FC929365

Overview
NameFC929365
Unique NameFC929365
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length810
Libraries
Library NameType
PhII-IIIV1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig9269 contig Ccv1_Contig9269:11..820. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC929365 vs. ExPASy Swiss-Prot
Match: PPID_ASPOR (Peptidyl-prolyl cis-trans isomerase D OS=Aspergillus oryzae GN=cpr6 PE=3 SV=1)

HSP 1 Score: 180.644 bits (457), Expect = 8.712e-45
Identity = 88/151 (58.28%), Postives = 106/151 (70.20%), Query Frame = 3
Query:  357 PKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSXFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVQGIEKVGS 809
            P+VFFD+ +G +  GRI +EL   + P+TAENFRALCTGEKG+GK GKPLH+KGS FHRVI  FM Q            ESIYG  F DENF  KH  P +LSMAN+GPGTNGSQFF+ T  T  LDGKHVVFG+V+ G  VV+ +E + +
Sbjct:    8 PRVFFDIQIGNEKTGRIALELV--LVPKTAENFRALCTGEKGMGKQGKPLHFKGSIFHRVIKQFMIQGGDFTAFNGTGGESIYGEKFPDENFELKHDKPFLLSMANSGPGTNGSQFFITTVPTPHLDGKHVVFGEVINGKSVVRKVENMNT 156          
BLAST of FC929365 vs. ExPASy Swiss-Prot
Match: CP20B_ARATH (Peptidyl-prolyl cis-trans isomerase CYP20-2, chloroplastic OS=Arabidopsis thaliana GN=CYP20-2 PE=1 SV=1)

HSP 1 Score: 180.644 bits (457), Expect = 8.712e-45
Identity = 93/157 (59.24%), Postives = 112/157 (71.34%), Query Frame = 3
Query:  339 QSKMPNPKVFFDMTVG---GQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSXFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVQGIEK 800
            QSK+ + KV+FD++VG   G+ AGRIV+ L+ D  P+T ENFRALCTGEKG G       YKGS+FHRVI  FM Q            +S+YG  F DENF   H GPG+LSMANAGP TNGSQFF+CT KT WLDG+HVVFGQV+EGM+VV+ IE+
Sbjct:   85 QSKITH-KVYFDISVGNPVGKLAGRIVIGLYGDDVPQTVENFRALCTGEKGFG-------YKGSTFHRVIRDFMIQGGDFEKGNGTGGKSVYGRTFKDENFKLSHVGPGVLSMANAGPNTNGSQFFICTIKTSWLDGRHVVFGQVIEGMEVVKLIEE 233          
BLAST of FC929365 vs. ExPASy Swiss-Prot
Match: CYPC_YEAST (Peptidyl-prolyl cis-trans isomerase C, mitochondrial OS=Saccharomyces cerevisiae GN=CPR3 PE=1 SV=1)

HSP 1 Score: 179.489 bits (454), Expect = 1.941e-44
Identity = 91/158 (57.59%), Postives = 104/158 (65.82%), Query Frame = 3
Query:  336 NQSKMPNPKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSXFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVQGIEKVGS 809
            N +     KVFFD  V G   GRI  EL+ +V P+TAENFRALCTGEKG G       YKG  FHR+IP FM Q            +SIYGS FADENFVKKH   G+LSMANAGP TNGSQFF+ T    WLDGKHVVFG+V +GMD+V+ IE  G+
Sbjct:   15 NSASRLGKKVFFDPAVNGTKIGRIEFELYDNVVPKTAENFRALCTGEKGWG-------YKGVPFHRIIPDFMIQGGDTDLTNGFGGKSIYGSKFADENFVKKHDKAGLLSMANAGPNTNGSQFFITTVPCPWLDGKHVVFGEVTKGMDIVKAIESYGT 165          
BLAST of FC929365 vs. ExPASy Swiss-Prot
Match: CYPH_YEAST (Peptidyl-prolyl cis-trans isomerase OS=Saccharomyces cerevisiae GN=CPR1 PE=1 SV=3)

HSP 1 Score: 179.104 bits (453), Expect = 2.535e-44
Identity = 86/150 (57.33%), Postives = 103/150 (68.67%), Query Frame = 3
Query:  360 KVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSXFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVQGIEKVGS 809
            +V+FD+   GQP GR+V +L+ D+ P+TAENFRALCTGEKG G       Y GS FHRVIP FM Q            +SIYG  F DENF K H  PG+LSMANAGP TNGSQFF+ T    WLDGKHVVFG+VV+G D+V+ +E +GS
Sbjct:    3 QVYFDVEADGQPIGRVVFKLYNDIVPKTAENFRALCTGEKGFG-------YAGSPFHRVIPDFMLQGGDFTAGNGTGGKSIYGGKFPDENFKKHHDRPGLLSMANAGPNTNGSQFFITTVPCPWLDGKHVVFGEVVDGYDIVKKVESLGS 145          
BLAST of FC929365 vs. ExPASy Swiss-Prot
Match: PPIH_GIBZE (Peptidyl-prolyl cis-trans isomerase H OS=Gibberella zeae GN=CYP3 PE=3 SV=1)

HSP 1 Score: 176.407 bits (446), Expect = 1.643e-43
Identity = 90/156 (57.69%), Postives = 105/156 (67.31%), Query Frame = 3
Query:  342 SKMP---NPKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYG-SXFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVQGIE 797
            +K+P   NP VFFD+T+GG+P GRI  ELF DV P+TAENFR  CTGE      G+P  YKGS FHR+IP FMCQ              I+G   F DENF  KH  PG+LSMANAGP TNGSQFF+ T  T +LD KHVVFG+V EGMDVV+ +E
Sbjct:    4 TKLPESGNPLVFFDITIGGEPLGRITFELFKDVVPKTAENFRQFCTGESKT-PVGRPQGYKGSKFHRIIPNFMCQGGDFLNGDGTGSTCIWGFKSFEDENFTLKHDQPGLLSMANAGPNTNGSQFFITTVPTPFLDNKHVVFGKVFEGMDVVKKME 158          
BLAST of FC929365 vs. ExPASy Swiss-Prot
Match: PPIB_CRYNE (Peptidyl-prolyl cis-trans isomerase B OS=Cryptococcus neoformans GN=CPR2 PE=3 SV=1)

HSP 1 Score: 176.407 bits (446), Expect = 1.643e-43
Identity = 92/169 (54.44%), Postives = 111/169 (65.68%), Query Frame = 3
Query:  303 VRV*FVFFSPINQSKMP--NPKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSXFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVQGIEKV 803
            V + FV    ++ +K P    KV+FD+  GG+P GRIVM L+    P+TAENFRAL TG+   G+      Y+GSSFHR+I  FM Q            +SIYGS F DENF  KHTGPG+LSMANAG  TNGSQFF+CT KT WLD +HVVFG V+EGMDVV  +E V
Sbjct:   25 VAICFVLSPGVDAAKGPVITNKVYFDIEHGGKPLGRIVMGLYGKTVPKTAENFRALATGKNSDGED-LGYGYEGSSFHRIIKNFMIQGGDFTKGDGTGGKSIYGSKFPDENFKLKHTGPGVLSMANAGRDTNGSQFFICTVKTAWLDNRHVVFGHVLEGMDVVYAMENV 192          
BLAST of FC929365 vs. ExPASy Swiss-Prot
Match: PPIA2_RHIOR (Peptidyl-prolyl cis-trans isomerase A2 OS=Rhizopus oryzae GN=cyp1 PE=3 SV=1)

HSP 1 Score: 176.407 bits (446), Expect = 1.643e-43
Identity = 86/149 (57.72%), Postives = 104/149 (69.80%), Query Frame = 3
Query:  363 VFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSXFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVQGIEKVGS 809
            V+FD+++ G+PAGRI  +LF DV P+TA+NFRALCTGE+G G       YKGS FHRVIP FM Q            +SIYG  FADENF  KH+ PG+LSMANAGP TNGSQFF+ T    WLDG HVVFG+V + M++V  IE +GS
Sbjct:    3 VYFDISIDGKPAGRIEFQLFEDVVPKTAKNFRALCTGEQGFG-------YKGSKFHRVIPQFMLQGGDFTRGDGTGGKSIYGEKFADENFKLKHSEPGLLSMANAGPNTNGSQFFITTVPCSWLDGAHVVFGKVTKNMELVSKIESLGS 144          
BLAST of FC929365 vs. ExPASy Swiss-Prot
Match: PPIH_HUMAN (Peptidyl-prolyl cis-trans isomerase H OS=Homo sapiens GN=PPIH PE=1 SV=1)

HSP 1 Score: 176.022 bits (445), Expect = 2.146e-43
Identity = 85/157 (54.14%), Postives = 108/157 (68.79%), Query Frame = 3
Query:  333 INQSKMPNPKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSXFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVQGIEKV 803
            +  S   NP VFFD+++GGQ  GR+ +ELFADV P+TAENFR  CTGE    K G P+ YKGS+FHRVI  FM Q             SIY   FADENF  +H+ PG+LSMAN+GP TNG QFF+  +K +WLDGKHVVFG++++G+ V++ IE V
Sbjct:    3 VANSSPVNPVVFFDVSIGGQEVGRMKIELFADVVPKTAENFRQFCTGE--FRKDGVPIGYKGSTFHRVIKDFMIQGGDFVNGDGTGVASIYRGPFADENFKLRHSAPGLLSMANSGPSTNGCQFFITCSKCDWLDGKHVVFGKIIDGLLVMRKIENV 157          
BLAST of FC929365 vs. ExPASy Swiss-Prot
Match: PPIH_EMENI (Peptidyl-prolyl cis-trans isomerase H OS=Emericella nidulans GN=cyp3 PE=3 SV=2)

HSP 1 Score: 176.022 bits (445), Expect = 2.146e-43
Identity = 88/158 (55.70%), Postives = 110/158 (69.62%), Query Frame = 3
Query:  327 SPINQSKMPNPKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSX-FADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVQGIE 797
            S + Q+   NP VFFD+ +GG+P GR+ +ELFADVTPRTAENFR  CTGE    + G+P  YKGS FHRVI  FM Q             +IYG+  F+DENF  +H  PG+LSMAN+GP TNG QFF+ T  T +L+GKHVVFGQV++GMD+V+ IE
Sbjct:    6 SAVPQTTSSNPIVFFDVALGGEPLGRLKLELFADVTPRTAENFRQFCTGESK-NQQGRPQGYKGSKFHRVIKDFMIQGGDFVNGDGTGSCTIYGTPKFSDENFTLRHDRPGLLSMANSGPNTNGCQFFITTTATPFLNGKHVVFGQVIDGMDIVRMIE 162          
BLAST of FC929365 vs. ExPASy Swiss-Prot
Match: PPIH_BOVIN (Peptidyl-prolyl cis-trans isomerase H OS=Bos taurus GN=PPIH PE=2 SV=1)

HSP 1 Score: 176.022 bits (445), Expect = 2.146e-43
Identity = 85/157 (54.14%), Postives = 108/157 (68.79%), Query Frame = 3
Query:  333 INQSKMPNPKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSXFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVQGIEKV 803
            +  S   NP VFFD+++GGQ  GR+ +ELFADV P+TAENFR  CTGE    K G P+ YKGS+FHRVI  FM Q             SIY   FADENF  +H+ PG+LSMAN+GP TNG QFF+  +K +WLDGKHVVFG++++G+ V++ IE V
Sbjct:    3 VANSSPVNPVVFFDVSIGGQEVGRMKIELFADVVPKTAENFRQFCTGE--FRKDGVPIGYKGSTFHRVIKDFMIQGGDFVNGDGTGVASIYRGPFADENFKLRHSAPGLLSMANSGPSTNGCQFFITCSKCDWLDGKHVVFGKIIDGLLVMRKIENV 157          
The following BLAST results are available for this feature:
BLAST of FC929365 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 232
Match NameE-valueIdentityDescription
PPID_ASPOR8.712e-4558.28Peptidyl-prolyl cis-trans isomerase D OS=Aspergill... [more]
CP20B_ARATH8.712e-4559.24Peptidyl-prolyl cis-trans isomerase CYP20-2, chlor... [more]
CYPC_YEAST1.941e-4457.59Peptidyl-prolyl cis-trans isomerase C, mitochondri... [more]
CYPH_YEAST2.535e-4457.33Peptidyl-prolyl cis-trans isomerase OS=Saccharomyc... [more]
PPIH_GIBZE1.643e-4357.69Peptidyl-prolyl cis-trans isomerase H OS=Gibberell... [more]
PPIB_CRYNE1.643e-4354.44Peptidyl-prolyl cis-trans isomerase B OS=Cryptococ... [more]
PPIA2_RHIOR1.643e-4357.72Peptidyl-prolyl cis-trans isomerase A2 OS=Rhizopus... [more]
PPIH_HUMAN2.146e-4354.14Peptidyl-prolyl cis-trans isomerase H OS=Homo sapi... [more]
PPIH_EMENI2.146e-4355.70Peptidyl-prolyl cis-trans isomerase H OS=Emericell... [more]
PPIH_BOVIN2.146e-4354.14Peptidyl-prolyl cis-trans isomerase H OS=Bos tauru... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAH2BC01RM1 PhII-IIIV1 Citrus clementina cDNA clone KN0AAH2BC01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929365 ID=FC929365; Name=FC929365; organism=Citrus clementina; type=EST; length=810bp
GGCACGAGGTTGCTGGCGACGGCAAGGAGAATGGCCTCATTAGCAACCAC
TTCAGAGTCCAGGCGGTACTGCTGGCCTAACATGTAATGCCCCACGTAGT
CTGCACATTTTTCGGGAACAGTCGCCCATCCTATAACGTTATTAGTTTCC
ACTCCGAGTCGCCAACTCAGGCAGGACAAGCCGGGCACATCGTTGTTCCG
GGAACCGGCTTTCGGTCGGAGAAGATGAATCTGATGGGGGATGTCCATGC
TAAATCCATGGGATGTTGCTGCCTCGTGCCGAATTCGGCACGAGGATCAG
AAGTCCGTGTTTAGTTTGTTTTTTTCTCTCCAATCAACCAATCAAAAATG
CCAAACCCCAAAGTGTTCTTCGACATGACCGTCGGCGGTCAGCCCGCCGG
CAGGATCGTGATGGAGCTCTTCGCCGATGTCACCCCCCGAACCGCCGAGA
ACTTCCGCGCCCTCTGCACCGGCGAGAAAGGCATCGGCAAGTCCGGCAAG
CCACTCCACTACAAGGGCTCGTCCTTCCACCGTGTGATCCCCGGATTCAT
GTGCCAGGGGGGAGACTTCACCGCCGGAAACGGAACCGGAGGCGAATCAA
TCTACGGCTCANAATTCGCCGATGAGAACTTCGTGAAGAAGCACACCGGC
CCCGGAATCCTCTCCATGGCGAATGCCGGACCCGGAACCAACGGATCTCA
GTTCTTCGTCTGTACGGCCAAGACCGAGTGGCTCGATGGGAAGCACGTTG
TGTTCGGTCAAGTCGTCGAAGGAATGGACGTCGTNCAGGGCATCGAGAAA
GTGGGGTCCA
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