FC929471

Overview
NameFC929471
Unique NameFC929471
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length815
Libraries
Library NameType
PhII-IIIV1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15041 contig Ccv1_Contig15041:1..815. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC929471 vs. ExPASy Swiss-Prot
Match: CDC2B_ANTMA (Cell division control protein 2 homolog B (Fragment) OS=Antirrhinum majus GN=CDC2B PE=2 SV=1)

HSP 1 Score: 331.257 bits (848), Expect = 4.043e-90
Identity = 160/185 (86.49%), Postives = 171/185 (92.43%), Query Frame = 1
Query:  259 YGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVN 813
            YGVVYKAR+  TNE IALKKIRLEQEDEGVPSTAIREISLLKEM H NIV L+DVVH EK+LYLVFEYLDLDLKKHMDSCP+F+ D  ++K FL QILRG+AYCHSHRVLHRDLKPQNLLIDR +N +KLADFGLARAFGIPVRTFTHEVVTLWYRAPE+LLGSRHYSTPVDVWSVGCIFAEMVN
Sbjct:    2 YGVVYKARDIETNEDIALKKIRLEQEDEGVPSTAIREISLLKEMHHENIVNLKDVVHREKRLYLVFEYLDLDLKKHMDSCPEFSQDLHMVKMFLCQILRGVAYCHSHRVLHRDLKPQNLLIDRGSNTIKLADFGLARAFGIPVRTFTHEVVTLWYRAPEVLLGSRHYSTPVDVWSVGCIFAEMVN 186          
BLAST of FC929471 vs. ExPASy Swiss-Prot
Match: CDK5_DICDI (Cell division protein kinase 5 homolog OS=Dictyostelium discoideum GN=cdk5 PE=2 SV=2)

HSP 1 Score: 297.745 bits (761), Expect = 4.953e-80
Identity = 140/197 (71.07%), Postives = 171/197 (86.80%), Query Frame = 1
Query:  223 KYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVN 813
            KY K+EK+GEGTYG+VYKA+N  T E +ALK+IRL+ EDEGVP TAIREISLLKE++H NIVRL DV+H+E+KL LVFEYLD DLKK++D C    + P  IK+F+YQ+L+G+A+CH HRVLHRDLKPQNLLI+R+   LKLADFGLARAFGIPVRT++HEVVTLWYRAP++L+GSR YSTP+D+WS GCIFAEM +
Sbjct:    3 KYSKIEKLGEGTYGIVYKAKNRETGEIVALKRIRLDSEDEGVPCTAIREISLLKELKHPNIVRLHDVIHTERKLTLVFEYLDQDLKKYLDECGGEISKP-TIKSFMYQLLKGVAFCHDHRVLHRDLKPQNLLINRK-GELKLADFGLARAFGIPVRTYSHEVVTLWYRAPDVLMGSRKYSTPIDIWSAGCIFAEMAS 197          
BLAST of FC929471 vs. ExPASy Swiss-Prot
Match: CDK3_HUMAN (Cell division protein kinase 3 OS=Homo sapiens GN=CDK3 PE=1 SV=1)

HSP 1 Score: 292.352 bits (747), Expect = 2.081e-78
Identity = 141/195 (72.31%), Postives = 171/195 (87.69%), Query Frame = 1
Query:  226 YEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMV 810
            ++KVEKIGEGTYGVVYKA+N  T + +ALKKIRL+ E EGVPSTAIREISLLKE++H NIVRL DVVH+E+KLYLVFE+L  DLKK+MDS P       LIK++L+Q+L+G+++CHSHRV+HRDLKPQNLLI+    A+KLADFGLARAFG+P+RT+THEVVTLWYRAPEILLGS+ Y+T VD+WS+GCIFAEMV
Sbjct:    4 FQKVEKIGEGTYGVVYKAKNRETGQLVALKKIRLDLEMEGVPSTAIREISLLKELKHPNIVRLLDVVHNERKLYLVFEFLSQDLKKYMDSTPGSELPLHLIKSYLFQLLQGVSFCHSHRVIHRDLKPQNLLIN-ELGAIKLADFGLARAFGVPLRTYTHEVVTLWYRAPEILLGSKFYTTAVDIWSIGCIFAEMV 197          
BLAST of FC929471 vs. ExPASy Swiss-Prot
Match: CDK2_CARAU (Cell division protein kinase 2 OS=Carassius auratus GN=cdk2 PE=2 SV=1)

HSP 1 Score: 290.812 bits (743), Expect = 6.055e-78
Identity = 140/195 (71.79%), Postives = 169/195 (86.67%), Query Frame = 1
Query:  226 YEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMV 810
            ++KVEKIGEGTYGVVYKA+N VT ET+ALKKIRL+ E EGVPSTAIREISLLKE+ H NIV+L DV+H+E KLYLVFE+L  DLK+ MDS         L+K++L+Q+L+G+A+CHSHRVLHRDLKPQNLLI+ +   +KLADFGLARAFG+PVRT+THEVVTLWYRAPEILLG ++YST VD+WS+GCIFAEM+
Sbjct:    4 FQKVEKIGEGTYGVVYKAKNKVTGETVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLHDVIHTENKLYLVFEFLHQDLKRFMDSSTVTGISLPLVKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINAQ-GEIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMI 197          
BLAST of FC929471 vs. ExPASy Swiss-Prot
Match: CDK2_HUMAN (Cell division protein kinase 2 OS=Homo sapiens GN=CDK2 PE=1 SV=2)

HSP 1 Score: 289.656 bits (740), Expect = 1.349e-77
Identity = 142/195 (72.82%), Postives = 168/195 (86.15%), Query Frame = 1
Query:  226 YEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMV 810
            ++KVEKIGEGTYGVVYKARN +T E +ALKKIRL+ E EGVPSTAIREISLLKE+ H NIV+L DV+H+E KLYLVFE+L  DLKK MD+         LIK++L+Q+L+G+A+CHSHRVLHRDLKPQNLLI+    A+KLADFGLARAFG+PVRT+THEVVTLWYRAPEILLG ++YST VD+WS+GCIFAEMV
Sbjct:    4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTE-GAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV 197          
BLAST of FC929471 vs. ExPASy Swiss-Prot
Match: CDC2H_THEPA (Cell division control protein 2 homolog OS=Theileria parva GN=CRK2 PE=3 SV=1)

HSP 1 Score: 288.886 bits (738), Expect = 2.301e-77
Identity = 144/197 (73.10%), Postives = 168/197 (85.28%), Query Frame = 1
Query:  223 KYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVN 813
            +Y K+EKIGEGTYGVVYKA+N    E  ALKKIR+E+EDEG+PSTAIREISLLKE+ H NIV L+DV+HSEK L LVFEYLD DLKK +D+C D   +P   K+FLYQILRGI+YCH HR+LHRDLKPQNLLI+R    LKLADFGLARAF IPVR++THEVVTLWYRAP++L+GS+ YST VD+WSVGCIFAEM+N
Sbjct:    3 RYHKMEKIGEGTYGVVYKAQNN-HGEICALKKIRVEEEDEGIPSTAIREISLLKELHHPNIVWLRDVIHSEKCLTLVFEYLDQDLKKLLDAC-DGGLEPTTAKSFLYQILRGISYCHDHRILHRDLKPQNLLINRE-GVLKLADFGLARAFAIPVRSYTHEVVTLWYRAPDVLMGSKKYSTAVDIWSVGCIFAEMIN 196          
BLAST of FC929471 vs. ExPASy Swiss-Prot
Match: CDC2H_THEAN (Cell division control protein 2 homolog OS=Theileria annulata GN=CRK2 PE=2 SV=1)

HSP 1 Score: 288.886 bits (738), Expect = 2.301e-77
Identity = 144/197 (73.10%), Postives = 168/197 (85.28%), Query Frame = 1
Query:  223 KYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVN 813
            +Y K+EKIGEGTYGVVYKA+N    E  ALKKIR+E+EDEG+PSTAIREISLLKE+ H NIV L+DV+HSEK L LVFEYLD DLKK +D+C D   +P   K+FLYQILRGI+YCH HR+LHRDLKPQNLLI+R    LKLADFGLARAF IPVR++THEVVTLWYRAP++L+GS+ YST VD+WSVGCIFAEM+N
Sbjct:    3 RYHKMEKIGEGTYGVVYKAQNN-HGEICALKKIRVEEEDEGIPSTAIREISLLKELHHPNIVWLRDVIHSEKCLTLVFEYLDQDLKKLLDAC-DGGLEPTTAKSFLYQILRGISYCHDHRILHRDLKPQNLLINRE-GVLKLADFGLARAFAIPVRSYTHEVVTLWYRAPDVLMGSKKYSTAVDIWSVGCIFAEMIN 196          
BLAST of FC929471 vs. ExPASy Swiss-Prot
Match: CDK2_XENLA (Cell division protein kinase 2 OS=Xenopus laevis GN=cdk2 PE=1 SV=3)

HSP 1 Score: 288.115 bits (736), Expect = 3.925e-77
Identity = 141/195 (72.31%), Postives = 166/195 (85.13%), Query Frame = 1
Query:  226 YEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMV 810
            ++KVEKIGEGTYGVVYKARN  T E +ALKKIRL+ E EGVPSTAIREISLLKE+ H NIV+L DV+H+E KLYLVFE+L+ DLKK MD          L+K++L+Q+L+G+A+CHSHRVLHRDLKPQNLLI+    A+KLADFGLARAFG+PVRTFTHEVVTLWYRAPEILLG + YST VD+WS+GCIFAEM+
Sbjct:    4 FQKVEKIGEGTYGVVYKARNRETGEIVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLNQDLKKFMDGSNISGISLALVKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLIN-SDGAIKLADFGLARAFGVPVRTFTHEVVTLWYRAPEILLGCKFYSTAVDIWSLGCIFAEMI 197          
BLAST of FC929471 vs. ExPASy Swiss-Prot
Match: CDK2_CRIGR (Cell division protein kinase 2 OS=Cricetulus griseus GN=CDK2 PE=2 SV=1)

HSP 1 Score: 287.73 bits (735), Expect = 5.126e-77
Identity = 140/195 (71.79%), Postives = 168/195 (86.15%), Query Frame = 1
Query:  226 YEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMV 810
            ++KVEKIGEGTYGVVYKA+N +T E +ALKKIRL+ E EGVPSTAIREISLLKE+ H NIV+L DV+H+E KLYLVFE+L  DLKK MD+         LIK++L+Q+L+G+A+CHSHRVLHRDLKPQNLLI+    ++KLADFGLARAFG+PVRT+THEVVTLWYRAPEILLG ++YST VD+WS+GCIFAEMV
Sbjct:    4 FQKVEKIGEGTYGVVYKAKNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASAVTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINAE-GSIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV 197          
BLAST of FC929471 vs. ExPASy Swiss-Prot
Match: CDK2_RAT (Cell division protein kinase 2 OS=Rattus norvegicus GN=Cdk2 PE=2 SV=1)

HSP 1 Score: 287.345 bits (734), Expect = 6.695e-77
Identity = 140/195 (71.79%), Postives = 168/195 (86.15%), Query Frame = 1
Query:  226 YEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMV 810
            ++KVEKIGEGTYGVVYKA+N +T E +ALKKIRL+ E EGVPSTAIREISLLKE+ H NIV+L DV+H+E KLYLVFE+L  DLKK MD+         LIK++L+Q+L+G+A+CHSHRVLHRDLKPQNLLI+    ++KLADFGLARAFG+PVRT+THEVVTLWYRAPEILLG ++YST VD+WS+GCIFAEMV
Sbjct:    4 FQKVEKIGEGTYGVVYKAKNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGLPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINAE-GSIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV 197          
The following BLAST results are available for this feature:
BLAST of FC929471 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CDC2B_ANTMA4.043e-9086.49Cell division control protein 2 homolog B (Fragmen... [more]
CDK5_DICDI4.953e-8071.07Cell division protein kinase 5 homolog OS=Dictyost... [more]
CDK3_HUMAN2.081e-7872.31Cell division protein kinase 3 OS=Homo sapiens GN=... [more]
CDK2_CARAU6.055e-7871.79Cell division protein kinase 2 OS=Carassius auratu... [more]
CDK2_HUMAN1.349e-7772.82Cell division protein kinase 2 OS=Homo sapiens GN=... [more]
CDC2H_THEPA2.301e-7773.10Cell division control protein 2 homolog OS=Theiler... [more]
CDC2H_THEAN2.301e-7773.10Cell division control protein 2 homolog OS=Theiler... [more]
CDK2_XENLA3.925e-7772.31Cell division protein kinase 2 OS=Xenopus laevis G... [more]
CDK2_CRIGR5.126e-7771.79Cell division protein kinase 2 OS=Cricetulus grise... [more]
CDK2_RAT6.695e-7771.79Cell division protein kinase 2 OS=Rattus norvegicu... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAH2CE06RM1 PhII-IIIV1 Citrus clementina cDNA clone KN0AAH2CE06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929471 ID=FC929471; Name=FC929471; organism=Citrus clementina; type=EST; length=815bp
GGCACGAGGCTAAAACTCACTTCTTTCACCGCCGCCGCTGCCTCCAATCA
CCTCACTCTTACTCCGGCGATCTCCCCCGTCGGCTTGGATCGTCCTCGCG
TCTGTTACTGTATTATGCATTTGTATTTTTCTCTTTCGTAAGCGGTTAAT
TTTTTCTTCATAACACACTGCCGCCACCTACGCCGTCGATTCGTGCCGTT
CTTGTCGCCGTCCGTCGGTAGCAAGTATGAAAAGGTTGAGAAGATTGGTG
AAGGAACCTATGGAGTAGTTTACAAGGCCCGTAATTGTGTCACGAATGAG
ACAATAGCATTGAAGAAGATCCGCCTTGAGCAGGAAGATGAAGGTGTGCC
TAGCACCGCAATTAGAGAAATTTCCCTCTTGAAAGAAATGCAGCATGGGA
ACATTGTTAGGTTGCAAGATGTAGTGCATAGCGAGAAGAAACTTTATCTG
GTTTTCGAGTATTTGGACTTGGATTTGAAGAAGCACATGGATTCTTGCCC
AGATTTTGCTAATGATCCTCGTCTGATAAAAACATTCCTTTATCAAATTC
TACGTGGCATTGCCTACTGCCATTCTCACCGGGTTCTTCATCGAGATTTG
AAACCACAAAATTTGCTAATAGATCGTCGTACGAATGCACTAAAGCTTGC
AGATTTTGGACTGGCCAGGGCTTTTGGTATTCCTGTTAGGACATTTACAC
ATGAGGTGGTGACATTGTGGTACAGAGCACCTGAAATATTACTAGGATCT
CGCCATTACTCTACTCCAGTTGATGTGTGGTCGGTGGGATGTATATTTGC
TGAGATGGTGAACCA
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