FC929471

Overview
NameFC929471
Unique NameFC929471
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length815
Libraries
Library NameType
PhII-IIIV1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC929471 vs. ExPASy Swiss-Prot
Match: CDKC3_ORYSJ (Cyclin-dependent kinase C-3 OS=Oryza sativa subsp. japonica GN=CDKC-1 PE=2 SV=2)

HSP 1 Score: 188.348 bits (477), Expect = 4.232e-47
Identity = 98/210 (46.67%), Postives = 136/210 (64.76%), Query Frame = 1
Query:  226 YEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHS---------------EKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMV 810
            + ++ KIGEGTYG V++A + +T E  ALKKI+L+   EG P   +REI LLK++ H NI+RL+++V S                  +Y+VFEY+D DLKK +       + P  +K ++ Q+L+G+ YCH + VLHRD+K  NLLI      LKLADFGLAR F     +FT+ V+TLWYR PE+LLG+ +Y+  VD+WSVGCIFAE +
Sbjct:   27 FRRIRKIGEGTYGEVFEAMDIITGERAALKKIKLDDGKEGFPRQILREIKLLKKLDHENIIRLKEIVVSPGTAHGAGGSDDYMYRGDIYMVFEYMDHDLKKVLHH-----STPSQVKYYMEQLLKGLHYCHVNNVLHRDIKGANLLISGGGKLLKLADFGLARPF-TRDGSFTNHVITLWYRPPELLLGATNYAEAVDIWSVGCIFAEFL 230          
BLAST of FC929471 vs. ExPASy Swiss-Prot
Match: CDK6_MOUSE (Cell division protein kinase 6 OS=Mus musculus GN=Cdk6 PE=2 SV=2)

HSP 1 Score: 187.578 bits (475), Expect = 7.219e-47
Identity = 101/204 (49.51%), Postives = 140/204 (68.63%), Query Frame = 1
Query:  223 KYEKVEKIGEGTYGVVYKARNCVTN-ETIALKKIRLEQEDEGVPSTAIREISLLKEMQ---HGNIVRLQDV-----VHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEM 807
            +YE V +IGEG YG V+KAR+       +ALK++R++  +EG+P + IRE+++L+ ++   H N+VRL DV        E KL LVFE++D DL  ++D  P+       IK  ++Q+LRG+ + HSHRV+HRDLKPQN+L+   +  +KLADFGLAR +   +   T  VVTLWYRAPE+LL S  Y+TPVD+WSVGCIFAEM
Sbjct:   12 QYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTSEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILV-TSSGQIKLADFGLARIYSFQM-ALTSVVVTLWYRAPEVLLQS-SYATPVDLWSVGCIFAEM 212          
BLAST of FC929471 vs. ExPASy Swiss-Prot
Match: CDK6_HUMAN (Cell division protein kinase 6 OS=Homo sapiens GN=CDK6 PE=1 SV=1)

HSP 1 Score: 186.808 bits (473), Expect = 1.231e-46
Identity = 101/204 (49.51%), Postives = 140/204 (68.63%), Query Frame = 1
Query:  223 KYEKVEKIGEGTYGVVYKARNCVTN-ETIALKKIRLEQEDEGVPSTAIREISLLKEMQ---HGNIVRLQDV-----VHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEM 807
            +YE V +IGEG YG V+KAR+       +ALK++R++  +EG+P + IRE+++L+ ++   H N+VRL DV        E KL LVFE++D DL  ++D  P+       IK  ++Q+LRG+ + HSHRV+HRDLKPQN+L+   +  +KLADFGLAR +   +   T  VVTLWYRAPE+LL S  Y+TPVD+WSVGCIFAEM
Sbjct:   12 QYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILV-TSSGQIKLADFGLARIYSFQM-ALTSVVVTLWYRAPEVLLQS-SYATPVDLWSVGCIFAEM 212          
BLAST of FC929471 vs. ExPASy Swiss-Prot
Match: CDK11_MOUSE (Cell division protein kinase 11 OS=Mus musculus GN=Cdk11 PE=1 SV=2)

HSP 1 Score: 186.808 bits (473), Expect = 1.231e-46
Identity = 91/198 (45.96%), Postives = 140/198 (70.71%), Query Frame = 1
Query:  223 KYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEK--KLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMV 810
            +++ + +I EGTYGVVY+A++  T+E +ALK++++E+E EG P T++REI+ + + QH NIV ++++V      K+Y+V  Y++ DLK  M++       P  +KT + Q+L G+ + H + +LHRDLK  NLL+      LK+ DFGLAR +G P++ +T  VVTLWYRAPE+LLG++ YST VD+WSVGCIF E++
Sbjct:  426 EFQCLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINTILKAQHPNIVTVREIVVGSNMDKIYIVMNYVEHDLKSLMETMKQ-PFLPGEVKTLMIQLLSGVKHLHDNWILHRDLKTSNLLLSH-AGILKVGDFGLAREYGSPLKAYTPVVVTLWYRAPELLLGAKEYSTAVDMWSVGCIFGELL 621          
BLAST of FC929471 vs. ExPASy Swiss-Prot
Match: CD11A_HUMAN (Cell division protein kinase 11A OS=Homo sapiens GN=CDK11A PE=1 SV=3)

HSP 1 Score: 186.808 bits (473), Expect = 1.231e-46
Identity = 91/198 (45.96%), Postives = 140/198 (70.71%), Query Frame = 1
Query:  223 KYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEK--KLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMV 810
            +++ + +I EGTYGVVY+A++  T+E +ALK++++E+E EG P T++REI+ + + QH NIV ++++V      K+Y+V  Y++ DLK  M++       P  +KT + Q+LRG+ + H + +LHRDLK  NLL+      LK+ DFGLAR +G P++ +T  VVT WYRAPE+LLG++ YST VD+WSVGCIF E++
Sbjct:  422 EFQCLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINTILKAQHPNIVTVREIVVGSNMDKIYIVMNYVEHDLKSLMETMKQ-PFLPGEVKTLMIQLLRGVKHLHDNWILHRDLKTSNLLLSH-AGILKVGDFGLAREYGSPLKAYTPVVVTQWYRAPELLLGAKEYSTAVDMWSVGCIFGELL 617          
BLAST of FC929471 vs. ExPASy Swiss-Prot
Match: CDK11_RAT (Cell division protein kinase 11 OS=Rattus norvegicus GN=Cdk11 PE=2 SV=1)

HSP 1 Score: 185.267 bits (469), Expect = 3.583e-46
Identity = 91/198 (45.96%), Postives = 139/198 (70.20%), Query Frame = 1
Query:  223 KYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEK--KLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMV 810
            +++ + +I EGTYGVVY+A++  T+E +ALK++++E+E EG P T+IREI+ + + QH NIV ++++V      K+Y+V  Y++ DLK  M++       P  +KT + Q+L G+ + H + +LHRDLK  NLL+      LK+ DFGLAR +G P++ +T  VVTLWYRAPE+LLG++ YST  D+WSVGCIF E++
Sbjct:   78 EFQCLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPLTSIREINTILKAQHPNIVTVREIVVGSNMDKIYIVMNYVEHDLKSLMETMKQ-PFLPGEVKTLMIQLLSGVKHLHDNWILHRDLKTSNLLLTH-AGILKVGDFGLAREYGSPLKAYTPVVVTLWYRAPELLLGAKEYSTACDMWSVGCIFGELL 273          
BLAST of FC929471 vs. ExPASy Swiss-Prot
Match: CDKL1_DANRE (Cyclin-dependent kinase-like 1 OS=Danio rerio GN=cdkl1 PE=2 SV=1)

HSP 1 Score: 184.111 bits (466), Expect = 7.982e-46
Identity = 86/197 (43.65%), Postives = 130/197 (65.99%), Query Frame = 1
Query:  223 KYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVN 813
            KYEK+ KIGEG+YGVV+K RN  T + +A+KK    ++D  +   A+REI +LK+++H N+V L +V   ++KL+LVFEY D  +   +D  P    +  ++K+ ++Q L+ + +CH    +HRD+KP+N+LI +    +KL DFG AR    P   +T  V T WYRAPE+L+G   Y  PVDVW+VGC+FAE+++
Sbjct:    3 KYEKISKIGEGSYGVVFKCRNKDTGQIVAIKKFVESEDDPIIKKIALREIRMLKQLKHPNLVNLMEVFRRKRKLHLVFEYCDHTVLNELDRYPRGVPE-HMVKSIIWQTLQAVNFCHKQNCIHRDVKPENILITKH-QVIKLCDFGFARILTGPCDYYTDCVATRWYRAPELLVGDTQYGPPVDVWAVGCVFAELLS 197          
BLAST of FC929471 vs. ExPASy Swiss-Prot
Match: CDKG1_ORYSJ (Cyclin-dependent kinase G-1 OS=Oryza sativa subsp. japonica GN=CDKG-1 PE=2 SV=1)

HSP 1 Score: 184.111 bits (466), Expect = 7.982e-46
Identity = 87/199 (43.72%), Postives = 141/199 (70.85%), Query Frame = 1
Query:  223 KYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVV--HSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVN 813
            ++E++  I EGTYGVV++ R+  T E +ALKK+++E+E EG P T++RE+++L    H +IV +++VV   +++ +++V EY++ DLK  M++     +    +K  + Q+L G+ Y H + VLHRDLK  NLL++ R   LK+ DFGL+R +G P++ +T  VVTLWYRAPE+LLG++ YST +D+WS+GCI  E+++
Sbjct:  348 EFERLNTINEGTYGVVFRVRDKRTGEIVALKKVKMEKEREGFPLTSLREMNILLSFHHPSIVEVKEVVVGSNDRDIFMVMEYMEHDLKGVMETMKQPYSQSE-VKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNR-GELKICDFGLSRQYGSPLKPYTQLVVTLWYRAPELLLGAKDYSTAIDMWSLGCIMGELLS 544          
BLAST of FC929471 vs. ExPASy Swiss-Prot
Match: CDKG1_ORYSI (Cyclin-dependent kinase G-1 OS=Oryza sativa subsp. indica GN=CDKG-1 PE=2 SV=1)

HSP 1 Score: 184.111 bits (466), Expect = 7.982e-46
Identity = 87/199 (43.72%), Postives = 141/199 (70.85%), Query Frame = 1
Query:  223 KYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVV--HSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVN 813
            ++E++  I EGTYGVV++ R+  T E +ALKK+++E+E EG P T++RE+++L    H +IV +++VV   +++ +++V EY++ DLK  M++     +    +K  + Q+L G+ Y H + VLHRDLK  NLL++ R   LK+ DFGL+R +G P++ +T  VVTLWYRAPE+LLG++ YST +D+WS+GCI  E+++
Sbjct:  348 EFERLNTINEGTYGVVFRVRDKRTGEIVALKKVKMEKEREGFPLTSLREMNILLSFHHPSIVEVKEVVVGSNDRDIFMVMEYMEHDLKGVMETMKQPYSQSE-VKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNR-GELKICDFGLSRQYGSPLKPYTQLVVTLWYRAPELLLGAKDYSTAIDMWSLGCIMGELLS 544          
BLAST of FC929471 vs. ExPASy Swiss-Prot
Match: PPK23_SCHPO (Serine/threonine-protein kinase ppk23 OS=Schizosaccharomyces pombe GN=ppk23 PE=2 SV=1)

HSP 1 Score: 183.726 bits (465), Expect = 1.042e-45
Identity = 97/198 (48.99%), Postives = 131/198 (66.16%), Query Frame = 1
Query:  226 YEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSE--KKLYLVFEYLDLDLKKHMDSCP-DFANDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMV 810
            YE +EKI EG+YG+VY+  +  TN  +ALKKI+ +    G P T++REI  L  ++H NIV L+ VV  +  K +YLV E+++ DLK  +D+ P DF      +KT + Q+L   A+ H H  LHRDLKP NLL++  T  +KLADFGLAR    P  + T  VVTLWYRAPE+LLG+  Y   +D+WS+GCIFAEM+
Sbjct:   74 YEILEKIEEGSYGIVYRGLDKSTNTLVALKKIKFDPNGIGFPITSLREIESLSSIRHDNIVELEKVVVGKDLKDVYLVMEFMEHDLKTLLDNMPEDFLQSE--VKTLMLQLLAATAFMHHHWYLHRDLKPSNLLMNN-TGEIKLADFGLARPVSEPKSSLTRLVVTLWYRAPELLLGAPSYGKEIDMWSIGCIFAEMI 268          
The following BLAST results are available for this feature:
BLAST of FC929471 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CDKC3_ORYSJ4.232e-4746.67Cyclin-dependent kinase C-3 OS=Oryza sativa subsp.... [more]
CDK6_MOUSE7.219e-4749.51Cell division protein kinase 6 OS=Mus musculus GN=... [more]
CDK6_HUMAN1.231e-4649.51Cell division protein kinase 6 OS=Homo sapiens GN=... [more]
CDK11_MOUSE1.231e-4645.96Cell division protein kinase 11 OS=Mus musculus GN... [more]
CD11A_HUMAN1.231e-4645.96Cell division protein kinase 11A OS=Homo sapiens G... [more]
CDK11_RAT3.583e-4645.96Cell division protein kinase 11 OS=Rattus norvegic... [more]
CDKL1_DANRE7.982e-4643.65Cyclin-dependent kinase-like 1 OS=Danio rerio GN=c... [more]
CDKG1_ORYSJ7.982e-4643.72Cyclin-dependent kinase G-1 OS=Oryza sativa subsp.... [more]
CDKG1_ORYSI7.982e-4643.72Cyclin-dependent kinase G-1 OS=Oryza sativa subsp.... [more]
PPK23_SCHPO1.042e-4548.99Serine/threonine-protein kinase ppk23 OS=Schizosac... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAH2CE06RM1 PhII-IIIV1 Citrus clementina cDNA clone KN0AAH2CE06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929471 ID=FC929471; Name=FC929471; organism=Citrus clementina; type=EST; length=815bp
GGCACGAGGCTAAAACTCACTTCTTTCACCGCCGCCGCTGCCTCCAATCA
CCTCACTCTTACTCCGGCGATCTCCCCCGTCGGCTTGGATCGTCCTCGCG
TCTGTTACTGTATTATGCATTTGTATTTTTCTCTTTCGTAAGCGGTTAAT
TTTTTCTTCATAACACACTGCCGCCACCTACGCCGTCGATTCGTGCCGTT
CTTGTCGCCGTCCGTCGGTAGCAAGTATGAAAAGGTTGAGAAGATTGGTG
AAGGAACCTATGGAGTAGTTTACAAGGCCCGTAATTGTGTCACGAATGAG
ACAATAGCATTGAAGAAGATCCGCCTTGAGCAGGAAGATGAAGGTGTGCC
TAGCACCGCAATTAGAGAAATTTCCCTCTTGAAAGAAATGCAGCATGGGA
ACATTGTTAGGTTGCAAGATGTAGTGCATAGCGAGAAGAAACTTTATCTG
GTTTTCGAGTATTTGGACTTGGATTTGAAGAAGCACATGGATTCTTGCCC
AGATTTTGCTAATGATCCTCGTCTGATAAAAACATTCCTTTATCAAATTC
TACGTGGCATTGCCTACTGCCATTCTCACCGGGTTCTTCATCGAGATTTG
AAACCACAAAATTTGCTAATAGATCGTCGTACGAATGCACTAAAGCTTGC
AGATTTTGGACTGGCCAGGGCTTTTGGTATTCCTGTTAGGACATTTACAC
ATGAGGTGGTGACATTGTGGTACAGAGCACCTGAAATATTACTAGGATCT
CGCCATTACTCTACTCCAGTTGATGTGTGGTCGGTGGGATGTATATTTGC
TGAGATGGTGAACCA
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