FC929433

Overview
NameFC929433
Unique NameFC929433
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length883
Libraries
Library NameType
PhII-IIIV1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig9269 contig Ccv1_Contig9269:11..893. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC929433 vs. ExPASy Swiss-Prot
Match: PPIE_MOUSE (Peptidyl-prolyl cis-trans isomerase E OS=Mus musculus GN=Ppie PE=2 SV=2)

HSP 1 Score: 207.223 bits (526), Expect = 9.948e-53
Identity = 100/175 (57.14%), Postives = 122/175 (69.71%), Query Frame = 3
Query:  330 PINQSKMPNPKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKPVVIADCG 854
            P  +    NP+V+ D+ +G +PAGRI M L +DV P TAENFR LCT EKG G       +KGSSFHR+IP FMCQ            +SIYG KF DENF+ KHTGPG+LSMAN+GP TNGSQFF+   KT+WLDGKHVVFG+V EG+DV++ IE  GS  G+  + V+IADCG
Sbjct:  131 PTAKKARSNPQVYMDIKIGNKPAGRIQMLLRSDVVPMTAENFRCLCTHEKGFG-------FKGSSFHRIIPQFMCQGGDFTNHNGTGGKSIYGKKFDDENFILKHTGPGLLSMANSGPNTNGSQFFLTCDKTDWLDGKHVVFGEVTEGLDVLRQIEAQGSKDGKPKQKVMIADCG 298          
BLAST of FC929433 vs. ExPASy Swiss-Prot
Match: PPID_GIBZE (Peptidyl-prolyl cis-trans isomerase D OS=Gibberella zeae GN=CPR6 PE=3 SV=1)

HSP 1 Score: 206.453 bits (524), Expect = 1.697e-52
Identity = 102/170 (60.00%), Postives = 123/170 (72.35%), Query Frame = 3
Query:  357 PKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSG-RTNKPVVIADCGSLS 863
            P+V+FD+++GG+  GRI MEL+AD+ P+TA+NFR+LCTGEKGIGKSGKPLHYKGS FHRVI  FM Q            ESIYG+KF DE F  KH  P +LSMANAGP TNGSQFF+ T  T  LDGKHVVFG+V+ G  VV+ IE + + SG R  K  +I DCG L+
Sbjct:   11 PRVYFDISIGGKSVGRITMELYADLVPKTADNFRSLCTGEKGIGKSGKPLHYKGSVFHRVIKQFMIQGGDFTAGDGTGGESIYGNKFDDEAFPIKHEKPFLLSMANAGPNTNGSQFFITTVPTPHLDGKHVVFGEVLNGKSVVRQIENLTTQSGDRPAKEALIVDCGELT 180          
BLAST of FC929433 vs. ExPASy Swiss-Prot
Match: PAL4B_HUMAN (Peptidylprolyl cis-trans isomerase A-like 4B OS=Homo sapiens GN=PPIAL4B PE=1 SV=1)

HSP 1 Score: 206.453 bits (524), Expect = 1.697e-52
Identity = 101/169 (59.76%), Postives = 121/169 (71.60%), Query Frame = 3
Query:  348 MPNPKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKPVVIADCG 854
            M N  VFFD+TV G+P GRI ++LFAD   +TAENFRAL TGEKG         YKGS FHR+IPGFMCQ            +SIYG KF DEN ++KHTG GILSMANAGP TNGSQFF+C AKTEWLDGKHV FG+V E +++V+A+E  G  + +T+K + IADCG
Sbjct:    1 MVNSVVFFDITVDGKPLGRISIKLFADKILKTAENFRALSTGEKGF-------RYKGSCFHRIIPGFMCQGGDFTRHNGTGDKSIYGEKFDDENLIRKHTGSGILSMANAGPNTNGSQFFICAAKTEWLDGKHVAFGKVKERVNIVEAMEHFGYRNSKTSKKITIADCG 162          
BLAST of FC929433 vs. ExPASy Swiss-Prot
Match: PPID_EMENI (Peptidyl-prolyl cis-trans isomerase D OS=Emericella nidulans GN=cpr6 PE=3 SV=1)

HSP 1 Score: 206.068 bits (523), Expect = 2.216e-52
Identity = 100/169 (59.17%), Postives = 118/169 (69.82%), Query Frame = 3
Query:  357 PKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKPVVIADCGSLS 863
            P+VFFD+ +G Q  GRI  ELF DV P+TAENFRALCTGEKG+GK GKPLH+KGS FHRVI  FM Q            ESIYG KF DENF  KH  P +LSMAN+GPGTNGSQFF+ T  T  LDGKHVVFG+V+ G  VV+ IE + + + +    V IA+CG L+
Sbjct:    7 PRVFFDIQIGQQQTGRIAFELFNDVVPKTAENFRALCTGEKGMGKQGKPLHFKGSIFHRVIKQFMIQGGDFTAFNGTGGESIYGEKFPDENFELKHDRPFLLSMANSGPGTNGSQFFITTVPTPHLDGKHVVFGEVINGKSVVRKIENMPTQADKPTTDVTIAECGELT 175          
BLAST of FC929433 vs. ExPASy Swiss-Prot
Match: PPIE_BOVIN (Peptidyl-prolyl cis-trans isomerase E OS=Bos taurus GN=PPIE PE=2 SV=1)

HSP 1 Score: 204.912 bits (520), Expect = 4.937e-52
Identity = 97/175 (55.43%), Postives = 122/175 (69.71%), Query Frame = 3
Query:  330 PINQSKMPNPKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKPVVIADCG 854
            P  +    NP+V+ D+ +G +PAGRI M L +DV P TAENFR LCT EKG G       +KGSSFHR+IP FMCQ            +SIYG KF DENF+ KHTGPG+LSMAN+GP TNGSQFF+   KT+WLDGKHVVFG++ +G+DV++ IE  GS  G+  + V+I+DCG
Sbjct:  131 PAVKKARSNPQVYMDIKIGNKPAGRIQMLLRSDVVPMTAENFRCLCTHEKGFG-------FKGSSFHRIIPQFMCQGGDFTNHNGTGGKSIYGKKFDDENFILKHTGPGLLSMANSGPNTNGSQFFLTCDKTDWLDGKHVVFGEITDGLDVLRQIEAQGSKDGKPKQKVIISDCG 298          
BLAST of FC929433 vs. ExPASy Swiss-Prot
Match: PPID_MOUSE (40 kDa peptidyl-prolyl cis-trans isomerase OS=Mus musculus GN=Ppid PE=1 SV=3)

HSP 1 Score: 204.912 bits (520), Expect = 4.937e-52
Identity = 101/174 (58.05%), Postives = 121/174 (69.54%), Query Frame = 3
Query:  342 SKMPNPKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKS-GKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKPVVIADCGSL 860
            S   NP+VFFD+ +GG+  GRIV+ELFAD+ P+TAENFRALCTGEKG G + GKPLH+KG  FHR+I  FM Q            ESIYG KF DENF  KH   G+LSMANAGP TNGSQFF+ T  T  LDGKHVVFGQV++G+ V + +E V  +  +  K  VIA+CG L
Sbjct:   11 SNSKNPRVFFDVDIGGERVGRIVLELFADIVPKTAENFRALCTGEKGTGSTTGKPLHFKGCPFHRIIKKFMIQGGDFSNQNGTGGESIYGEKFEDENFHYKHDREGLLSMANAGPNTNGSQFFITTVPTPHLDGKHVVFGQVIKGLGVARTLENVEVNGEKPAKLCVIAECGEL 184          
BLAST of FC929433 vs. ExPASy Swiss-Prot
Match: PPID_BOVIN (40 kDa peptidyl-prolyl cis-trans isomerase OS=Bos taurus GN=PPID PE=1 SV=6)

HSP 1 Score: 204.527 bits (519), Expect = 6.448e-52
Identity = 103/174 (59.20%), Postives = 120/174 (68.97%), Query Frame = 3
Query:  342 SKMPNPKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKS-GKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKPVVIADCGSL 860
            S   NP+VFFD+ +GG+  GRIV+ELFAD+ P+TAENFRALCTGEKGIG + GKPLH+KG  FHR+I  FM Q            ESIYG KF DENF  KH   G+LSMANAG  TNGSQFF+ T  T  LDGKHVVFGQV++GM V K +E V     +  K  VIA+CG L
Sbjct:   11 SNPSNPRVFFDVDIGGERVGRIVLELFADIVPKTAENFRALCTGEKGIGPTTGKPLHFKGCPFHRIIKKFMIQGGDFSNQNGTGGESIYGEKFEDENFHYKHDKEGLLSMANAGSNTNGSQFFITTVPTPHLDGKHVVFGQVIKGMGVAKILENVEVKGEKPAKLCVIAECGEL 184          
BLAST of FC929433 vs. ExPASy Swiss-Prot
Match: PPIE_SCHJA (Peptidyl-prolyl cis-trans isomerase E (Fragment) OS=Schistosoma japonicum PE=2 SV=1)

HSP 1 Score: 204.142 bits (518), Expect = 8.421e-52
Identity = 98/168 (58.33%), Postives = 118/168 (70.24%), Query Frame = 3
Query:  357 PKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKPVVIADCGSL 860
            P+VFFD+ +G    GRIVMEL +D+ PRTAENFRALCTG++G G       Y    FHRVIP FMCQ            +SIYG KF DENF  +H G G+LSMAN+GP TNGSQFF+CT K +WLDGKHVVFG+VV+G +VVK +E VGS SG+  +PV I+ CG L
Sbjct:   18 PRVFFDIRIGNADRGRIVMELRSDIVPRTAENFRALCTGDRGFG-------YHNCCFHRVIPQFMCQGGDFVKGDGTGGKSIYGRKFDDENFQLRHEGFGVLSMANSGPNTNGSQFFICTTKCDWLDGKHVVFGRVVDGQNVVKKMESVGSKSGKVKEPVTISRCGEL 178          
BLAST of FC929433 vs. ExPASy Swiss-Prot
Match: PPID_RAT (40 kDa peptidyl-prolyl cis-trans isomerase OS=Rattus norvegicus GN=Ppid PE=1 SV=3)

HSP 1 Score: 204.142 bits (518), Expect = 8.421e-52
Identity = 101/174 (58.05%), Postives = 121/174 (69.54%), Query Frame = 3
Query:  342 SKMPNPKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKS-GKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKPVVIADCGSL 860
            S   NP+VFFD+ +GG+  GRIV+ELFAD+ P+TAENFRALCTGEKG G + GKPLH+KG  FHR+I  FM Q            ESIYG KF DENF  KH   G+LSMANAGP TNGSQFF+ T  T  LDGKHVVFGQV++G+ V + +E V  +  +  K  VIA+CG L
Sbjct:   11 SNSKNPRVFFDVDIGGERVGRIVLELFADIVPKTAENFRALCTGEKGTGPTTGKPLHFKGCPFHRIIKKFMIQGGDFSNQNGTGGESIYGEKFEDENFHYKHDREGLLSMANAGPNTNGSQFFITTVPTPHLDGKHVVFGQVIKGLGVARMLENVEVNGEKPAKLCVIAECGEL 184          
BLAST of FC929433 vs. ExPASy Swiss-Prot
Match: CYPH_SCHPO (Peptidyl-prolyl cis-trans isomerase OS=Schizosaccharomyces pombe GN=ppi1 PE=2 SV=1)

HSP 1 Score: 201.83 bits (512), Expect = 4.179e-51
Identity = 100/165 (60.61%), Postives = 114/165 (69.09%), Query Frame = 3
Query:  366 FFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKPVVIADCGSL 860
            FFD+   GQP GRIV +LF DV P+TA NFRALCTGEKG G       Y GS+FHRVIP FM Q            +SIYG KF DENF  KH  PG+LSMANAGP TNGSQFF+ T  T WLDGKHVVFG+V EGMDVVK +E +GS+SG T   +VI  CG++
Sbjct:    5 FFDVIANGQPLGRIVFKLFDDVVPKTAANFRALCTGEKGYG-------YAGSTFHRVIPQFMLQGGDFTRGNGTGGKSIYGEKFPDENFALKHNKPGLLSMANAGPNTNGSQFFITTVVTPWLDGKHVVFGEVTEGMDVVKKVESLGSNSGATRARIVIDKCGTV 162          
The following BLAST results are available for this feature:
BLAST of FC929433 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 232
Match NameE-valueIdentityDescription
PPIE_MOUSE9.948e-5357.14Peptidyl-prolyl cis-trans isomerase E OS=Mus muscu... [more]
PPID_GIBZE1.697e-5260.00Peptidyl-prolyl cis-trans isomerase D OS=Gibberell... [more]
PAL4B_HUMAN1.697e-5259.76Peptidylprolyl cis-trans isomerase A-like 4B OS=Ho... [more]
PPID_EMENI2.216e-5259.17Peptidyl-prolyl cis-trans isomerase D OS=Emericell... [more]
PPIE_BOVIN4.937e-5255.43Peptidyl-prolyl cis-trans isomerase E OS=Bos tauru... [more]
PPID_MOUSE4.937e-5258.0540 kDa peptidyl-prolyl cis-trans isomerase OS=Mus ... [more]
PPID_BOVIN6.448e-5259.2040 kDa peptidyl-prolyl cis-trans isomerase OS=Bos ... [more]
PPIE_SCHJA8.421e-5258.33Peptidyl-prolyl cis-trans isomerase E (Fragment) O... [more]
PPID_RAT8.421e-5258.0540 kDa peptidyl-prolyl cis-trans isomerase OS=Ratt... [more]
CYPH_SCHPO4.179e-5160.61Peptidyl-prolyl cis-trans isomerase OS=Schizosacch... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAH2CA11RM1 PhII-IIIV1 Citrus clementina cDNA clone KN0AAH2CA11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929433 ID=FC929433; Name=FC929433; organism=Citrus clementina; type=EST; length=883bp
GGCACGAGGTTGCTGGCGACGGCAAGGAGAATGGCCTCATTAGCAACCAC
TTCAGAGTCCAGGCGGTACTGCTGGCCTAACATGTAATGCCCCACGTAGT
CTGCACATTTTTCGGGAACAGTCGCCCATCCTATAACGTTATTAGTTTCC
ACTCCGAGTCGCCAACTCAGGCAGGACAAGCCGGGCACATCGTTGTTCCG
GGAACCGGCTTTCGGTCGGAGAAGATGAATCTGATGGGGGATGTCCATGC
TAAATCCATGGGATGTTGCTGCCTCGTGCCGAATTCGGCACGAGGATCAG
AAGTCCGTGTTTAGTTTGTTTTTTTCTCTCCAATCAACCAATCAAAAATG
CCAAACCCCAAAGTGTTCTTCGACATGACCGTCGGCGGTCAGCCCGCCGG
CAGGATCGTGATGGAGCTCTTCGCCGATGTCACCCCCCGAACCGCCGAGA
ACTTCCGCGCCCTCTGCACCGGCGAGAAAGGCATCGGCAAGTCCGGCAAG
CCACTCCACTACAAGGGCTCGTCCTTCCACCGTGTGATCCCCGGATTCAT
GTGCCAGGGGGGAGACTTCACCGCCGGAAACGGAACCGGAGGCGAATCAA
TCTACGGCTCAAAATTCGCCGATGAGAACTTCGTGAAGAAGCACACCGGC
CCCGGAATCCTCTCCATGGCGAATGCCGGACCCGGAACCAACGGATCTCA
GTTCTTCGTCTGTACGGCCAAGACCGAGTGGCTCGATGGGAAGCACGTTG
TGTTCGGTCAAGTCGTCGAAGGAATGGACGTCGTCAAGGCCATCGAGAAA
GTGGGGTCCAGCTCCGGAAGGACAAACAAGCCCGTCGTGATCGCTGATTG
CGGGTCATTGTCTTAGATTTGATCATGATAATG
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