FC929471

Overview
NameFC929471
Unique NameFC929471
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length815
Libraries
Library NameType
PhII-IIIV1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC929471 vs. ExPASy Swiss-Prot
Match: CDKL1_MOUSE (Cyclin-dependent kinase-like 1 OS=Mus musculus GN=Cdkl1 PE=2 SV=1)

HSP 1 Score: 182.956 bits (463), Expect = 1.778e-45
Identity = 85/197 (43.15%), Postives = 132/197 (67.01%), Query Frame = 1
Query:  223 KYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVN 813
            KYEK+ KIGEG+YGVV+K RN  T + +A+K+    ++D  +   A+REI +LK+++H N+V L +V   +++L+LVFEY D  +   +D       +P L+K   +Q L+ + +CH H  +HRD+KP+N+LI ++ +A+KL DFG AR    P   +T  V T WYR+PE+L+G   Y  PVDVW++GC+FAE+++
Sbjct:    3 KYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKRFLETEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVFEYCDHTVLHELDRYQRGVPEP-LVKNITWQTLQAVNFCHKHNCIHRDVKPENILITKQ-SAIKLCDFGFARLLTGPGDYYTDYVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLS 197          
BLAST of FC929471 vs. ExPASy Swiss-Prot
Match: CDK7_RAT (Cell division protein kinase 7 (Fragment) OS=Rattus norvegicus GN=Cdk7 PE=2 SV=2)

HSP 1 Score: 182.956 bits (463), Expect = 1.778e-45
Identity = 92/200 (46.00%), Postives = 132/200 (66.00%), Query Frame = 1
Query:  220 SKYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDE---GVPSTAIREISLLKEMQHGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMV 810
            ++ EK++ +GEG +  VYKAR+  TN+ +A+KKI+L    E   G+  TA+REI LL+E+ H NI+ L D    +  + LVF++++ DL+  +         P  IK ++   L+G+ Y H H +LHRDLKP NLL+D     LKLADFGLA++FG P   +TH+VVT WYRAPE+L G+R Y   VD+W+VGCI AE++
Sbjct:    2 NRNEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNISLVFDFMETDLEVIIKD-NSLVLTPSHIKAYMLMTLQGLEYLHQHWILHRDLKPNNLLLDEN-GVLKLADFGLAKSFGSPNWAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELL 199          
BLAST of FC929471 vs. ExPASy Swiss-Prot
Match: YP62_CAEEL (Putative serine/threonine-protein kinase B0495.2 OS=Caenorhabditis elegans GN=B0495.2 PE=2 SV=1)

HSP 1 Score: 182.57 bits (462), Expect = 2.322e-45
Identity = 96/203 (47.29%), Postives = 140/203 (68.97%), Query Frame = 1
Query:  223 KYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREIS-LLKEMQHGNIVRLQDVVHSEK--KLYLVFEYLDLDLKKHMDSCPDFANDPRLI----KTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMV 810
            +YE V ++ EGT+GVVY+ ++  T+E +ALK++++E+E EG P TA+REI+ LLK   H NIV +++++      K+Y+  E+++ D+K  +D+      + R      KT L Q+L GI + H   +LHRDLK  NLL+  +   LK+ADFGLAR +G P++ FT  VVTLWYR+PE+LLG+R YSTPVD+WSVGCI AE +
Sbjct:  355 EYECVNRVDEGTFGVVYRGKDKRTDEIVALKRLKMEKEKEGFPITALREINMLLKAGNHPNIVNVKEILLGSNMDKIYMAMEFVEHDMKSLLDTMS--RRNKRFSIGEQKTLLQQLLSGIEHMHKLWILHRDLKTSNLLMSHK-GILKIADFGLAREYGDPLKKFTSIVVTLWYRSPELLLGTRLYSTPVDMWSVGCIMAEFI 554          
BLAST of FC929471 vs. ExPASy Swiss-Prot
Match: CDKL4_MOUSE (Cyclin-dependent kinase-like 4 OS=Mus musculus GN=Cdkl4 PE=2 SV=1)

HSP 1 Score: 182.57 bits (462), Expect = 2.322e-45
Identity = 88/196 (44.90%), Postives = 134/196 (68.37%), Query Frame = 1
Query:  223 KYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMV 810
            KYEK+ KIGEG+YGVV+K RN  + + +A+KK    ++D  V   A+REI +LK+++H N+V L +V   ++K++LVFEY D  L   ++  P+  +D  +IK+ L+Q L+ + +CH H  +HRD+KP+N+LI ++   +K+ DFG AR   IP   +T  V T WYRAPE+L+G   Y + VDVW+VGC+FAE++
Sbjct:    3 KYEKLAKIGEGSYGVVFKCRNKSSGQVVAIKKFVESEDDRVVRKIALREIRMLKQLKHPNLVNLIEVFRRKRKMHLVFEYCDHTLLNELERNPNGVSD-GVIKSVLWQTLQALNFCHKHNCIHRDVKPENILITKQ-GMIKICDFGFARIL-IPGDAYTDYVATRWYRAPELLVGDTKYGSSVDVWAVGCVFAELL 195          
BLAST of FC929471 vs. ExPASy Swiss-Prot
Match: CDKL1_HUMAN (Cyclin-dependent kinase-like 1 OS=Homo sapiens GN=CDKL1 PE=2 SV=5)

HSP 1 Score: 181.415 bits (459), Expect = 5.174e-45
Identity = 85/201 (42.29%), Postives = 132/201 (65.67%), Query Frame = 1
Query:  223 KYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKKLYLVFEYLD----LDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVN 813
            KYEK+ KIGEG+YGVV+K RN  T + +A+KK    ++D  +   A+REI +LK+++H N+V L +V   +++L+LVFEY D     +L ++    P+      L+K+  +Q L+ + +CH H  +HRD+KP+N+LI +  + +KL DFG AR    P   +T  V T WYR+PE+L+G   Y  PVDVW++GC+FAE+++
Sbjct:    3 KYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVFEYCDHTVLHELDRYQRGVPE-----HLVKSITWQTLQAVNFCHKHNCIHRDVKPENILITKH-SVIKLCDFGFARLLAGPSDYYTDYVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLS 197          
BLAST of FC929471 vs. ExPASy Swiss-Prot
Match: CDK7_XENLA (Cell division protein kinase 7 OS=Xenopus laevis GN=cdk7 PE=1 SV=1)

HSP 1 Score: 181.03 bits (458), Expect = 6.757e-45
Identity = 91/203 (44.83%), Postives = 135/203 (66.50%), Query Frame = 1
Query:  211 SVGSKYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRL---EQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMV 810
            S   +YEK++ +GEG +  VYKAR+  T+  +A+KKI+L    + ++G+  TA+REI LL+E+ H NI+ L D    +  + LVF++++ DL+  +         P  IK+++   L+G+ Y H   +LHRDLKP NLL+D     LKLADFGLA++FG P R +TH+VVT WYR+PE+L G+R Y   VD+W+VGCI AE++
Sbjct:   13 SRAKQYEKLDFLGEGQFATVYKARDKNTDRIVAIKKIKLGHRAEANDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNISLVFDFMETDLEVIIKDT-SLVLTPAHIKSYMLMTLQGLEYLHHLWILHRDLKPNNLLLDEN-GVLKLADFGLAKSFGSPNRIYTHQVVTRWYRSPELLFGARMYGVGVDMWAVGCILAELL 213          
BLAST of FC929471 vs. ExPASy Swiss-Prot
Match: Y7597_DROME (Cell division cycle 2-like protein kinase CG7597 OS=Drosophila melanogaster GN=CG7597 PE=1 SV=1)

HSP 1 Score: 180.259 bits (456), Expect = 1.153e-44
Identity = 95/207 (45.89%), Postives = 132/207 (63.77%), Query Frame = 1
Query:  226 YEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEK----------KLYLVFEYLDLDLKKHMDS-CPDFANDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIP--VRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEM 807
            +E + +IGEGTYG VYKAR+  TN+ +ALKK+RLE E EG P TA+REI +L+++ H NIV L ++V  ++            YLVFEY+D DL   ++S   DF  +     + + Q+L G+ YCH    LHRD+K  N+L++ R   +KLADFGLAR +      R +T++V+TLWYR PE+LLG   Y   +DVWS GCI  E+
Sbjct:  804 FEMIAQIGEGTYGQVYKARDHHTNDMVALKKVRLEHEKEGFPITAVREIKILRQLNHRNIVNLHEIVTDKQDAVEFRKDKGSFYLVFEYMDHDLMGLLESGMVDFNEENN--ASIMKQLLDGLNYCHKKNFLHRDIKCSNILMNNR-GKVKLADFGLARLYNADDRERPYTNKVITLWYRPPELLLGEERYGPSIDVWSCGCILGEL 1007          
BLAST of FC929471 vs. ExPASy Swiss-Prot
Match: CDK13_MOUSE (Cell division protein kinase 13 OS=Mus musculus GN=Cdk13 PE=1 SV=2)

HSP 1 Score: 180.259 bits (456), Expect = 1.153e-44
Identity = 93/206 (45.15%), Postives = 135/206 (65.53%), Query Frame = 1
Query:  223 KYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEK----------KLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGI-PVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEM 807
            K++ +  IGEGTYG VYKAR+  T E +ALKK+RL+ E EG P TAIREI +L+++ H +I+ ++++V  ++            YLVFEY+D DL   ++S     N+   IK+F+ Q++ G+ YCH    LHRD+K  N+L++ R   +KLADFGLAR +     R +T++V+TLWYR PE+LLG   Y+  +DVWS GCI  E+
Sbjct:  704 KFDIIGIIGEGTYGQVYKARDKDTGEMVALKKVRLDNEKEGFPITAIREIKILRQLTHQSIINMKEIVTDKEDALDFKKDKGAFYLVFEYMDHDLMGLLESGLVHFNENH-IKSFMRQLMEGLDYCHKKNFLHRDIKCSNILLNNR-GQIKLADFGLARLYSSEESRPYTNKVITLWYRPPELLLGEERYTPAIDVWSCGCILGEL 907          
BLAST of FC929471 vs. ExPASy Swiss-Prot
Match: CDK13_HUMAN (Cell division protein kinase 13 OS=Homo sapiens GN=CDK13 PE=1 SV=2)

HSP 1 Score: 180.259 bits (456), Expect = 1.153e-44
Identity = 93/206 (45.15%), Postives = 135/206 (65.53%), Query Frame = 1
Query:  223 KYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEK----------KLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGI-PVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEM 807
            K++ +  IGEGTYG VYKAR+  T E +ALKK+RL+ E EG P TAIREI +L+++ H +I+ ++++V  ++            YLVFEY+D DL   ++S     N+   IK+F+ Q++ G+ YCH    LHRD+K  N+L++ R   +KLADFGLAR +     R +T++V+TLWYR PE+LLG   Y+  +DVWS GCI  E+
Sbjct:  704 KFDIIGIIGEGTYGQVYKARDKDTGEMVALKKVRLDNEKEGFPITAIREIKILRQLTHQSIINMKEIVTDKEDALDFKKDKGAFYLVFEYMDHDLMGLLESGLVHFNENH-IKSFMRQLMEGLDYCHKKNFLHRDIKCSNILLNNR-GQIKLADFGLARLYSSEESRPYTNKVITLWYRPPELLLGEERYTPAIDVWSCGCILGEL 907          
BLAST of FC929471 vs. ExPASy Swiss-Prot
Match: CDK11_DICDI (PITSVRE serine/threonine protein-kinase cdk11 OS=Dictyostelium discoideum GN=cdk11 PE=3 SV=1)

HSP 1 Score: 180.259 bits (456), Expect = 1.153e-44
Identity = 89/198 (44.95%), Postives = 138/198 (69.70%), Query Frame = 1
Query:  226 YEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEK--KLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVN 813
            ++K+  I EG +GVVY A++  T E +ALKKI++E+E EG+P T++REI +L E++H NIV+++++V  +    +++  E++D DL+  M+        P  IKT + Q+L G++Y H + V+HRDLK  NLL   +   LK+ADFGLAR +G P++  +  VVTLWYRAPE+LL +  Y+  +D+WSVGCIFAE+++
Sbjct:   52 FKKLYTINEGAFGVVYCAQDKETEEIVALKKIKMEREREGIPITSVREIKVLMELKHDNIVQIKEIVLGKNINSIFMAMEFIDHDLRGLMEVIKK-PFLPSEIKTLIQQLLNGVSYMHDNWVIHRDLKTANLLYTNK-GVLKIADFGLAREYGSPLKPLSKGVVTLWYRAPELLLDTEIYTPAIDIWSVGCIFAEIIS 247          
The following BLAST results are available for this feature:
BLAST of FC929471 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CDKL1_MOUSE1.778e-4543.15Cyclin-dependent kinase-like 1 OS=Mus musculus GN=... [more]
CDK7_RAT1.778e-4546.00Cell division protein kinase 7 (Fragment) OS=Rattu... [more]
YP62_CAEEL2.322e-4547.29Putative serine/threonine-protein kinase B0495.2 O... [more]
CDKL4_MOUSE2.322e-4544.90Cyclin-dependent kinase-like 4 OS=Mus musculus GN=... [more]
CDKL1_HUMAN5.174e-4542.29Cyclin-dependent kinase-like 1 OS=Homo sapiens GN=... [more]
CDK7_XENLA6.757e-4544.83Cell division protein kinase 7 OS=Xenopus laevis G... [more]
Y7597_DROME1.153e-4445.89Cell division cycle 2-like protein kinase CG7597 O... [more]
CDK13_MOUSE1.153e-4445.15Cell division protein kinase 13 OS=Mus musculus GN... [more]
CDK13_HUMAN1.153e-4445.15Cell division protein kinase 13 OS=Homo sapiens GN... [more]
CDK11_DICDI1.153e-4444.95PITSVRE serine/threonine protein-kinase cdk11 OS=D... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAH2CE06RM1 PhII-IIIV1 Citrus clementina cDNA clone KN0AAH2CE06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929471 ID=FC929471; Name=FC929471; organism=Citrus clementina; type=EST; length=815bp
GGCACGAGGCTAAAACTCACTTCTTTCACCGCCGCCGCTGCCTCCAATCA
CCTCACTCTTACTCCGGCGATCTCCCCCGTCGGCTTGGATCGTCCTCGCG
TCTGTTACTGTATTATGCATTTGTATTTTTCTCTTTCGTAAGCGGTTAAT
TTTTTCTTCATAACACACTGCCGCCACCTACGCCGTCGATTCGTGCCGTT
CTTGTCGCCGTCCGTCGGTAGCAAGTATGAAAAGGTTGAGAAGATTGGTG
AAGGAACCTATGGAGTAGTTTACAAGGCCCGTAATTGTGTCACGAATGAG
ACAATAGCATTGAAGAAGATCCGCCTTGAGCAGGAAGATGAAGGTGTGCC
TAGCACCGCAATTAGAGAAATTTCCCTCTTGAAAGAAATGCAGCATGGGA
ACATTGTTAGGTTGCAAGATGTAGTGCATAGCGAGAAGAAACTTTATCTG
GTTTTCGAGTATTTGGACTTGGATTTGAAGAAGCACATGGATTCTTGCCC
AGATTTTGCTAATGATCCTCGTCTGATAAAAACATTCCTTTATCAAATTC
TACGTGGCATTGCCTACTGCCATTCTCACCGGGTTCTTCATCGAGATTTG
AAACCACAAAATTTGCTAATAGATCGTCGTACGAATGCACTAAAGCTTGC
AGATTTTGGACTGGCCAGGGCTTTTGGTATTCCTGTTAGGACATTTACAC
ATGAGGTGGTGACATTGTGGTACAGAGCACCTGAAATATTACTAGGATCT
CGCCATTACTCTACTCCAGTTGATGTGTGGTCGGTGGGATGTATATTTGC
TGAGATGGTGAACCA
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