FC929367

Overview
NameFC929367
Unique NameFC929367
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length787
Libraries
Library NameType
PhII-IIIV1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of FC929367 vs. ExPASy Swiss-Prot
Match: SYN_STRPM (Asparaginyl-tRNA synthetase OS=Streptococcus pyogenes serotype M28 GN=asnS PE=3 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 7.024e-28
Identity = 62/168 (36.90%), Postives = 98/168 (58.33%), Query Frame = 3 
Query:   69 INRLRMVASTPFERITYTXXXXXXXXXXKEGKHFENKVEWGIDLASEHERYLTEVKFQKPVIVYNYPKGIKAFYMR-LNDDLKTVAAMDVLVPK-VGELIGGSQREERYDVIKSRIEDMGLPLEPYEWYLDLRRFGTVKHSGFGLGFERMILFATGIDNIRDVIPFPR 566
            +  L+   + PF+R++Y            +       +E G D  S HE +++   F  P  V NYP   KAFYM+ +  + + V   D+L P+  GE+IGGS RE+ YD + ++++++G+    Y++YLDLR++G+V H GFG+G ERM+ F  G  +IR+ IPFPR
Sbjct:  275 VEALKRYITEPFKRVSYDDAITLLQEHEADEDTDYEHLEHGDDFGSPHETWISNY-FGVPTFVVNYPASFKAFYMKPVPGNPERVLCADLLAPEGYGEIIGGSMREDNYDALVAKMDELGMDKSEYDFYLDLRKYGSVPHGGFGIGIERMVTFVAGTKHIREAIPFPR 441
[Close]
BLAST of FC929367 vs. ExPASy Swiss-Prot
Match: SYN_STRPG (Asparaginyl-tRNA synthetase OS=Streptococcus pyogenes serotype M5 (strain Manfredo) GN=asnS PE=3 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 7.024e-28
Identity = 62/168 (36.90%), Postives = 98/168 (58.33%), Query Frame = 3 
Query:   69 INRLRMVASTPFERITYTXXXXXXXXXXKEGKHFENKVEWGIDLASEHERYLTEVKFQKPVIVYNYPKGIKAFYMR-LNDDLKTVAAMDVLVPK-VGELIGGSQREERYDVIKSRIEDMGLPLEPYEWYLDLRRFGTVKHSGFGLGFERMILFATGIDNIRDVIPFPR 566
            +  L+   + PF+R++Y            +       +E G D  S HE +++   F  P  V NYP   KAFYM+ +  + + V   D+L P+  GE+IGGS RE+ YD + ++++++G+    Y++YLDLR++G+V H GFG+G ERM+ F  G  +IR+ IPFPR
Sbjct:  275 VEALKRYITEPFKRVSYDDAITLLQEHEADEDTDYEHLEHGDDFGSPHETWISNY-FGVPTFVVNYPASFKAFYMKPVPGNPERVLCADLLAPEGYGEIIGGSMREDNYDALVAKMDELGMDKSEYDFYLDLRKYGSVPHGGFGIGIERMVTFVAGTKHIREAIPFPR 441
[Close]
BLAST of FC929367 vs. ExPASy Swiss-Prot
Match: SYN_STRPF (Asparaginyl-tRNA synthetase OS=Streptococcus pyogenes serotype M4 (strain MGAS10750) GN=asnS PE=3 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 7.024e-28
Identity = 62/168 (36.90%), Postives = 98/168 (58.33%), Query Frame = 3 
Query:   69 INRLRMVASTPFERITYTXXXXXXXXXXKEGKHFENKVEWGIDLASEHERYLTEVKFQKPVIVYNYPKGIKAFYMR-LNDDLKTVAAMDVLVPK-VGELIGGSQREERYDVIKSRIEDMGLPLEPYEWYLDLRRFGTVKHSGFGLGFERMILFATGIDNIRDVIPFPR 566
            +  L+   + PF+R++Y            +       +E G D  S HE +++   F  P  V NYP   KAFYM+ +  + + V   D+L P+  GE+IGGS RE+ YD + ++++++G+    Y++YLDLR++G+V H GFG+G ERM+ F  G  +IR+ IPFPR
Sbjct:  275 VEALKRYITEPFKRVSYDDAITLLQEHEADEDTDYEHLEHGDDFGSPHETWISNY-FGVPTFVVNYPASFKAFYMKPVPGNPERVLCADLLAPEGYGEIIGGSMREDNYDTLVAKMDELGMDKSEYDFYLDLRKYGSVPHGGFGIGIERMVTFVAGTKHIREAIPFPR 441
[Close]
BLAST of FC929367 vs. ExPASy Swiss-Prot
Match: SYN_STRPD (Asparaginyl-tRNA synthetase OS=Streptococcus pyogenes serotype M2 (strain MGAS10270) GN=asnS PE=3 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 7.024e-28
Identity = 62/168 (36.90%), Postives = 98/168 (58.33%), Query Frame = 3 
Query:   69 INRLRMVASTPFERITYTXXXXXXXXXXKEGKHFENKVEWGIDLASEHERYLTEVKFQKPVIVYNYPKGIKAFYMR-LNDDLKTVAAMDVLVPK-VGELIGGSQREERYDVIKSRIEDMGLPLEPYEWYLDLRRFGTVKHSGFGLGFERMILFATGIDNIRDVIPFPR 566
            +  L+   + PF+R++Y            +       +E G D  S HE +++   F  P  V NYP   KAFYM+ +  + + V   D+L P+  GE+IGGS RE+ YD + ++++++G+    Y++YLDLR++G+V H GFG+G ERM+ F  G  +IR+ IPFPR
Sbjct:  275 VEALKRYITEPFKRVSYDDAITLLQEHEADEDTDYEHLEHGDDFGSPHETWISNY-FGVPTFVVNYPASFKAFYMKPVPGNPERVLCADLLAPEGYGEIIGGSMREDNYDALVAKMDELGMDKSEYDFYLDLRKYGSVPHGGFGIGIERMVTFVAGTKHIREAIPFPR 441
[Close]
BLAST of FC929367 vs. ExPASy Swiss-Prot
Match: SYN_STRPC (Asparaginyl-tRNA synthetase OS=Streptococcus pyogenes serotype M12 (strain MGAS9429) GN=asnS PE=3 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 7.024e-28
Identity = 62/168 (36.90%), Postives = 98/168 (58.33%), Query Frame = 3 
Query:   69 INRLRMVASTPFERITYTXXXXXXXXXXKEGKHFENKVEWGIDLASEHERYLTEVKFQKPVIVYNYPKGIKAFYMR-LNDDLKTVAAMDVLVPK-VGELIGGSQREERYDVIKSRIEDMGLPLEPYEWYLDLRRFGTVKHSGFGLGFERMILFATGIDNIRDVIPFPR 566
            +  L+   + PF+R++Y            +       +E G D  S HE +++   F  P  V NYP   KAFYM+ +  + + V   D+L P+  GE+IGGS RE+ YD + ++++++G+    Y++YLDLR++G+V H GFG+G ERM+ F  G  +IR+ IPFPR
Sbjct:  275 VEALKRYITEPFKRVSYDDAITLLQEHEADEDTDYEHLEHGDDFGSPHETWISNY-FGVPTFVVNYPASFKAFYMKPVPGNPERVLCADLLAPEGYGEIIGGSMREDNYDALVAKMDELGMDKSEYDFYLDLRKYGSVPHGGFGIGIERMVTFVAGTKHIREAIPFPR 441
[Close]
BLAST of FC929367 vs. ExPASy Swiss-Prot
Match: SYN_STRPB (Asparaginyl-tRNA synthetase OS=Streptococcus pyogenes serotype M12 (strain MGAS2096) GN=asnS PE=3 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 7.024e-28
Identity = 62/168 (36.90%), Postives = 98/168 (58.33%), Query Frame = 3 
Query:   69 INRLRMVASTPFERITYTXXXXXXXXXXKEGKHFENKVEWGIDLASEHERYLTEVKFQKPVIVYNYPKGIKAFYMR-LNDDLKTVAAMDVLVPK-VGELIGGSQREERYDVIKSRIEDMGLPLEPYEWYLDLRRFGTVKHSGFGLGFERMILFATGIDNIRDVIPFPR 566
            +  L+   + PF+R++Y            +       +E G D  S HE +++   F  P  V NYP   KAFYM+ +  + + V   D+L P+  GE+IGGS RE+ YD + ++++++G+    Y++YLDLR++G+V H GFG+G ERM+ F  G  +IR+ IPFPR
Sbjct:  275 VEALKRYITEPFKRVSYDDAITLLQEHEADEDTDYEHLEHGDDFGSPHETWISNY-FGVPTFVVNYPASFKAFYMKPVPGNPERVLCADLLAPEGYGEIIGGSMREDNYDALVAKMDELGMDKSEYDFYLDLRKYGSVPHGGFGIGIERMVTFVAGTKHIREAIPFPR 441
[Close]
BLAST of FC929367 vs. ExPASy Swiss-Prot
Match: SYN_STRP8 (Asparaginyl-tRNA synthetase OS=Streptococcus pyogenes serotype M18 GN=asnS PE=3 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 7.024e-28
Identity = 62/168 (36.90%), Postives = 98/168 (58.33%), Query Frame = 3 
Query:   69 INRLRMVASTPFERITYTXXXXXXXXXXKEGKHFENKVEWGIDLASEHERYLTEVKFQKPVIVYNYPKGIKAFYMR-LNDDLKTVAAMDVLVPK-VGELIGGSQREERYDVIKSRIEDMGLPLEPYEWYLDLRRFGTVKHSGFGLGFERMILFATGIDNIRDVIPFPR 566
            +  L+   + PF+R++Y            +       +E G D  S HE +++   F  P  V NYP   KAFYM+ +  + + V   D+L P+  GE+IGGS RE+ YD + ++++++G+    Y++YLDLR++G+V H GFG+G ERM+ F  G  +IR+ IPFPR
Sbjct:  275 VEALKRYITEPFKRVSYDDAITLLQEHEADEDTDYEHLEHGDDFGSPHETWISNY-FGVPTFVVNYPASFKAFYMKPVPGNPERVLCADLLAPEGYGEIIGGSMREDNYDALVAKMDELGMDKSEYDFYLDLRKYGSVPHGGFGIGIERMVTFVAGTKHIREAIPFPR 441
[Close]
BLAST of FC929367 vs. ExPASy Swiss-Prot
Match: SYN_STRP6 (Asparaginyl-tRNA synthetase OS=Streptococcus pyogenes serotype M6 GN=asnS PE=3 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 7.024e-28
Identity = 62/168 (36.90%), Postives = 98/168 (58.33%), Query Frame = 3 
Query:   69 INRLRMVASTPFERITYTXXXXXXXXXXKEGKHFENKVEWGIDLASEHERYLTEVKFQKPVIVYNYPKGIKAFYMR-LNDDLKTVAAMDVLVPK-VGELIGGSQREERYDVIKSRIEDMGLPLEPYEWYLDLRRFGTVKHSGFGLGFERMILFATGIDNIRDVIPFPR 566
            +  L+   + PF+R++Y            +       +E G D  S HE +++   F  P  V NYP   KAFYM+ +  + + V   D+L P+  GE+IGGS RE+ YD + ++++++G+    Y++YLDLR++G+V H GFG+G ERM+ F  G  +IR+ IPFPR
Sbjct:  275 VEALKRYITEPFKRVSYDDAITLLQEHEADEDTDYEHLEHGDDFGSPHETWISNY-FGVPTFVVNYPASFKAFYMKPVPGNPERVLCADLLAPEGYGEIIGGSMREDNYDALVAKMDELGMDKSEYDFYLDLRKYGSVPHGGFGIGIERMVTFVAGTKHIREAIPFPR 441
[Close]
BLAST of FC929367 vs. ExPASy Swiss-Prot
Match: SYN_STRP3 (Asparaginyl-tRNA synthetase OS=Streptococcus pyogenes serotype M3 GN=asnS PE=3 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 7.024e-28
Identity = 62/168 (36.90%), Postives = 98/168 (58.33%), Query Frame = 3 
Query:   69 INRLRMVASTPFERITYTXXXXXXXXXXKEGKHFENKVEWGIDLASEHERYLTEVKFQKPVIVYNYPKGIKAFYMR-LNDDLKTVAAMDVLVPK-VGELIGGSQREERYDVIKSRIEDMGLPLEPYEWYLDLRRFGTVKHSGFGLGFERMILFATGIDNIRDVIPFPR 566
            +  L+   + PF+R++Y            +       +E G D  S HE +++   F  P  V NYP   KAFYM+ +  + + V   D+L P+  GE+IGGS RE+ YD + ++++++G+    Y++YLDLR++G+V H GFG+G ERM+ F  G  +IR+ IPFPR
Sbjct:  275 VEALKRYITEPFKRVSYDDAITLLQEHEADEDTDYEHLEHGDDFGSPHETWISNY-FGVPTFVVNYPASFKAFYMKPVPGNPERVLCADLLAPEGYGEIIGGSMREDNYDALVAKMDELGMDKSEYDFYLDLRKYGSVPHGGFGIGIERMVTFVAGTKHIREAIPFPR 441
[Close]
BLAST of FC929367 vs. ExPASy Swiss-Prot
Match: SYN_STRP1 (Asparaginyl-tRNA synthetase OS=Streptococcus pyogenes serotype M1 GN=asnS PE=3 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 7.024e-28
Identity = 62/168 (36.90%), Postives = 98/168 (58.33%), Query Frame = 3 
Query:   69 INRLRMVASTPFERITYTXXXXXXXXXXKEGKHFENKVEWGIDLASEHERYLTEVKFQKPVIVYNYPKGIKAFYMR-LNDDLKTVAAMDVLVPK-VGELIGGSQREERYDVIKSRIEDMGLPLEPYEWYLDLRRFGTVKHSGFGLGFERMILFATGIDNIRDVIPFPR 566
            +  L+   + PF+R++Y            +       +E G D  S HE +++   F  P  V NYP   KAFYM+ +  + + V   D+L P+  GE+IGGS RE+ YD + ++++++G+    Y++YLDLR++G+V H GFG+G ERM+ F  G  +IR+ IPFPR
Sbjct:  275 VEALKRYITEPFKRVSYDDAITLLQEHEADEDTDYEHLEHGDDFGSPHETWISNY-FGVPTFVVNYPASFKAFYMKPVPGNPERVLCADLLAPEGYGEIIGGSMREDNYDALVAKMDELGMDKSEYDFYLDLRKYGSVPHGGFGIGIERMVTFVAGTKHIREAIPFPR 441
The following BLAST results are available for this feature:
BLAST of FC929367 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 320
Match NameE-valueIdentityDescription
SYN_STRPM7.024e-2836.90Asparaginyl-tRNA synthetase OS=Streptococcus pyoge... [more]
SYN_STRPG7.024e-2836.90Asparaginyl-tRNA synthetase OS=Streptococcus pyoge... [more]
SYN_STRPF7.024e-2836.90Asparaginyl-tRNA synthetase OS=Streptococcus pyoge... [more]
SYN_STRPD7.024e-2836.90Asparaginyl-tRNA synthetase OS=Streptococcus pyoge... [more]
SYN_STRPC7.024e-2836.90Asparaginyl-tRNA synthetase OS=Streptococcus pyoge... [more]
SYN_STRPB7.024e-2836.90Asparaginyl-tRNA synthetase OS=Streptococcus pyoge... [more]
SYN_STRP87.024e-2836.90Asparaginyl-tRNA synthetase OS=Streptococcus pyoge... [more]
SYN_STRP67.024e-2836.90Asparaginyl-tRNA synthetase OS=Streptococcus pyoge... [more]
SYN_STRP37.024e-2836.90Asparaginyl-tRNA synthetase OS=Streptococcus pyoge... [more]
SYN_STRP17.024e-2836.90Asparaginyl-tRNA synthetase OS=Streptococcus pyoge... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAH2BC03RM1 PhII-IIIV1 Citrus clementina cDNA clone KN0AAH2BC03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929367 ID=FC929367; Name=FC929367; organism=Citrus clementina; type=EST; length=787bp
GTGACTGGTTACTTGACCATTGCTTTGACGACATGGAGTTTATGGCTAAA
AATTATGATAAAAGTTGCATTAACCGTCTAAGAATGGTTGCTTCAACTCC
CTTTGAACGCATAACATACACTGAAGCAGTAGAGCTACTAGAGGTTGCTG
TGAAGGAGGGGAAACATTTTGAGAATAAAGTGGAGTGGGGGATTGATTTG
GCATCTGAGCATGAAAGATACTTAACTGAGGTCAAATTTCAGAAGCCTGT
CATTGTGTACAACTATCCAAAAGGAATCAAAGCATTTTACATGAGGCTCA
ATGATGACTTGAAGACTGTGGCAGCTATGGATGTCCTTGTACCTAAGGTA
GGAGAGTTAATTGGTGGGAGCCAAAGGGAAGAGCGTTATGATGTAATCAA
GAGCAGAATAGAGGACATGGGACTCCCTCTTGAACCATACGAGTGGTACC
TTGACCTGCGGCGCTTTGGGACAGTGAAACATAGTGGGTTTGGCTTAGGC
TTTGAACGGATGATTCTTTTTGCCACAGGCATCGACAACATTAGAGATGT
TATCCCCTTCCCAAGATATCCCGGAAGAGCAGATCTCTAATCTTGAATTT
GCAAACATGCCTTTTTGAAAAATCACTAGTTATTACATCTTTTGCTGATT
CCAAACAATGTTAAACCAGGAAACCATAACATTGAAATTTATGTTTGCCA
TATTCTTAATGATAGAGATATTTTCTGGATTTGTCTTCTGCAAGCGTTTA
CGGCGGAATTATGATTTATTATTAGAGAATATATTAA
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