FC929367
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC929367 vs. ExPASy Swiss-Prot
Match: SYN_SHESH (Asparaginyl-tRNA synthetase OS=Shewanella sediminis (strain HAW-EB3) GN=asnS PE=3 SV=1) HSP 1 Score: 228.409 bits (581), Expect = 3.454e-59 Identity = 113/191 (59.16%), Postives = 137/191 (71.73%), Query Frame = 3 Query: 9 LLDHCFDDMEFMAKNYDKSCINRLRMVASTPFERITYTXXXXXXXXXXKEGKHFENKVEWGIDLASEHERYLTEVKFQKPVIVYNYPKGIKAFYMRLNDDLKTVAAMDVLVPKVGELIGGSQREERYDVIKSRIEDMGLPLEPYEWYLDLRRFGTVKHSGFGLGFERMILFATGIDNIRDVIPFPRYPGRA 581 +L+ DD+EF A+ DK+ I+RL S+ F ++ YT GK FE VEWGIDL SEHERYL E F+ PV+V NYPK IKAFYMRLNDD KTVAAMDVL P +GE+IGG+QREER DV+ +R+E+M L E Y WY D+RR+GTV HSGFGLGFER++ + TG+ NIRDVIPFPR P A Sbjct: 277 VLEERRDDLEFFAQRVDKTVIDRLESFVSSDFAQVDYTDAVEILKSC---GKKFEYPVEWGIDLQSEHERYLAEEHFKAPVVVKNYPKDIKAFYMRLNDDGKTVAAMDVLAPGIGEIIGGAQREERLDVLDARLEEMNLSKEDYWWYRDMRRYGTVPHSGFGLGFERLVSYVTGVSNIRDVIPFPRAPKSA 464
BLAST of FC929367 vs. ExPASy Swiss-Prot
Match: SYN_SERP5 (Asparaginyl-tRNA synthetase OS=Serratia proteamaculans (strain 568) GN=asnS PE=3 SV=1) HSP 1 Score: 228.409 bits (581), Expect = 3.454e-59 Identity = 111/191 (58.12%), Postives = 137/191 (71.73%), Query Frame = 3 Query: 9 LLDHCFDDMEFMAKNYDKSCINRLRMVASTPFERITYTXXXXXXXXXXKEGKHFENKVEWGIDLASEHERYLTEVKFQKPVIVYNYPKGIKAFYMRLNDDLKTVAAMDVLVPKVGELIGGSQREERYDVIKSRIEDMGLPLEPYEWYLDLRRFGTVKHSGFGLGFERMILFATGIDNIRDVIPFPRYPGRA 581 +L+ DDM+F A+ DK I+RL+ ++ F ++ YT G+ FEN V WGIDL+SEHERYL E F+ PV+V NYPK IKAFYMR+NDD KTVAAMDVL P +GE+IGG+QREER DV+ R+E MGL E Y WY DLRR+GTV H+GFGLGFER+I + TG+ N+RDVIPFPR P A Sbjct: 277 VLNERMDDMQFFAERVDKDAIDRLQRFVTSDFAQVDYTEAVEILIA---SGQTFENPVSWGIDLSSEHERYLAEKHFKAPVVVKNYPKDIKAFYMRMNDDGKTVAAMDVLAPGIGEIIGGAQREERLDVLDQRLEAMGLNKEDYWWYRDLRRYGTVPHAGFGLGFERLIAYVTGVQNVRDVIPFPRTPRNA 464
BLAST of FC929367 vs. ExPASy Swiss-Prot
Match: SYN_SHELP (Asparaginyl-tRNA synthetase OS=Shewanella loihica (strain ATCC BAA-1088 / PV-4) GN=asnS PE=3 SV=1) HSP 1 Score: 228.024 bits (580), Expect = 4.511e-59 Identity = 114/200 (57.00%), Postives = 140/200 (70.00%), Query Frame = 3 Query: 9 LLDHCF--------DDMEFMAKNYDKSCINRLRMVASTPFERITYTXXXXXXXXXXKEGKHFENKVEWGIDLASEHERYLTEVKFQKPVIVYNYPKGIKAFYMRLNDDLKTVAAMDVLVPKVGELIGGSQREERYDVIKSRIEDMGLPLEPYEWYLDLRRFGTVKHSGFGLGFERMILFATGIDNIRDVIPFPRYPGRAD 584 +L +CF DD+EF A+ DK+ I RL ++ F ++ YT GK FE VEWGIDL SEHERYL E F+ PV+V NYPK IKAFYMRLN+D KTVAAMDVL P +GE+IGG+QREER DV+ +R+++MGL E Y WY DLRR+GTV HSGFGLGFER++ + TG+ NIRDVIPFPR P A+ Sbjct: 269 MLKYCFRAVLNERRDDLEFFAQRVDKTVIERLESFVNSDFAQVDYTDAIEILKSC---GKKFEFDVEWGIDLQSEHERYLAEEHFKAPVVVKNYPKDIKAFYMRLNEDGKTVAAMDVLAPGIGEIIGGAQREERLDVLDTRLDEMGLSKEDYWWYRDLRRYGTVPHSGFGLGFERLVSYVTGVSNIRDVIPFPRAPKSAN 465
BLAST of FC929367 vs. ExPASy Swiss-Prot
Match: SYN_HAES2 (Asparaginyl-tRNA synthetase OS=Haemophilus somnus (strain 2336) GN=asnS PE=3 SV=1) HSP 1 Score: 228.024 bits (580), Expect = 4.511e-59 Identity = 113/186 (60.75%), Postives = 136/186 (73.12%), Query Frame = 3 Query: 27 DDMEFMAKNYDKSCINRLRMVASTPFERITYTXXXXXXXXXXKEGKHFENKVEWGIDLASEHERYLTEVKFQKPVIVYNYPKGIKAFYMRLNDDLKTVAAMDVLVPKVGELIGGSQREERYDVIKSRIEDMGLPLEPYEWYLDLRRFGTVKHSGFGLGFERMILFATGIDNIRDVIPFPRYPGRAD 584 DD++F K+ DK+ I RL+ ++ F +I YT K GK FE V WGIDL+SEHERYL E F+ PV+V NYPK IKAFYMRLNDD KTVAAMDVL P +GE+IGGSQREER +V+ RI +MGL E Y WY DLRR+GTV H+GFGLGFER+I++ TG+ NIRDVIPFPR P A+ Sbjct: 284 DDLKFFEKHVDKNVITRLKDFINSDFAQIDYTDAIDILL---KSGKAFEFPVSWGIDLSSEHERYLAEEYFKSPVVVKNYPKDIKAFYMRLNDDGKTVAAMDVLAPGIGEIIGGSQREERLEVLDKRIAEMGLKAEDYWWYRDLRRYGTVPHAGFGLGFERLIVYVTGVQNIRDVIPFPRTPRNAN 466
BLAST of FC929367 vs. ExPASy Swiss-Prot
Match: SYN_HAES1 (Asparaginyl-tRNA synthetase OS=Haemophilus somnus (strain 129Pt) GN=asnS PE=3 SV=1) HSP 1 Score: 228.024 bits (580), Expect = 4.511e-59 Identity = 113/186 (60.75%), Postives = 136/186 (73.12%), Query Frame = 3 Query: 27 DDMEFMAKNYDKSCINRLRMVASTPFERITYTXXXXXXXXXXKEGKHFENKVEWGIDLASEHERYLTEVKFQKPVIVYNYPKGIKAFYMRLNDDLKTVAAMDVLVPKVGELIGGSQREERYDVIKSRIEDMGLPLEPYEWYLDLRRFGTVKHSGFGLGFERMILFATGIDNIRDVIPFPRYPGRAD 584 DD++F K+ DK+ I RL+ ++ F +I YT K GK FE V WGIDL+SEHERYL E F+ PV+V NYPK IKAFYMRLNDD KTVAAMDVL P +GE+IGGSQREER +V+ RI +MGL E Y WY DLRR+GTV H+GFGLGFER+I++ TG+ NIRDVIPFPR P A+ Sbjct: 284 DDLKFFEKHVDKNVITRLKDFINSDFAQIDYTDAIDILL---KSGKAFEFPVSWGIDLSSEHERYLAEEYFKSPVVVKNYPKDIKAFYMRLNDDGKTVAAMDVLAPGIGEIIGGSQREERLEVLDKRIAEMGLKAEDYWWYRDLRRYGTVPHAGFGLGFERLIVYVTGVQNIRDVIPFPRTPRNAN 466
BLAST of FC929367 vs. ExPASy Swiss-Prot
Match: SYN_AERHH (Asparaginyl-tRNA synthetase OS=Aeromonas hydrophila subsp. hydrophila (strain ATCC 7966 / NCIB 9240) GN=asnS PE=3 SV=1) HSP 1 Score: 228.024 bits (580), Expect = 4.511e-59 Identity = 112/186 (60.22%), Postives = 135/186 (72.58%), Query Frame = 3 Query: 27 DDMEFMAKNYDKSCINRLRMVASTPFERITYTXXXXXXXXXXKEGKHFENKVEWGIDLASEHERYLTEVKFQKPVIVYNYPKGIKAFYMRLNDDLKTVAAMDVLVPKVGELIGGSQREERYDVIKSRIEDMGLPLEPYEWYLDLRRFGTVKHSGFGLGFERMILFATGIDNIRDVIPFPRYPGRAD 584 DD+EF A++ DK I RL ++ F +I YT GK FE V WGIDL+SEHERYL E F+ PV+V NYPK IKAFYMRLNDD KTVAAMDVL P +GE+IGGSQREER DV+ +R+ +MGL E Y WY DLRR+GTV HSGFGLGFER++++ TG+ N+RDVIPFPR P A+ Sbjct: 283 DDLEFFAQHVDKDAIGRLERFVASDFAQIDYTDAIEVLKNC---GKKFEFPVSWGIDLSSEHERYLAEEHFKSPVVVKNYPKDIKAFYMRLNDDGKTVAAMDVLAPGIGEIIGGSQREERLDVLDARLAEMGLNKEDYWWYRDLRRYGTVPHSGFGLGFERLVVYVTGMGNVRDVIPFPRTPRTAE 465
BLAST of FC929367 vs. ExPASy Swiss-Prot
Match: SYN_MANSM (Asparaginyl-tRNA synthetase OS=Mannheimia succiniciproducens (strain MBEL55E) GN=asnS PE=3 SV=1) HSP 1 Score: 227.639 bits (579), Expect = 5.892e-59 Identity = 113/192 (58.85%), Postives = 138/192 (71.88%), Query Frame = 3 Query: 9 LLDHCFDDMEFMAKNYDKSCINRLRMVASTPFERITYTXXXXXXXXXXKEGKHFENKVEWGIDLASEHERYLTEVKFQKPVIVYNYPKGIKAFYMRLNDDLKTVAAMDVLVPKVGELIGGSQREERYDVIKSRIEDMGLPLEPYEWYLDLRRFGTVKHSGFGLGFERMILFATGIDNIRDVIPFPRYPGRAD 584 +L DD++F K+ DK INRL ++ F +I YT K GK FE V WGIDL+SEHERYL E F+ PV+V NYPK IKAFYMRLN+D KTVAAMDVL P +GE+IGGSQREER DV+ +R+ +MGL E Y WY DLR++GTV HSGFGLGFER+I++ TG+ NIR+VIPFPR P A+ Sbjct: 278 VLKERMDDLKFFEKHIDKDVINRLERFVASDFAQIDYTDAIDVLL---KSGKKFEFPVSWGIDLSSEHERYLAEEHFKSPVVVKNYPKDIKAFYMRLNEDGKTVAAMDVLAPGIGEIIGGSQREERLDVLDARMAEMGLNPEDYWWYRDLRKYGTVPHSGFGLGFERLIVYVTGLQNIREVIPFPRTPRNAN 466
BLAST of FC929367 vs. ExPASy Swiss-Prot
Match: SYN_YERPS (Asparaginyl-tRNA synthetase OS=Yersinia pseudotuberculosis GN=asnS PE=3 SV=1) HSP 1 Score: 227.254 bits (578), Expect = 7.695e-59 Identity = 110/191 (57.59%), Postives = 138/191 (72.25%), Query Frame = 3 Query: 9 LLDHCFDDMEFMAKNYDKSCINRLRMVASTPFERITYTXXXXXXXXXXKEGKHFENKVEWGIDLASEHERYLTEVKFQKPVIVYNYPKGIKAFYMRLNDDLKTVAAMDVLVPKVGELIGGSQREERYDVIKSRIEDMGLPLEPYEWYLDLRRFGTVKHSGFGLGFERMILFATGIDNIRDVIPFPRYPGRA 581 +L+ DDM+F A+ DK ++RL+ ++ F ++ YT G+ FEN V WGIDL+SEHERYL E F+ PV+V NYPK IKAFYMR+N+D KTVAAMDVL P +GE+IGGSQREER DV+ +R+ +MGL E Y WY DLRR+GTV HSGFGLGFER+I + TG+ N+RDVIPFPR P A Sbjct: 277 VLNERADDMKFFAERVDKDAVDRLQRFVTSDFAQVDYTDAIEILLA---SGQKFENDVSWGIDLSSEHERYLAEKHFKAPVVVKNYPKDIKAFYMRMNEDGKTVAAMDVLAPGIGEIIGGSQREERLDVLDARLAEMGLNKEDYWWYRDLRRYGTVPHSGFGLGFERLISYVTGVQNVRDVIPFPRTPRNA 464
BLAST of FC929367 vs. ExPASy Swiss-Prot
Match: SYN_YERPP (Asparaginyl-tRNA synthetase OS=Yersinia pestis (strain Pestoides F) GN=asnS PE=3 SV=1) HSP 1 Score: 227.254 bits (578), Expect = 7.695e-59 Identity = 110/191 (57.59%), Postives = 138/191 (72.25%), Query Frame = 3 Query: 9 LLDHCFDDMEFMAKNYDKSCINRLRMVASTPFERITYTXXXXXXXXXXKEGKHFENKVEWGIDLASEHERYLTEVKFQKPVIVYNYPKGIKAFYMRLNDDLKTVAAMDVLVPKVGELIGGSQREERYDVIKSRIEDMGLPLEPYEWYLDLRRFGTVKHSGFGLGFERMILFATGIDNIRDVIPFPRYPGRA 581 +L+ DDM+F A+ DK ++RL+ ++ F ++ YT G+ FEN V WGIDL+SEHERYL E F+ PV+V NYPK IKAFYMR+N+D KTVAAMDVL P +GE+IGGSQREER DV+ +R+ +MGL E Y WY DLRR+GTV HSGFGLGFER+I + TG+ N+RDVIPFPR P A Sbjct: 277 VLNERADDMKFFAERVDKDAVDRLQRFVTSDFAQVDYTDAIEILLA---SGQKFENDVSWGIDLSSEHERYLAEKHFKAPVVVKNYPKDIKAFYMRMNEDGKTVAAMDVLAPGIGEIIGGSQREERLDVLDARLAEMGLNKEDYWWYRDLRRYGTVPHSGFGLGFERLISYVTGVQNVRDVIPFPRTPRNA 464
BLAST of FC929367 vs. ExPASy Swiss-Prot
Match: SYN_YERPN (Asparaginyl-tRNA synthetase OS=Yersinia pestis bv. Antiqua (strain Nepal516) GN=asnS PE=3 SV=1) HSP 1 Score: 227.254 bits (578), Expect = 7.695e-59 Identity = 110/191 (57.59%), Postives = 138/191 (72.25%), Query Frame = 3 Query: 9 LLDHCFDDMEFMAKNYDKSCINRLRMVASTPFERITYTXXXXXXXXXXKEGKHFENKVEWGIDLASEHERYLTEVKFQKPVIVYNYPKGIKAFYMRLNDDLKTVAAMDVLVPKVGELIGGSQREERYDVIKSRIEDMGLPLEPYEWYLDLRRFGTVKHSGFGLGFERMILFATGIDNIRDVIPFPRYPGRA 581 +L+ DDM+F A+ DK ++RL+ ++ F ++ YT G+ FEN V WGIDL+SEHERYL E F+ PV+V NYPK IKAFYMR+N+D KTVAAMDVL P +GE+IGGSQREER DV+ +R+ +MGL E Y WY DLRR+GTV HSGFGLGFER+I + TG+ N+RDVIPFPR P A Sbjct: 277 VLNERADDMKFFAERVDKDAVDRLQRFVTSDFAQVDYTDAIEILLA---SGQKFENDVSWGIDLSSEHERYLAEKHFKAPVVVKNYPKDIKAFYMRMNEDGKTVAAMDVLAPGIGEIIGGSQREERLDVLDARLAEMGLNKEDYWWYRDLRRYGTVPHSGFGLGFERLISYVTGVQNVRDVIPFPRTPRNA 464 The following BLAST results are available for this feature:
BLAST of FC929367 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 320
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Sequences
The
following sequences are available for this feature:
EST sequence >FC929367 ID=FC929367; Name=FC929367; organism=Citrus clementina; type=EST; length=787bpback to top |