FC929426

Overview
NameFC929426
Unique NameFC929426
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length550
Libraries
Library NameType
PhII-IIIV1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC929426 vs. ExPASy Swiss-Prot
Match: PPIL1_NEUCR (Peptidyl-prolyl cis-trans isomerase-like 1 OS=Neurospora crassa GN=cyp-1 PE=3 SV=2)

HSP 1 Score: 95.5153 bits (236), Expect = 1.784e-19
Identity = 46/75 (61.33%), Postives = 54/75 (72.00%), Query Frame = 1
Query:    1 GTGGESIYGSKFADENFVK-KHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKV 222
            G GG SIYG KF DE     KHTG G+LSMANAGP TNGSQFF+  A T WLDGKH +FG+V +GM V++ +  V
Sbjct:   62 GRGGSSIYGEKFEDEIHPGLKHTGAGVLSMANAGPNTNGSQFFITLAPTPWLDGKHTIFGRVKKGMGVIRRMGMV 136          
BLAST of FC929426 vs. ExPASy Swiss-Prot
Match: PPIL1_ASPFU (Peptidyl-prolyl cis-trans isomerase-like 1 OS=Aspergillus fumigatus GN=cyp1 PE=3 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 3.974e-19
Identity = 46/79 (58.23%), Postives = 56/79 (70.89%), Query Frame = 1
Query:    1 GTGGESIYGSKFADENFVK-KHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSS 234
            G GG SIYG KF DE     KHTG G+LSMAN+GP TNGSQFF+  A T WLDGKH +FG+V  GM V++ +  V ++S
Sbjct:   62 GRGGSSIYGEKFEDEIHPGLKHTGAGVLSMANSGPNTNGSQFFITLAPTPWLDGKHTIFGRVKSGMRVIQRMGLVKTNS 140          
BLAST of FC929426 vs. ExPASy Swiss-Prot
Match: PPIL1_ASPOR (Peptidyl-prolyl cis-trans isomerase-like 1 OS=Aspergillus oryzae GN=cyp1 PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 5.191e-19
Identity = 46/70 (65.71%), Postives = 51/70 (72.86%), Query Frame = 1
Query:    1 GTGGESIYGSKFADENFVK-KHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVK 207
            G GG SIYG KF DE     KHTG GILSMAN+GP TNGSQFFV  A T WLDGKH +FG+V  GM V++
Sbjct:   62 GRGGSSIYGEKFEDEIRADLKHTGAGILSMANSGPNTNGSQFFVTLAPTPWLDGKHTIFGRVKSGMRVIQ 131          
BLAST of FC929426 vs. ExPASy Swiss-Prot
Match: PPIG_RAT (Peptidyl-prolyl cis-trans isomerase G OS=Rattus norvegicus GN=Ppig PE=1 SV=2)

HSP 1 Score: 93.9745 bits (232), Expect = 5.191e-19
Identity = 51/96 (53.12%), Postives = 60/96 (62.50%), Query Frame = 1
Query:    1 GTGGESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKP---VVIADCGQL 279
            G GGESIYG  F DE+F  KH    +LSMAN G  TNGSQFF+ T  T  LDG HVVFGQV+ G +VV+ IE     +   +KP   V I  CG+L
Sbjct:   84 GRGGESIYGGFFEDESFAVKHNKEFLLSMANRGKDTNGSQFFITTKPTPHLDGHHVVFGQVISGQEVVREIE--NQKTDAASKPFAEVRILSCGEL 177          
BLAST of FC929426 vs. ExPASy Swiss-Prot
Match: PPIG_MOUSE (Peptidyl-prolyl cis-trans isomerase G OS=Mus musculus GN=Ppig PE=1 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 5.191e-19
Identity = 51/96 (53.12%), Postives = 60/96 (62.50%), Query Frame = 1
Query:    1 GTGGESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKP---VVIADCGQL 279
            G GGESIYG  F DE+F  KH    +LSMAN G  TNGSQFF+ T  T  LDG HVVFGQV+ G +VV+ IE     +   +KP   V I  CG+L
Sbjct:   84 GRGGESIYGGFFEDESFAVKHNKEFLLSMANRGKDTNGSQFFITTKPTPHLDGHHVVFGQVISGQEVVREIE--NQKTDAASKPFAEVRILSCGEL 177          
BLAST of FC929426 vs. ExPASy Swiss-Prot
Match: PPIG_HUMAN (Peptidyl-prolyl cis-trans isomerase G OS=Homo sapiens GN=PPIG PE=1 SV=2)

HSP 1 Score: 93.9745 bits (232), Expect = 5.191e-19
Identity = 51/96 (53.12%), Postives = 60/96 (62.50%), Query Frame = 1
Query:    1 GTGGESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKP---VVIADCGQL 279
            G GGESIYG  F DE+F  KH    +LSMAN G  TNGSQFF+ T  T  LDG HVVFGQV+ G +VV+ IE     +   +KP   V I  CG+L
Sbjct:   84 GRGGESIYGGFFEDESFAVKHNKEFLLSMANRGKDTNGSQFFITTKPTPHLDGHHVVFGQVISGQEVVREIE--NQKTDAASKPFAEVRILSCGEL 177          
BLAST of FC929426 vs. ExPASy Swiss-Prot
Match: PPIL1_SCHPO (Peptidyl-prolyl cis-trans isomerase ppi1 OS=Schizosaccharomyces pombe GN=ppi1 PE=1 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 6.779e-19
Identity = 50/89 (56.18%), Postives = 60/89 (67.42%), Query Frame = 1
Query:    1 GTGGESIYGSKFADE-NFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGS-SSGRTNKPVVI 261
            G GG SIYG KF DE +    HTG GILSMANAGP TN SQFF+  A T WLDGKH +FG+VV G+ V K +  + + SS R  +P+ I
Sbjct:   61 GRGGTSIYGDKFDDEIHSDLHHTGAGILSMANAGPNTNSSQFFITLAPTPWLDGKHTIFGRVVSGLSVCKRMGLIRTDSSDRPIEPLKI 149          
BLAST of FC929426 vs. ExPASy Swiss-Prot
Match: PPIL1_EMENI (Peptidyl-prolyl cis-trans isomerase-like 1 OS=Emericella nidulans GN=cyp1 PE=3 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 6.779e-19
Identity = 45/79 (56.96%), Postives = 56/79 (70.89%), Query Frame = 1
Query:    1 GTGGESIYGSKFADE-NFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSS 234
            G GG SIYG KF DE     KHTG GILSMAN+GP TNGSQFF+  A T WLDGKH +FG+V  GM +++ +  V +++
Sbjct:   62 GRGGSSIYGEKFEDEIRSDLKHTGAGILSMANSGPNTNGSQFFITLAPTPWLDGKHTIFGRVKSGMRIIQRMGLVKTNN 140          
BLAST of FC929426 vs. ExPASy Swiss-Prot
Match: NKTR_MOUSE (NK-tumor recognition protein OS=Mus musculus GN=Nktr PE=1 SV=3)

HSP 1 Score: 93.5893 bits (231), Expect = 6.779e-19
Identity = 48/95 (50.53%), Postives = 61/95 (64.21%), Query Frame = 1
Query:    1 GTGGESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGS-SSGRTNKPVVIADCGQLS 282
            G GGESIYG  F DENF+ KH    +LSMAN G  TNGSQFF+ T     LDG HVVFG V+ G +V++ IE + + ++ R    V + DCG L+
Sbjct:   83 GKGGESIYGGYFKDENFILKHDRAFLLSMANRGKHTNGSQFFITTKPAPHLDGVHVVFGLVISGFEVIEQIENLKTDAASRPYADVRVIDCGVLA 177          
BLAST of FC929426 vs. ExPASy Swiss-Prot
Match: NKTR_HUMAN (NK-tumor recognition protein OS=Homo sapiens GN=NKTR PE=1 SV=2)

HSP 1 Score: 93.5893 bits (231), Expect = 6.779e-19
Identity = 48/95 (50.53%), Postives = 61/95 (64.21%), Query Frame = 1
Query:    1 GTGGESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGS-SSGRTNKPVVIADCGQLS 282
            G GGESIYG  F DENF+ KH    +LSMAN G  TNGSQFF+ T     LDG HVVFG V+ G +V++ IE + + ++ R    V + DCG L+
Sbjct:   83 GKGGESIYGGYFKDENFILKHDRAFLLSMANRGKHTNGSQFFITTKPAPHLDGVHVVFGLVISGFEVIEQIENLKTDAASRPYADVRVIDCGVLA 177          
The following BLAST results are available for this feature:
BLAST of FC929426 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 199
Match NameE-valueIdentityDescription
PPIL1_NEUCR1.784e-1961.33Peptidyl-prolyl cis-trans isomerase-like 1 OS=Neur... [more]
PPIL1_ASPFU3.974e-1958.23Peptidyl-prolyl cis-trans isomerase-like 1 OS=Aspe... [more]
PPIL1_ASPOR5.191e-1965.71Peptidyl-prolyl cis-trans isomerase-like 1 OS=Aspe... [more]
PPIG_RAT5.191e-1953.13Peptidyl-prolyl cis-trans isomerase G OS=Rattus no... [more]
PPIG_MOUSE5.191e-1953.13Peptidyl-prolyl cis-trans isomerase G OS=Mus muscu... [more]
PPIG_HUMAN5.191e-1953.13Peptidyl-prolyl cis-trans isomerase G OS=Homo sapi... [more]
PPIL1_SCHPO6.779e-1956.18Peptidyl-prolyl cis-trans isomerase ppi1 OS=Schizo... [more]
PPIL1_EMENI6.779e-1956.96Peptidyl-prolyl cis-trans isomerase-like 1 OS=Emer... [more]
NKTR_MOUSE6.779e-1950.53NK-tumor recognition protein OS=Mus musculus GN=Nk... [more]
NKTR_HUMAN6.779e-1950.53NK-tumor recognition protein OS=Homo sapiens GN=NK... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAH2CA03RM1 PhII-IIIV1 Citrus clementina cDNA clone KN0AAH2CA03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929426 ID=FC929426; Name=FC929426; organism=Citrus clementina; type=EST; length=550bp
GGAACCGGAGGCGAATCAATCTACGGCTCAAAATTCGCCGATGAGAACTT
CGTGAAGAAGCACACCGGCCCCGGAATCCTCTCCATGGCGAATGCCGGAC
CCGGAACCAACGGATCTCAGTTCTTCGTCTGTACGGCCAAGACCGAGTGG
CTCGATGGGAAGCACGTTGTGTTCGGTCAAGTCGTCGAAGGAATGGACGT
CGTCAAGGCCATCGAGAAAGTGGGGTCCAGCTCCGGAAGGACCAACAAGC
CCGTCGTGATCGCTGATTGCGGTCAATTGTCTTAGATTTGATCATGATAA
TGATCGCCATCATCACGAGCCGTCTGATCGCGATCGTGATGGTGATTATG
TTATCTATTATTATGTGGCCGTGTCTGTAGGACTTTTAATCTTTATCTAA
TTTTCCTGCTATGTTACTTGTTCGGGTTGGATCGGGTCTCCGGTGGTGGT
TCTTGATGAACTGTTTTTTATGTCTTTCTATGAGCTGCCTTTTTAAATAA
GATAGGGCTTGTCTTGTTATATTACATAAAAAAAAAAAAAAAAAAAAAAA
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