FC929391

Overview
NameFC929391
Unique NameFC929391
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length550
Libraries
Library NameType
PhII-IIIV1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC929391 vs. ExPASy Swiss-Prot
Match: PPI2_SYNY3 (Peptidyl-prolyl cis-trans isomerase slr1251 OS=Synechocystis sp. (strain PCC 6803) GN=slr1251 PE=3 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 2.484e-29
Identity = 57/93 (61.29%), Postives = 73/93 (78.49%), Query Frame = 1
Query:    1 GTGGESVYGS*FADENFVKKHTGPGILSMANAGPGTNGSHFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKPVVIADCGQL 279
            GTGGES+YG  FADENF  KH  PG+LSMANAGP TNGS FF+      WLDGKHVVFG+VVEG+++++ +E  GS SG+T + +VI+DCG++
Sbjct:   78 GTGGESIYGEKFADENFQLKHDRPGLLSMANAGPNTNGSQFFLTFVPCPWLDGKHVVFGEVVEGLEILEQLEANGSQSGQTKQAIVISDCGEI 170          
BLAST of FC929391 vs. ExPASy Swiss-Prot
Match: CP19D_ARATH (Peptidyl-prolyl cis-trans isomerase CYP19-4 OS=Arabidopsis thaliana GN=CYP19-4 PE=1 SV=2)

HSP 1 Score: 128.257 bits (321), Expect = 2.484e-29
Identity = 61/93 (65.59%), Postives = 69/93 (74.19%), Query Frame = 1
Query:    1 GTGGESVYGS*FADENFVKKHTGPGILSMANAGPGTNGSHFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKPVVIADCGQL 279
            G GGES+YG  FADENF  KHTGPG+LSMAN+G  TNGS FF+ T  T WLDG+HVVFG+VV+GMDVV  IE  G  SG     VVIAD G+L
Sbjct:  107 GMGGESIYGQKFADENFKLKHTGPGVLSMANSGEDTNGSQFFITTVTTSWLDGRHVVFGKVVQGMDVVYKIEAEGKQSGTPKSKVVIADSGEL 199          
BLAST of FC929391 vs. ExPASy Swiss-Prot
Match: PPIB_DICDI (Peptidyl-prolyl cis-trans isomerase B OS=Dictyostelium discoideum GN=cypB PE=1 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 7.226e-29
Identity = 57/93 (61.29%), Postives = 71/93 (76.34%), Query Frame = 1
Query:    1 GTGGESVYGS*FADENFVKKHTGPGILSMANAGPGTNGSHFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKPVVIADCGQL 279
            GTGGES+YG  F DENF  KH+ PG+LSMANAGP TNGS FF+ T  T WLDG+H VFG+V+EGMD+VK +E +GS SG  +K   I++ G+L
Sbjct:  105 GTGGESIYGKKFNDENFKIKHSKPGLLSMANAGPNTNGSQFFITTVVTSWLDGRHTVFGEVIEGMDIVKLLESIGSQSGTPSKIAKISNSGEL 197          
BLAST of FC929391 vs. ExPASy Swiss-Prot
Match: PPIB_CRYNE (Peptidyl-prolyl cis-trans isomerase B OS=Cryptococcus neoformans GN=CPR2 PE=3 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 7.226e-29
Identity = 61/94 (64.89%), Postives = 73/94 (77.66%), Query Frame = 1
Query:    1 GTGGESVYGS*FADENFVKKHTGPGILSMANAGPGTNGSHFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSG-RTNKPVVIADCGQL 279
            GTGG+S+YGS F DENF  KHTGPG+LSMANAG  TNGS FF+CT KT WLD +HVVFG V+EGMDVV A+E V +S G +  +P+ IA  G+L
Sbjct:  119 GTGGKSIYGSKFPDENFKLKHTGPGVLSMANAGRDTNGSQFFICTVKTAWLDNRHVVFGHVLEGMDVVYAMENVKTSRGDKPVEPITIAASGEL 212          
BLAST of FC929391 vs. ExPASy Swiss-Prot
Match: CYPH_NEUCR (Peptidyl-prolyl cis-trans isomerase, mitochondrial OS=Neurospora crassa GN=NCU00726 PE=1 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 9.438e-29
Identity = 64/97 (65.98%), Postives = 71/97 (73.20%), Query Frame = 1
Query:    1 GTGGESVYGS*FADENFVKKHTGPGILSMANAGPGTNGSHFFVCTAKTEWLDGKHVVFGQVV--EGMDVVKAIEKVGSSSG--RTNKPVVIADCGQL 279
            GTGG+S+YG  FADENF KKH  PG+LSMANAGP TNGS FFV T  T WLDG+HVVFG+V   E M VVKA+E  GSSSG  R +K   I DCG L
Sbjct:  127 GTGGKSIYGEKFADENFAKKHVRPGLLSMANAGPNTNGSQFFVTTVPTSWLDGRHVVFGEVADDESMKVVKALEATGSSSGAIRYSKKPTIVDCGAL 223          
BLAST of FC929391 vs. ExPASy Swiss-Prot
Match: PPIB2_RHIOR (Peptidyl-prolyl cis-trans isomerase B2 OS=Rhizopus oryzae GN=cyp9 PE=3 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 1.233e-28
Identity = 62/95 (65.26%), Postives = 73/95 (76.84%), Query Frame = 1
Query:    1 GTGGESVYGS*FADENFVKKHTGPGILSMANAGPGTNGSHFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSS-SGRTNKPVVIADCGQLS 282
            GTGG+S+YGS F DENF  +HT PG+LSMANAGP +NGS FF+ T  T WLDGKHVVFG+V+EGMDVV  IEK  ++   + N  VVIADCG LS
Sbjct:  102 GTGGKSIYGSRFPDENFKLRHTVPGLLSMANAGPDSNGSQFFITTVVTSWLDGKHVVFGKVLEGMDVVTKIEKTPTNYRSKPNVDVVIADCGLLS 196          
BLAST of FC929391 vs. ExPASy Swiss-Prot
Match: CYPH_YEAST (Peptidyl-prolyl cis-trans isomerase OS=Saccharomyces cerevisiae GN=CPR1 PE=1 SV=3)

HSP 1 Score: 125.561 bits (314), Expect = 1.610e-28
Identity = 57/93 (61.29%), Postives = 69/93 (74.19%), Query Frame = 1
Query:    1 GTGGESVYGS*FADENFVKKHTGPGILSMANAGPGTNGSHFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKPVVIADCGQL 279
            GTGG+S+YG  F DENF K H  PG+LSMANAGP TNGS FF+ T    WLDGKHVVFG+VV+G D+VK +E +GS SG T   +V+A  G+L
Sbjct:   70 GTGGKSIYGGKFPDENFKKHHDRPGLLSMANAGPNTNGSQFFITTVPCPWLDGKHVVFGEVVDGYDIVKKVESLGSPSGATKARIVVAKSGEL 162          
BLAST of FC929391 vs. ExPASy Swiss-Prot
Match: CP20A_ARATH (Peptidyl-prolyl cis-trans isomerase CYP20-1 OS=Arabidopsis thaliana GN=CYP20-1 PE=1 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 1.610e-28
Identity = 60/93 (64.52%), Postives = 67/93 (72.04%), Query Frame = 1
Query:    1 GTGGESVYGS*FADENFVKKHTGPGILSMANAGPGTNGSHFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKPVVIADCGQL 279
            G GGES+YG  FADENF  KHTGPG LSMANAG  TNGS FF+ T  T WLDG+HVVFG+VV GMDVV  +E  G+ SG     VVI D G+L
Sbjct:  110 GMGGESIYGEKFADENFKLKHTGPGFLSMANAGQDTNGSQFFITTVTTSWLDGRHVVFGKVVTGMDVVYKVEAEGNQSGTPKSKVVIVDSGEL 202          
BLAST of FC929391 vs. ExPASy Swiss-Prot
Match: CYPX_USEUD (Peptidyl-prolyl cis-trans isomerase OS=Unspecified eudicot DB-1992 PE=2 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 2.103e-28
Identity = 64/96 (66.67%), Postives = 74/96 (77.08%), Query Frame = 1
Query:    1 GTGGESVYGS*FADENFVKKHTGPGILSMANAGPGTNGSHFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKP---VVIADCGQL 279
            G GGES+YG+ FADENF+ KHT PG+LSMANAGPGTNGS FF+ T  T  LDGKHVVFG+VVEGMDVV+ IE   + + R +KP   V IA CGQL
Sbjct:   76 GRGGESIYGAKFADENFIHKHTTPGLLSMANAGPGTNGSQFFITTVATPHLDGKHVVFGKVVEGMDVVRKIE--ATQTDRGDKPLSEVKIAKCGQL 169          
BLAST of FC929391 vs. ExPASy Swiss-Prot
Match: PPIA2_RHIOR (Peptidyl-prolyl cis-trans isomerase A2 OS=Rhizopus oryzae GN=cyp1 PE=3 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 1.043e-27
Identity = 57/93 (61.29%), Postives = 68/93 (73.12%), Query Frame = 1
Query:    1 GTGGESVYGS*FADENFVKKHTGPGILSMANAGPGTNGSHFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKPVVIADCGQL 279
            GTGG+S+YG  FADENF  KH+ PG+LSMANAGP TNGS FF+ T    WLDG HVVFG+V + M++V  IE +GS+SG     VVI DCG L
Sbjct:   69 GTGGKSIYGEKFADENFKLKHSEPGLLSMANAGPNTNGSQFFITTVPCSWLDGAHVVFGKVTKNMELVSKIESLGSASGAVKAKVVIEDCGVL 161          
The following BLAST results are available for this feature:
BLAST of FC929391 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 193
Match NameE-valueIdentityDescription
PPI2_SYNY32.484e-2961.29Peptidyl-prolyl cis-trans isomerase slr1251 OS=Syn... [more]
CP19D_ARATH2.484e-2965.59Peptidyl-prolyl cis-trans isomerase CYP19-4 OS=Ara... [more]
PPIB_DICDI7.226e-2961.29Peptidyl-prolyl cis-trans isomerase B OS=Dictyoste... [more]
PPIB_CRYNE7.226e-2964.89Peptidyl-prolyl cis-trans isomerase B OS=Cryptococ... [more]
CYPH_NEUCR9.438e-2965.98Peptidyl-prolyl cis-trans isomerase, mitochondrial... [more]
PPIB2_RHIOR1.233e-2865.26Peptidyl-prolyl cis-trans isomerase B2 OS=Rhizopus... [more]
CYPH_YEAST1.610e-2861.29Peptidyl-prolyl cis-trans isomerase OS=Saccharomyc... [more]
CP20A_ARATH1.610e-2864.52Peptidyl-prolyl cis-trans isomerase CYP20-1 OS=Ara... [more]
CYPX_USEUD2.103e-2866.67Peptidyl-prolyl cis-trans isomerase OS=Unspecified... [more]
PPIA2_RHIOR1.043e-2761.29Peptidyl-prolyl cis-trans isomerase A2 OS=Rhizopus... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAH2BE11RM1 PhII-IIIV1 Citrus clementina cDNA clone KN0AAH2BE11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929391 ID=FC929391; Name=FC929391; organism=Citrus clementina; type=EST; length=550bp
GGAACCGGAGGCGAATCAGTCTACGGCTCATAATTCGCCGATGAGAACTT
CGTGAAGAAGCACACCGGCCCCGGAATCCTCTCCATGGCGAATGCCGGAC
CCGGAACCAACGGATCTCATTTCTTCGTCTGTACGGCCAAGACCGAGTGG
CTCGATGGGAAGCACGTTGTGTTCGGTCAAGTCGTCGAAGGAATGGACGT
CGTCAAGGCCATCGAGAAAGTGGGGTCCAGCTCCGGAAGGACCAACAAGC
CCGTCGTGATCGCTGATTGCGGTCAATTGTCTTATATTTGATCATGATAA
TGATCGCCATCATCACGAGCCGTCTGATCGCGATCGTGATGGTGATTATG
TTATCTATTATTATGTGGCCGTGTCTGTAGGACTTTTAATCTTTATCTAA
TTTTCCTGCTATGTTACTTGTTCGGGTTGGATCGGGTCTCCGGTGGTGGT
TCTTGATGAACTGTTTTTTATGTCTTTCTATGAGCTGCCTTTTTAAATAA
GATAGGGCTTGTCTTGTTATATTACATAAAAAAAAACAAAAAAGAAGAGA
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