FC929426

Overview
NameFC929426
Unique NameFC929426
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length550
Libraries
Library NameType
PhII-IIIV1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC929426 vs. ExPASy Swiss-Prot
Match: CYP15_RHIOR (Peptidyl-prolyl cis-trans isomerase cyp15 OS=Rhizopus oryzae GN=cyp15 PE=3 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 6.779e-19
Identity = 49/86 (56.98%), Postives = 59/86 (68.60%), Query Frame = 1
Query:    1 GTGGESIYGSKFADENFVK-KHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKPV 255
            GTGGESI+G  F DE   + +H  P  +SMANAGP TNGSQFF+  A T WLD KH VFG+V  GMDVV +IE   +   +TNKP+
Sbjct:  536 GTGGESIWGDDFEDEFSREFRHDRPYTVSMANAGPNTNGSQFFITVAPTTWLDNKHSVFGRVTAGMDVVHSIE--SAKVDKTNKPL 619          
BLAST of FC929426 vs. ExPASy Swiss-Prot
Match: CYPE_DICDI (Peptidyl-prolyl cis-trans isomerase cypE OS=Dictyostelium discoideum GN=cypE PE=1 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 1.156e-18
Identity = 46/86 (53.49%), Postives = 58/86 (67.44%), Query Frame = 1
Query:    1 GTGGESIYGSKFADENFVK-KHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKPV 255
            G GGESIYG KF DE   + KHTG GILSMAN+G  +NGSQFF+    T WLDGKH +FG+V  GM   K ++K+ +     +KP+
Sbjct:   63 GRGGESIYGKKFEDEITKELKHTGAGILSMANSGVNSNGSQFFITFGPTPWLDGKHTIFGRVKSGM---KVVQKMNAMQTNNDKPI 145          
BLAST of FC929426 vs. ExPASy Swiss-Prot
Match: PPIL1_ASPNG (Peptidyl-prolyl cis-trans isomerase-like 1 OS=Aspergillus niger GN=cypC PE=3 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 1.510e-18
Identity = 46/79 (58.23%), Postives = 55/79 (69.62%), Query Frame = 1
Query:    1 GTGGESIYGSKFADE-NFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSS 234
            G GG SIYG KF DE N   KHTG GILSMAN+GP  NGSQFF+  A   WLDGKH +FG+V  GM V++ +  V ++S
Sbjct:   62 GRGGSSIYGEKFEDEINPNLKHTGAGILSMANSGPNNNGSQFFITLAPQPWLDGKHTIFGRVKSGMRVIQRMGLVKTNS 140          
BLAST of FC929426 vs. ExPASy Swiss-Prot
Match: PPIL1_MOUSE (Peptidyl-prolyl cis-trans isomerase-like 1 OS=Mus musculus GN=Ppil1 PE=2 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 4.394e-18
Identity = 45/79 (56.96%), Postives = 56/79 (70.89%), Query Frame = 1
Query:    1 GTGGESIYGSKFADENFVK-KHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSS 234
            G GG SIYG +F DE     K TG GIL+MANAGP TNGSQFFV  A T+WLDGKH +FG+V +G+ +V  +  V ++S
Sbjct:   71 GRGGASIYGKQFEDELHPDLKFTGAGILAMANAGPDTNGSQFFVTLAPTQWLDGKHTIFGRVCQGIGMVNRVGMVETNS 149          
BLAST of FC929426 vs. ExPASy Swiss-Prot
Match: PPIL1_HUMAN (Peptidyl-prolyl cis-trans isomerase-like 1 OS=Homo sapiens GN=PPIL1 PE=1 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 4.394e-18
Identity = 45/79 (56.96%), Postives = 56/79 (70.89%), Query Frame = 1
Query:    1 GTGGESIYGSKFADENFVK-KHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSS 234
            G GG SIYG +F DE     K TG GIL+MANAGP TNGSQFFV  A T+WLDGKH +FG+V +G+ +V  +  V ++S
Sbjct:   71 GRGGASIYGKQFEDELHPDLKFTGAGILAMANAGPDTNGSQFFVTLAPTQWLDGKHTIFGRVCQGIGMVNRVGMVETNS 149          
BLAST of FC929426 vs. ExPASy Swiss-Prot
Match: PPIL1_BOVIN (Peptidyl-prolyl cis-trans isomerase-like 1 OS=Bos taurus GN=PPIL1 PE=2 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 4.394e-18
Identity = 45/79 (56.96%), Postives = 56/79 (70.89%), Query Frame = 1
Query:    1 GTGGESIYGSKFADENFVK-KHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSS 234
            G GG SIYG +F DE     K TG GIL+MANAGP TNGSQFFV  A T+WLDGKH +FG+V +G+ +V  +  V ++S
Sbjct:   71 GRGGASIYGKQFEDELHPDLKFTGAGILAMANAGPDTNGSQFFVTLAPTQWLDGKHTIFGRVCQGIGMVNRVGMVETNS 149          
BLAST of FC929426 vs. ExPASy Swiss-Prot
Match: PPIB_TREPA (Probable peptidyl-prolyl cis-trans isomerase OS=Treponema pallidum GN=ppiB PE=1 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 7.495e-18
Identity = 46/72 (63.89%), Postives = 53/72 (73.61%), Query Frame = 1
Query:    1 GTGGESIYGSKFADE-NFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAI 213
            GTGG    G +F DE +   +H  PG+LSMANAGPGTNGSQFF+    T WLDGKH VFG+VVEGM+VV AI
Sbjct:  107 GTGGP---GYQFPDECDPALRHDSPGVLSMANAGPGTNGSQFFITHVATPWLDGKHTVFGKVVEGMEVVHAI 175          
BLAST of FC929426 vs. ExPASy Swiss-Prot
Match: CYP9_CAEEL (Peptidyl-prolyl cis-trans isomerase 9 OS=Caenorhabditis elegans GN=cyn-9 PE=2 SV=3)

HSP 1 Score: 90.1225 bits (222), Expect = 7.495e-18
Identity = 46/94 (48.94%), Postives = 61/94 (64.89%), Query Frame = 1
Query:    1 GTGGESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVG-SSSGRTNKPVVIADCGQL 279
            G GG SIYG  F DE F  KH+ P +LSMAN GP +N SQFF+ TA     +GKHVVFG+VV+G +VV  I+ +      +    V+I++CG+L
Sbjct:   81 GRGGFSIYGRYFDDEKFKLKHSRPYLLSMANKGPNSNSSQFFITTAAAPHCNGKHVVFGEVVKGQNVVDYIDNLAVDDKSKPLAKVLISNCGEL 174          
BLAST of FC929426 vs. ExPASy Swiss-Prot
Match: PPWD1_PONAB (Peptidylprolyl isomerase domain and WD repeat-containing protein 1 OS=Pongo abelii GN=PPWD1 PE=2 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 4.858e-17
Identity = 45/85 (52.94%), Postives = 57/85 (67.06%), Query Frame = 1
Query:    1 GTGGESIYGSKFADE-NFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKP 252
            G GGESI+G +F DE +   +H  P  LSMANAG  TNGSQFF+    T WLD KH VFG+V +GM+VV+ I  V   + +T+KP
Sbjct:  551 GMGGESIWGGEFEDEFHSTLRHDRPYTLSMANAGSNTNGSQFFITVVPTPWLDNKHTVFGRVTKGMEVVQRISNV-KVNPKTDKP 634          
BLAST of FC929426 vs. ExPASy Swiss-Prot
Match: PPWD1_HUMAN (Peptidylprolyl isomerase domain and WD repeat-containing protein 1 OS=Homo sapiens GN=PPWD1 PE=1 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 4.858e-17
Identity = 45/85 (52.94%), Postives = 57/85 (67.06%), Query Frame = 1
Query:    1 GTGGESIYGSKFADE-NFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKP 252
            G GGESI+G +F DE +   +H  P  LSMANAG  TNGSQFF+    T WLD KH VFG+V +GM+VV+ I  V   + +T+KP
Sbjct:  551 GMGGESIWGGEFEDEFHSTLRHDRPYTLSMANAGSNTNGSQFFITVVPTPWLDNKHTVFGRVTKGMEVVQRISNV-KVNPKTDKP 634          
The following BLAST results are available for this feature:
BLAST of FC929426 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 199
Match NameE-valueIdentityDescription
CYP15_RHIOR6.779e-1956.98Peptidyl-prolyl cis-trans isomerase cyp15 OS=Rhizo... [more]
CYPE_DICDI1.156e-1853.49Peptidyl-prolyl cis-trans isomerase cypE OS=Dictyo... [more]
PPIL1_ASPNG1.510e-1858.23Peptidyl-prolyl cis-trans isomerase-like 1 OS=Aspe... [more]
PPIL1_MOUSE4.394e-1856.96Peptidyl-prolyl cis-trans isomerase-like 1 OS=Mus ... [more]
PPIL1_HUMAN4.394e-1856.96Peptidyl-prolyl cis-trans isomerase-like 1 OS=Homo... [more]
PPIL1_BOVIN4.394e-1856.96Peptidyl-prolyl cis-trans isomerase-like 1 OS=Bos ... [more]
PPIB_TREPA7.495e-1863.89Probable peptidyl-prolyl cis-trans isomerase OS=Tr... [more]
CYP9_CAEEL7.495e-1848.94Peptidyl-prolyl cis-trans isomerase 9 OS=Caenorhab... [more]
PPWD1_PONAB4.858e-1752.94Peptidylprolyl isomerase domain and WD repeat-cont... [more]
PPWD1_HUMAN4.858e-1752.94Peptidylprolyl isomerase domain and WD repeat-cont... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAH2CA03RM1 PhII-IIIV1 Citrus clementina cDNA clone KN0AAH2CA03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929426 ID=FC929426; Name=FC929426; organism=Citrus clementina; type=EST; length=550bp
GGAACCGGAGGCGAATCAATCTACGGCTCAAAATTCGCCGATGAGAACTT
CGTGAAGAAGCACACCGGCCCCGGAATCCTCTCCATGGCGAATGCCGGAC
CCGGAACCAACGGATCTCAGTTCTTCGTCTGTACGGCCAAGACCGAGTGG
CTCGATGGGAAGCACGTTGTGTTCGGTCAAGTCGTCGAAGGAATGGACGT
CGTCAAGGCCATCGAGAAAGTGGGGTCCAGCTCCGGAAGGACCAACAAGC
CCGTCGTGATCGCTGATTGCGGTCAATTGTCTTAGATTTGATCATGATAA
TGATCGCCATCATCACGAGCCGTCTGATCGCGATCGTGATGGTGATTATG
TTATCTATTATTATGTGGCCGTGTCTGTAGGACTTTTAATCTTTATCTAA
TTTTCCTGCTATGTTACTTGTTCGGGTTGGATCGGGTCTCCGGTGGTGGT
TCTTGATGAACTGTTTTTTATGTCTTTCTATGAGCTGCCTTTTTAAATAA
GATAGGGCTTGTCTTGTTATATTACATAAAAAAAAAAAAAAAAAAAAAAA
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