FC929367
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC929367 vs. ExPASy Swiss-Prot
Match: SYN_CLOPS (Asparaginyl-tRNA synthetase OS=Clostridium perfringens (strain SM101 / Type A) GN=asnS PE=3 SV=1) HSP 1 Score: 220.705 bits (561), Expect = 7.202e-57 Identity = 108/193 (55.96%), Postives = 140/193 (72.54%), Query Frame = 3 Query: 6 WLLDHCFDDMEFMAKNYDKSCINRLRMVASTPFERITYTXXXXXXXXXXKEGKHFENKVEWGIDLASEHERYLTEVKFQKPVIVYNYPKGIKAFYMRLNDDLKTVAAMDVLVPKVGELIGGSQREERYDVIKSRIEDMGLPLEPYEWYLDLRRFGTVKHSGFGLGFERMILFATGIDNIRDVIPFPRYPGRAD 584 +++D C +++ F + DK + RL V ++ F ++TYT + GK FE VEWGIDL +EHERYLTE F+KPV V +YPK IKAFYMRLN+D KTVAAMD LVP +GE+IGGSQREER DV+K+R+ ++ L E Y WYL+LR++G HSGFGLGFER+I++ TG+ NIRDVIPFPR G A+ Sbjct: 275 YVMDECPEEIAFFNQFVDKGLLERLNHVVNSEFGKVTYTEAVKLLQ---ESGKEFEYPVEWGIDLQTEHERYLTEQIFKKPVFVTDYPKDIKAFYMRLNEDGKTVAAMDCLVPGIGEIIGGSQREERLDVLKARMAELNLNEEDYWWYLELRKYGETVHSGFGLGFERLIMYITGMANIRDVIPFPRTTGTAE 464
BLAST of FC929367 vs. ExPASy Swiss-Prot
Match: SYN_CLOPE (Asparaginyl-tRNA synthetase OS=Clostridium perfringens GN=asnS PE=3 SV=1) HSP 1 Score: 220.705 bits (561), Expect = 7.202e-57 Identity = 108/193 (55.96%), Postives = 140/193 (72.54%), Query Frame = 3 Query: 6 WLLDHCFDDMEFMAKNYDKSCINRLRMVASTPFERITYTXXXXXXXXXXKEGKHFENKVEWGIDLASEHERYLTEVKFQKPVIVYNYPKGIKAFYMRLNDDLKTVAAMDVLVPKVGELIGGSQREERYDVIKSRIEDMGLPLEPYEWYLDLRRFGTVKHSGFGLGFERMILFATGIDNIRDVIPFPRYPGRAD 584 +++D C +++ F + DK + RL V ++ F ++TYT + GK FE VEWGIDL +EHERYLTE F+KPV V +YPK IKAFYMRLN+D KTVAAMD LVP +GE+IGGSQREER DV+K+R+ ++ L E Y WYL+LR++G HSGFGLGFER+I++ TG+ NIRDVIPFPR G A+ Sbjct: 275 YVMDECPEEIAFFNQFVDKGLLERLNHVVNSEFGKVTYTEAVKLLQ---ESGKEFEYPVEWGIDLQTEHERYLTEQIFKKPVFVTDYPKDIKAFYMRLNEDGKTVAAMDCLVPGIGEIIGGSQREERLDVLKARMAELNLNEEDYWWYLELRKYGETVHSGFGLGFERLIMYITGMANIRDVIPFPRTTGTAE 464
BLAST of FC929367 vs. ExPASy Swiss-Prot
Match: SYN_CLOP1 (Asparaginyl-tRNA synthetase OS=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) GN=asnS PE=3 SV=1) HSP 1 Score: 220.705 bits (561), Expect = 7.202e-57 Identity = 108/193 (55.96%), Postives = 140/193 (72.54%), Query Frame = 3 Query: 6 WLLDHCFDDMEFMAKNYDKSCINRLRMVASTPFERITYTXXXXXXXXXXKEGKHFENKVEWGIDLASEHERYLTEVKFQKPVIVYNYPKGIKAFYMRLNDDLKTVAAMDVLVPKVGELIGGSQREERYDVIKSRIEDMGLPLEPYEWYLDLRRFGTVKHSGFGLGFERMILFATGIDNIRDVIPFPRYPGRAD 584 +++D C +++ F + DK + RL V ++ F ++TYT + GK FE VEWGIDL +EHERYLTE F+KPV V +YPK IKAFYMRLN+D KTVAAMD LVP +GE+IGGSQREER DV+K+R+ ++ L E Y WYL+LR++G HSGFGLGFER+I++ TG+ NIRDVIPFPR G A+ Sbjct: 275 YVMDECPEEIAFFNQFVDKGLLERLNHVVNSEFGKVTYTEAVKLLQ---ESGKEFEYPVEWGIDLQTEHERYLTEQIFKKPVFVTDYPKDIKAFYMRLNEDGKTVAAMDCLVPGIGEIIGGSQREERLDVLKARMAELNLNEEDYWWYLELRKYGETVHSGFGLGFERLIMYITGMANIRDVIPFPRTTGTAE 464
BLAST of FC929367 vs. ExPASy Swiss-Prot
Match: SYN_CYTH3 (Asparaginyl-tRNA synthetase OS=Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469) GN=asnS PE=3 SV=1) HSP 1 Score: 219.935 bits (559), Expect = 1.228e-56 Identity = 106/193 (54.92%), Postives = 136/193 (70.47%), Query Frame = 3 Query: 6 WLLDHCFDDMEFMAKNYDKSCINRLRMVASTPFERITYTXXXXXXXXXXKEGKHFENKVEWGIDLASEHERYLTEVKFQKPVIVYNYPKGIKAFYMRLNDDLKTVAAMDVLVPKVGELIGGSQREERYDVIKSRIEDMGLPLEPYEWYLDLRRFGTVKHSGFGLGFERMILFATGIDNIRDVIPFPRYPGRAD 584 + LD+C DD+ F+ + YDK I RL+ V TPF R+ YT ++ FE KVEWGIDL SEHERYL E F+KPVI+ NYPK IKAFYM+ N+D KTV AMDVL P +GE+IGGSQRE+ + ++ R +++G+ WYL+ R+FG+ HSGFGLGFER++LF TG+ NIRDVIPFPR P A+ Sbjct: 274 YALDNCIDDLNFLNEMYDKELIERLKSVVETPFVRLNYTEAVDILIATKQK---FEYKVEWGIDLQSEHERYLVEKHFKKPVILTNYPKAIKAFYMKANEDGKTVRAMDVLFPGIGEIIGGSQREDNLEKLQERCKEVGIHENDIWWYLETRKFGSAPHSGFGLGFERLMLFVTGMGNIRDVIPFPRTPQSAE 463
BLAST of FC929367 vs. ExPASy Swiss-Prot
Match: SYN_CLOAB (Asparaginyl-tRNA synthetase OS=Clostridium acetobutylicum GN=asnS PE=3 SV=1) HSP 1 Score: 219.935 bits (559), Expect = 1.228e-56 Identity = 108/194 (55.67%), Postives = 141/194 (72.68%), Query Frame = 3 Query: 3 DWLLDHCFDDMEFMAKNYDKSCINRLRMVASTPFERITYTXXXXXXXXXXKEGKHFENKVEWGIDLASEHERYLTEVKFQKPVIVYNYPKGIKAFYMRLNDDLKTVAAMDVLVPKVGELIGGSQREERYDVIKSRIEDMGLPLEPYEWYLDLRRFGTVKHSGFGLGFERMILFATGIDNIRDVIPFPRYPGRAD 584 ++++++ ++MEF DK +RL V ++ F RITYT K G+ FE V+WGIDL +EHERYLT+ F+KP+ V +YPK IKAFYMR+NDD KTVAA D+LVP VGE+IGGSQREER V++ R+E++ L E Y WYL+LR++G KHSG+GLGFERMI++ TGI NIRDVIPFPR G A+ Sbjct: 272 NFVMENAPEEMEFFNTRIDKGLFDRLHNVVNSEFGRITYTEAVDILE---KSGEKFEYPVKWGIDLQTEHERYLTDKVFKKPLFVTDYPKDIKAFYMRINDDNKTVAAADLLVPGVGEIIGGSQREERLAVLEKRMEELNLNKEDYWWYLELRKYGETKHSGYGLGFERMIMYLTGISNIRDVIPFPRTTGSAE 462
BLAST of FC929367 vs. ExPASy Swiss-Prot
Match: SYNO_ARATH (Asparaginyl-tRNA synthetase, chloroplastic/mitochondrial OS=Arabidopsis thaliana GN=SYNO PE=2 SV=3) HSP 1 Score: 219.935 bits (559), Expect = 1.228e-56 Identity = 111/194 (57.22%), Postives = 142/194 (73.20%), Query Frame = 3 Query: 6 WLLDHCFDDMEFMAKNYDKSCINRLRMVASTPFERITYTXXXXXXXXXXKEGKHFENKVEWGIDLASEHERYLTEVKFQ-KPVIVYNYPKGIKAFYMRLNDDLKTVAAMDVLVPKVGELIGGSQREERYDVIKSRIEDMGLPLEPYEWYLDLRRFGTVKHSGFGLGFERMILFATGIDNIRDVIPFPRYPGRAD 584 ++LD+C +DMEF +K I RL VA F ++ YT K K F+ V+WG+DL SEHERY+TE F +PVI+ +YPK IKAFYMR NDD KTVAAMD+LVP++GELIGGSQREER +V+++R++++ L E Y WYLDLRR+G+V H+GFGLGFER++ F TGIDNIRDVIPFPR P A+ Sbjct: 376 YVLDNCKEDMEFFDTWIEKGIIRRLSDVAEKEFLQLGYTDAIEILL---KANKKFDFPVKWGLDLQSEHERYITEEAFGGRPVIIRDYPKEIKAFYMRENDDGKTVAAMDMLVPRIGELIGGSQREERLEVLEARLDELKLNKESYWWYLDLRRYGSVPHAGFGLGFERLVQFVTGIDNIRDVIPFPRTPASAE 566
BLAST of FC929367 vs. ExPASy Swiss-Prot
Match: SYN_XANCP (Asparaginyl-tRNA synthetase OS=Xanthomonas campestris pv. campestris GN=asnS PE=3 SV=1) HSP 1 Score: 219.55 bits (558), Expect = 1.604e-56 Identity = 105/192 (54.69%), Postives = 136/192 (70.83%), Query Frame = 3 Query: 9 LLDHCFDDMEFMAKNYDKSCINRLRMVASTPFERITYTXXXXXXXXXXKEGKHFENKVEWGIDLASEHERYLTEVKFQKPVIVYNYPKGIKAFYMRLNDDLKTVAAMDVLVPKVGELIGGSQREERYDVIKSRIEDMGLPLEPYEWYLDLRRFGTVKHSGFGLGFERMILFATGIDNIRDVIPFPRYPGRAD 584 +LD DD+ F+A+ DK+ I++L + PFE+I YT GK F+ VEWG+DL +EHER+LTE +PV+V NYP+ IKAFYMRLNDD KTVAAMDVL P +GE+IGGSQREER DV+ +R+ GL E Y WY D RR+G+V H+GFGLGFER++++ G+ NIRD IP+PR PG A+ Sbjct: 275 VLDERGDDLAFLAERVDKNAISKLEAFINAPFEQIDYTEAVKLLQ---NSGKKFDFPVEWGLDLQTEHERWLTEEHIGRPVVVTNYPEHIKAFYMRLNDDGKTVAAMDVLAPGIGEIIGGSQREERLDVLDARMAQFGLDKEHYSWYRDFRRYGSVPHAGFGLGFERLVVYVCGLSNIRDAIPYPRAPGSAE 463
BLAST of FC929367 vs. ExPASy Swiss-Prot
Match: SYN_XANC8 (Asparaginyl-tRNA synthetase OS=Xanthomonas campestris pv. campestris (strain 8004) GN=asnS PE=3 SV=1) HSP 1 Score: 219.55 bits (558), Expect = 1.604e-56 Identity = 105/192 (54.69%), Postives = 136/192 (70.83%), Query Frame = 3 Query: 9 LLDHCFDDMEFMAKNYDKSCINRLRMVASTPFERITYTXXXXXXXXXXKEGKHFENKVEWGIDLASEHERYLTEVKFQKPVIVYNYPKGIKAFYMRLNDDLKTVAAMDVLVPKVGELIGGSQREERYDVIKSRIEDMGLPLEPYEWYLDLRRFGTVKHSGFGLGFERMILFATGIDNIRDVIPFPRYPGRAD 584 +LD DD+ F+A+ DK+ I++L + PFE+I YT GK F+ VEWG+DL +EHER+LTE +PV+V NYP+ IKAFYMRLNDD KTVAAMDVL P +GE+IGGSQREER DV+ +R+ GL E Y WY D RR+G+V H+GFGLGFER++++ G+ NIRD IP+PR PG A+ Sbjct: 275 VLDERGDDLAFLAERVDKNAISKLEAFINAPFEQIDYTEAVKLLQ---NSGKKFDFPVEWGLDLQTEHERWLTEEHIGRPVVVTNYPEHIKAFYMRLNDDGKTVAAMDVLAPGIGEIIGGSQREERLDVLDARMAQFGLDKEHYSWYRDFRRYGSVPHAGFGLGFERLVVYVCGLSNIRDAIPYPRAPGSAE 463
BLAST of FC929367 vs. ExPASy Swiss-Prot
Match: SYN_FUSNN (Asparaginyl-tRNA synthetase OS=Fusobacterium nucleatum subsp. nucleatum GN=asnS PE=3 SV=1) HSP 1 Score: 219.55 bits (558), Expect = 1.604e-56 Identity = 105/193 (54.40%), Postives = 140/193 (72.54%), Query Frame = 3 Query: 6 WLLDHCFDDMEFMAKNYDKSCINRLRMVASTPFERITYTXXXXXXXXXXKEGKHFENKVEWGIDLASEHERYLTEVKFQKPVIVYNYPKGIKAFYMRLNDDLKTVAAMDVLVPKVGELIGGSQREERYDVIKSRIEDMGLPLEPYEWYLDLRRFGTVKHSGFGLGFERMILFATGIDNIRDVIPFPRYPGRAD 584 +++D+C ++MEF +K ++L V + F R+TYT K GK FE V+WGIDL SEHERYL E F+KPV V +YPK IKAFYM+LN+D KTV AMD+L P +GE+IGGSQRE+ Y+++ R++++GL E YE+YLDLRRFG+ HSG+GLGFERM+++ TG+ NIRDVIPFPR P A+ Sbjct: 271 YVMDNCPEEMEFFNSFIEKGLFDKLNNVLNNDFGRVTYTEAIEILE---KSGKKFEFPVKWGIDLQSEHERYLAEEYFKKPVFVTDYPKDIKAFYMKLNEDNKTVRAMDLLAPGIGEIIGGSQREDNYELLTKRMKELGLNEEDYEFYLDLRRFGSFPHSGYGLGFERMMMYLTGMQNIRDVIPFPRTPNNAE 460
BLAST of FC929367 vs. ExPASy Swiss-Prot
Match: SYN_BACHK (Asparaginyl-tRNA synthetase OS=Bacillus thuringiensis subsp. konkukian GN=asnS PE=3 SV=1) HSP 1 Score: 219.55 bits (558), Expect = 1.604e-56 Identity = 107/193 (55.44%), Postives = 141/193 (73.06%), Query Frame = 3 Query: 6 WLLDHCFDDMEFMAKNYDKSCINRLRMVASTPFERITYTXXXXXXXXXXKEGKHFENKVEWGIDLASEHERYLTEVKFQKPVIVYNYPKGIKAFYMRLNDDLKTVAAMDVLVPKVGELIGGSQREERYDVIKSRIEDMGLPLEPYEWYLDLRRFGTVKHSGFGLGFERMILFATGIDNIRDVIPFPRYPGRAD 584 ++L+H ++MEF DK+ + R+ V ++ F RITYT + G F+ VEWGIDL +EHERYL+E F++PV V +YPK IKAFYMRLNDD KTVAA D+LVP +GELIGGSQREER DV+ RI+++G+ E Y WYL+LR++G KH+GFGLGFER +++ TG+ NIRDVIPFPR PG ++ Sbjct: 273 YVLEHAPEEMEFFNSFVDKTVLERMNNVINSDFGRITYTEAIKVLQ---ESGADFKYPVEWGIDLQTEHERYLSEEIFKRPVFVTDYPKDIKAFYMRLNDDGKTVAATDLLVPGIGELIGGSQREERMDVLVDRIKELGMNEEDYWWYLELRKYGGTKHAGFGLGFERFLMYITGMANIRDVIPFPRTPGSSE 462 The following BLAST results are available for this feature:
BLAST of FC929367 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 320
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Sequences
The
following sequences are available for this feature:
EST sequence >FC929367 ID=FC929367; Name=FC929367; organism=Citrus clementina; type=EST; length=787bpback to top |