FC929471

Overview
NameFC929471
Unique NameFC929471
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length815
Libraries
Library NameType
PhII-IIIV1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of FC929471 vs. ExPASy Swiss-Prot
Match: CDK10_MOUSE (Cell division protein kinase 10 OS=Mus musculus GN=Cdk10 PE=2 SV=1)

HSP 1 Score: 192.586 bits (488), Expect = 2.244e-48
Identity = 91/198 (45.96%), Postives = 147/198 (74.24%), Query Frame = 1 
Query:  223 KYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVV--HSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMV 810
            ++EK+ +IGEGTYG+VY+AR+  T+E +ALKK+R+++E +G+P +++REI+LL  ++H NIV L++VV  +  + ++LV  Y + DL   +++ P   ++ + +K  + Q+LRG+ Y H + ++HRDLK  NLL+  +   +K ADFGLARA+G+PV+  T +VVTLWYRAPE+LLG+   +T +D+W+VGCI AE++
Sbjct:   38 EFEKLNRIGEGTYGIVYRARDTQTDEIVALKKVRMDKEKDGIPISSLREITLLLRLRHPNIVELKEVVVGNHLESIFLVMGYCEQDLASLLENMPTPFSEAQ-VKCIMLQVLRGLQYLHRNFIIHRDLKVSNLLMTDK-GCVKTADFGLARAYGVPVKPMTPKVVTLWYRAPELLLGTTTQTTSIDMWAVGCILAELL 233
[Close]
BLAST of FC929471 vs. ExPASy Swiss-Prot
Match: CDK10_BOVIN (Cell division protein kinase 10 OS=Bos taurus GN=CDK10 PE=2 SV=1)

HSP 1 Score: 192.586 bits (488), Expect = 2.244e-48
Identity = 93/198 (46.97%), Postives = 147/198 (74.24%), Query Frame = 1 
Query:  223 KYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVV--HSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMV 810
            ++EK+ +IGEGTYG+VY+AR+  T+E +ALKK+R+++E +GVP +++REI+LL  ++H NIV L++VV  +  + ++LV  Y + DL   +++ P   ++ + +K  + Q+LRG+ Y H + ++HRDLK  NLL+  +   +K ADFGLARA+GIPV+  T +VVTLWYRAPE+LLG+   +T +D+W+VGCI AE++
Sbjct:   36 EFEKLNRIGEGTYGIVYRARDTHTDEIVALKKVRMDKEKDGVPISSLREITLLLRLRHPNIVELKEVVVGNHLESIFLVMGYCEQDLASLLENMPTPFSEAQ-VKCIVLQVLRGLQYLHRNFIIHRDLKVSNLLMTDK-GCVKTADFGLARAYGIPVKPMTPKVVTLWYRAPELLLGTTTQTTSIDMWAVGCILAELL 231
[Close]
BLAST of FC929471 vs. ExPASy Swiss-Prot
Match: CDK10_HUMAN (Cell division protein kinase 10 OS=Homo sapiens GN=CDK10 PE=1 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 2.931e-48
Identity = 91/198 (45.96%), Postives = 147/198 (74.24%), Query Frame = 1 
Query:  223 KYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVV--HSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMV 810
            ++EK+ +IGEGTYG+VY+AR+  T+E +ALKK+R+++E +G+P +++REI+LL  ++H NIV L++VV  +  + ++LV  Y + DL   +++ P   ++ + +K  + Q+LRG+ Y H + ++HRDLK  NLL+  +   +K ADFGLARA+G+PV+  T +VVTLWYRAPE+LLG+   +T +D+W+VGCI AE++
Sbjct:   38 EFEKLNRIGEGTYGIVYRARDTQTDEIVALKKVRMDKEKDGIPISSLREITLLLRLRHPNIVELKEVVVGNHLESIFLVMGYCEQDLASLLENMPTPFSEAQ-VKCIVLQVLRGLQYLHRNFIIHRDLKVSNLLMTDK-GCVKTADFGLARAYGVPVKPMTPKVVTLWYRAPELLLGTTTQTTSIDMWAVGCILAELL 233
[Close]
BLAST of FC929471 vs. ExPASy Swiss-Prot
Match: CDKG2_ORYSJ (Cyclin-dependent kinase G-2 OS=Oryza sativa subsp. japonica GN=CDKG-2 PE=2 SV=2)

HSP 1 Score: 191.43 bits (485), Expect = 5.000e-48
Identity = 94/198 (47.47%), Postives = 141/198 (71.21%), Query Frame = 1 
Query:  223 KYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVV--HSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMV 810
            ++E++ KI EGTYGVVY+AR+  T E +ALKK+++E+E EG P T++REI++L    H +IV +++VV   S   +++V EY++ DLK  M++     +    +K  + Q+L G+ Y H + VLHRDLK  NLL++ R   LK+ DFGL+R +G P++ +T  VVTLWYRAPE+LLG++ YST +D+WSVGCI AE++
Sbjct:  364 EFERLNKINEGTYGVVYRARDKKTGEIVALKKVKMEKEREGFPLTSLREINILLSFHHPSIVDVKEVVVGSSLDSIFMVMEYMEHDLKGVMEAMKQPYSQSE-VKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNR-GELKICDFGLSRQYGSPLKPYTQLVVTLWYRAPELLLGTKEYSTAIDMWSVGCIMAELL 559
[Close]
BLAST of FC929471 vs. ExPASy Swiss-Prot
Match: CDKG2_ORYSI (Cyclin-dependent kinase G-2 OS=Oryza sativa subsp. indica GN=CDKG-2 PE=2 SV=1)

HSP 1 Score: 191.43 bits (485), Expect = 5.000e-48
Identity = 94/198 (47.47%), Postives = 141/198 (71.21%), Query Frame = 1 
Query:  223 KYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVV--HSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMV 810
            ++E++ KI EGTYGVVY+AR+  T E +ALKK+++E+E EG P T++REI++L    H +IV +++VV   S   +++V EY++ DLK  M++     +    +K  + Q+L G+ Y H + VLHRDLK  NLL++ R   LK+ DFGL+R +G P++ +T  VVTLWYRAPE+LLG++ YST +D+WSVGCI AE++
Sbjct:  364 EFERLNKINEGTYGVVYRARDKKTGEIVALKKVKMEKEREGFPLTSLREINILLSFHHPSIVDVKEVVVGSSLDSIFMVMEYMEHDLKGVMEAMKQPYSQSE-VKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNR-GELKICDFGLSRQYGSPLKPYTQLVVTLWYRAPELLLGTKEYSTAIDMWSVGCIMAELL 559
[Close]
BLAST of FC929471 vs. ExPASy Swiss-Prot
Match: CDKC1_ARATH (Cyclin-dependent kinase C-1 OS=Arabidopsis thaliana GN=CDKC-1 PE=1 SV=1)

HSP 1 Score: 191.045 bits (484), Expect = 6.530e-48
Identity = 101/213 (47.42%), Postives = 139/213 (65.26%), Query Frame = 1 
Query:  226 YEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKK----------------LYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIP-VRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVN 813
            +EK+E+IGEGTYG VY A+   T E +ALKKIR++ E EG P TAIREI +LK++ H N+++L+++V S  +                +Y+VFEY+D DL    D  P        IK ++ Q+L G+ YCH ++VLHRD+K  NLLID   N LKLADFGLAR++        T+ V+TLWYR PE+LLG+  Y   +D+WSVGCIFAE+++
Sbjct:   26 FEKLEQIGEGTYGQVYMAKEIKTGEIVALKKIRMDNEREGFPITAIREIKILKKLHHENVIQLKEIVTSPGRDRDDQGKPDNNKYKGGIYMVFEYMDHDLTGLADR-PGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGN-LKLADFGLARSYSHDHTGNLTNRVITLWYRPPELLLGATKYGPAIDMWSVGCIFAELLH 236
[Close]
BLAST of FC929471 vs. ExPASy Swiss-Prot
Match: CDK7_MOUSE (Cell division protein kinase 7 OS=Mus musculus GN=Cdk7 PE=1 SV=2)

HSP 1 Score: 189.504 bits (480), Expect = 1.900e-47
Identity = 95/203 (46.80%), Postives = 134/203 (66.01%), Query Frame = 1 
Query:  211 SVGSKYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDE---GVPSTAIREISLLKEMQHGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMV 810
            S   +YEK++ +GEG +  VYKAR+  TN+ +A+KKI+L    E   G+  TA+REI LL+E+ H NI+ L D    +  + LVF++++ DL+  +         P  IK ++   L+G+ Y H H +LHRDLKP NLL+D     LKLADFGLA++FG P R +TH+VVT WYRAPE+L G+R Y   VD+W+VGCI AE++
Sbjct:    7 SRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNISLVFDFMETDLEVIIKD-NSLVLTPSHIKAYMLMTLQGLEYLHQHWILHRDLKPNNLLLDEN-GVLKLADFGLAKSFGSPNRAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELL 207
[Close]
BLAST of FC929471 vs. ExPASy Swiss-Prot
Match: CDK7_HUMAN (Cell division protein kinase 7 OS=Homo sapiens GN=CDK7 PE=1 SV=1)

HSP 1 Score: 189.504 bits (480), Expect = 1.900e-47
Identity = 95/203 (46.80%), Postives = 134/203 (66.01%), Query Frame = 1 
Query:  211 SVGSKYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDE---GVPSTAIREISLLKEMQHGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMV 810
            S   +YEK++ +GEG +  VYKAR+  TN+ +A+KKI+L    E   G+  TA+REI LL+E+ H NI+ L D    +  + LVF++++ DL+  +         P  IK ++   L+G+ Y H H +LHRDLKP NLL+D     LKLADFGLA++FG P R +TH+VVT WYRAPE+L G+R Y   VD+W+VGCI AE++
Sbjct:    7 SRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNISLVFDFMETDLEVIIKD-NSLVLTPSHIKAYMLMTLQGLEYLHQHWILHRDLKPNNLLLDEN-GVLKLADFGLAKSFGSPNRAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELL 207
[Close]
BLAST of FC929471 vs. ExPASy Swiss-Prot
Match: CD11B_HUMAN (Cell division protein kinase 11B OS=Homo sapiens GN=CDK11B PE=1 SV=3)

HSP 1 Score: 189.119 bits (479), Expect = 2.481e-47
Identity = 92/198 (46.46%), Postives = 141/198 (71.21%), Query Frame = 1 
Query:  223 KYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEK--KLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMV 810
            +++ + +I EGTYGVVY+A++  T+E +ALK++++E+E EG P T++REI+ + + QH NIV ++++V      K+Y+V  Y++ DLK  M++       P  +KT + Q+LRG+ + H + +LHRDLK  NLL+      LK+ DFGLAR +G P++ +T  VVTLWYRAPE+LLG++ YST VD+WSVGCIF E++
Sbjct:  437 EFQCLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINTILKAQHPNIVTVREIVVGSNMDKIYIVMNYVEHDLKSLMETMKQ-PFLPGEVKTLMIQLLRGVKHLHDNWILHRDLKTSNLLLSH-AGILKVGDFGLAREYGSPLKAYTPVVVTLWYRAPELLLGAKEYSTAVDMWSVGCIFGELL 632
[Close]
BLAST of FC929471 vs. ExPASy Swiss-Prot
Match: KP58_DROME (Serine/threonine-protein kinase PITSLRE OS=Drosophila melanogaster GN=Pitslre PE=1 SV=1)

HSP 1 Score: 188.348 bits (477), Expect = 4.232e-47
Identity = 94/200 (47.00%), Postives = 141/200 (70.50%), Query Frame = 1 
Query:  223 KYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEK--KLYLVFEYLDLDLKKHMDSCPDFAND--PRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMV 810
            +++ + +I EGTYGVVY+A++  TNE +ALK++++E+E EG P T++REI+ L + QH NIV ++++V      K+++V +Y++ DLK  M++  +      P  +K    Q+LR +A+ H + +LHRDLK  NLL+  +   LK+ DFGLAR +G P++ +T  VVTLWYRAPE+LL S  YSTP+DVWSVGCIFAE +
Sbjct:  557 EFQCLNRIEEGTYGVVYRAKDKRTNEIVALKRLKMEKEKEGFPITSLREINTLLKGQHPNIVTVREIVVGSNMDKIFIVMDYVEHDLKSLMETMKNRKQSFFPGEVKCLTQQLLRAVAHLHDNWILHRDLKTSNLLLSHK-GILKVGDFGLAREYGSPIKKYTSLVVTLWYRAPELLLCSPVYSTPIDVWSVGCIFAEFL 755
The following BLAST results are available for this feature:
BLAST of FC929471 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CDK10_MOUSE2.244e-4845.96Cell division protein kinase 10 OS=Mus musculus GN... [more]
CDK10_BOVIN2.244e-4846.97Cell division protein kinase 10 OS=Bos taurus GN=C... [more]
CDK10_HUMAN2.931e-4845.96Cell division protein kinase 10 OS=Homo sapiens GN... [more]
CDKG2_ORYSJ5.000e-4847.47Cyclin-dependent kinase G-2 OS=Oryza sativa subsp.... [more]
CDKG2_ORYSI5.000e-4847.47Cyclin-dependent kinase G-2 OS=Oryza sativa subsp.... [more]
CDKC1_ARATH6.530e-4847.42Cyclin-dependent kinase C-1 OS=Arabidopsis thalian... [more]
CDK7_MOUSE1.900e-4746.80Cell division protein kinase 7 OS=Mus musculus GN=... [more]
CDK7_HUMAN1.900e-4746.80Cell division protein kinase 7 OS=Homo sapiens GN=... [more]
CD11B_HUMAN2.481e-4746.46Cell division protein kinase 11B OS=Homo sapiens G... [more]
KP58_DROME4.232e-4747.00Serine/threonine-protein kinase PITSLRE OS=Drosoph... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAH2CE06RM1 PhII-IIIV1 Citrus clementina cDNA clone KN0AAH2CE06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929471 ID=FC929471; Name=FC929471; organism=Citrus clementina; type=EST; length=815bp
GGCACGAGGCTAAAACTCACTTCTTTCACCGCCGCCGCTGCCTCCAATCA
CCTCACTCTTACTCCGGCGATCTCCCCCGTCGGCTTGGATCGTCCTCGCG
TCTGTTACTGTATTATGCATTTGTATTTTTCTCTTTCGTAAGCGGTTAAT
TTTTTCTTCATAACACACTGCCGCCACCTACGCCGTCGATTCGTGCCGTT
CTTGTCGCCGTCCGTCGGTAGCAAGTATGAAAAGGTTGAGAAGATTGGTG
AAGGAACCTATGGAGTAGTTTACAAGGCCCGTAATTGTGTCACGAATGAG
ACAATAGCATTGAAGAAGATCCGCCTTGAGCAGGAAGATGAAGGTGTGCC
TAGCACCGCAATTAGAGAAATTTCCCTCTTGAAAGAAATGCAGCATGGGA
ACATTGTTAGGTTGCAAGATGTAGTGCATAGCGAGAAGAAACTTTATCTG
GTTTTCGAGTATTTGGACTTGGATTTGAAGAAGCACATGGATTCTTGCCC
AGATTTTGCTAATGATCCTCGTCTGATAAAAACATTCCTTTATCAAATTC
TACGTGGCATTGCCTACTGCCATTCTCACCGGGTTCTTCATCGAGATTTG
AAACCACAAAATTTGCTAATAGATCGTCGTACGAATGCACTAAAGCTTGC
AGATTTTGGACTGGCCAGGGCTTTTGGTATTCCTGTTAGGACATTTACAC
ATGAGGTGGTGACATTGTGGTACAGAGCACCTGAAATATTACTAGGATCT
CGCCATTACTCTACTCCAGTTGATGTGTGGTCGGTGGGATGTATATTTGC
TGAGATGGTGAACCA
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