4141.00Receptor-like protein kinase HAIKU2 OS=Arabidopsis... [more]
Y2706_ARATH5.768e-4139.29Probable receptor-like protein kinase At2g47060 OS... [more]
RCH2_ARATH5.768e-4142.19Receptor-like protein kinase 2 OS=Arabidopsis thal... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionKN0AAH2BB12RM1 PhII-IIIV1 Citrus clementina cDNA clone KN0AAH2BB12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929364 ID=FC929364; Name=FC929364; organism=Citrus clementina; type=EST; length=803bp
GTGAATTCTTAAATGAGATAGCCATGATTTCGTGTTTGCAACACCCAAAT
CTTGTTAAAATTCATGGCTGTTGTGTTGAAGGGGATCAACTCTTGCTAGT
ATATGAATACATGGAAAACAACAGCCTTGCCCATGCTTTATTCGGTGGCG
AAAACAGTCAACTGAAATTGAACTGGCCAGTGAGGCAGAAGATCTGCCTT
GGGATAGCCAGAGGTTTAGCTTTTCTACATGAAGAATCCAGATTCAAAAT
AGTTCATAGAGACATCAAAGCTACGAATGTTCTGCTAGATAGAGATTTAA
ACCCCAAAATATCTGACTTTGGACTGGCTAAGCTTGATGAGGAGGAAAAA
ACTCACATCAGTACTCGAGTTGCTGGAACAATAGGATATATGGCACCAGA
GTACGCTCTATGGGGTTACTTGACCTACAAAGCAGATGTTTACAGTTTCG
GAGTTGTGGCTTTGGAAATCGTCAGTGGGAAGAATAATATGAGTTATGTG
CCAGACAGTAATTGCACCTGTCCTCTTGACTGGGCCTTCCATTTACACCG
AAGTGGTACGTTAATGGAGTTAGTGGATCCAAGGCTCGGATCAGAATTCA
ACAAGGTTGAAGCAGAGAGAATGATTAAAATAGCACTCTTATGCACCAAT
GCGTCACCTTCACTAAGGCCAACCATGTCTGAAGTGGTAAGCATGCTGGA
AGGATCTTCTAACATTCCGGATGTAATCCCTGAAGCCGGTGGTTTGAGTG
AAGACTTGAGGTTTAAAACTCTAAGAGACCATCCAAGAGAAATGAATATT
TCG
back to top