FC929471

Overview
NameFC929471
Unique NameFC929471
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length815
Libraries
Library NameType
PhII-IIIV1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15041 contig Ccv1_Contig15041:1..815. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC929471 vs. ExPASy Swiss-Prot
Match: CDC2_HUMAN (Cell division control protein 2 homolog OS=Homo sapiens GN=CDC2 PE=1 SV=2)

HSP 1 Score: 277.715 bits (709), Expect = 5.305e-74
Identity = 132/195 (67.69%), Postives = 163/195 (83.59%), Query Frame = 1
Query:  226 YEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFA-NDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEM 807
            Y K+EKIGEGTYGVVYK R+  T + +A+KKIRLE E+EGVPSTAIREISLLKE++H NIV LQDV+  + +LYL+FE+L +DLKK++DS P     D  L+K++LYQIL+GI +CHS RVLHRDLKPQNLLID +   +KLADFGLARAFGIP+R +THE +TLWYR+PE+LLGS  YSTPVD+WS+G IFAE+
Sbjct:    4 YTKIEKIGEGTYGVVYKGRHKTTGQVVAMKKIRLESEEEGVPSTAIREISLLKELRHPNIVSLQDVLMQDSRLYLIFEFLSMDLKKYLDSIPPGQYMDSSLVKSYLYQILQGIVFCHSRRVLHRDLKPQNLLIDDK-GTIKLADFGLARAFGIPIRVYTHEAITLWYRSPEVLLGSARYSTPVDIWSIGTIFAEL 197          
BLAST of FC929471 vs. ExPASy Swiss-Prot
Match: CDC2B_XENLA (Cell division control protein 2-B OS=Xenopus laevis GN=cdc2-B PE=1 SV=2)

HSP 1 Score: 277.33 bits (708), Expect = 6.928e-74
Identity = 137/196 (69.90%), Postives = 163/196 (83.16%), Query Frame = 1
Query:  223 KYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFAN-DPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEM 807
            +Y K+EKIGEGTYGVVYK R+  T + +A+KKIRLE E+EGVPSTAIREISLLKE+QH NIV L DV+  + +LYL+FE+L +DLKK++DS P     D  L+K++LYQIL+GI +CHS RVLHRDLKPQNLLID +   +KLADFGLARAFGIPVR +THEVVTLWYRA E+LLGS  YSTPVDVWSVG IFAE+
Sbjct:    3 EYTKIEKIGEGTYGVVYKGRHKATGQVVAMKKIRLENEEEGVPSTAIREISLLKELQHPNIVCLLDVLMQDSRLYLIFEFLSMDLKKYLDSIPSGQYIDTMLVKSYLYQILQGIVFCHSRRVLHRDLKPQNLLIDNK-GVIKLADFGLARAFGIPVRVYTHEVVTLWYRASEVLLGSVRYSTPVDVWSVGTIFAEI 197          
BLAST of FC929471 vs. ExPASy Swiss-Prot
Match: CDC2_ORYCU (Cell division control protein 2 homolog OS=Oryzias curvinotus GN=cdc2 PE=2 SV=1)

HSP 1 Score: 276.559 bits (706), Expect = 1.182e-73
Identity = 132/195 (67.69%), Postives = 162/195 (83.08%), Query Frame = 1
Query:  226 YEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFA-NDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEM 807
            Y K+EKIGEGTYGVVYK R+  T + +A+KKIRLE E+EGVPSTA+RE+SLL+E++H N+VRL DV+  E +LYL+FE+L +DLKK++DS P     DP L+K++LYQIL GI +CH  RVLHRDLKPQNLLID +   +KLADFGL+RAFG+PVR +THEVVTLWYRAPE+LLGS  YSTPVDVWS G IFAE+
Sbjct:    4 YVKIEKIGEGTYGVVYKGRHKSTGQVVAMKKIRLESEEEGVPSTAVREVSLLQELKHPNVVRLLDVLMQESRLYLIFEFLSMDLKKYLDSIPSGQYMDPMLVKSYLYQILEGIYFCHRRRVLHRDLKPQNLLIDNK-GVIKLADFGLSRAFGVPVRVYTHEVVTLWYRAPEVLLGSPRYSTPVDVWSTGTIFAEL 197          
BLAST of FC929471 vs. ExPASy Swiss-Prot
Match: CDC2H_PLAYO (Cell division control protein 2 homolog OS=Plasmodium yoelii yoelii GN=CRK2 PE=3 SV=1)

HSP 1 Score: 276.559 bits (706), Expect = 1.182e-73
Identity = 139/198 (70.20%), Postives = 166/198 (83.84%), Query Frame = 1
Query:  223 KYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPST-AIREISLLKEMQHGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVN 813
            KY  +EKIGEGTYGVVYKA+N    E+ ALKKIRLE+EDEG+PST +IREIS+LKE++H NIV+L DV+H++K+L LVFE+LD DLKK +D C D   +    K+FL Q+L GIAYCH HRVLHRDLKPQNLLI+R    LK+ADFGLARAFGIP R +THEVVTLWYRAP+IL+GS+ YSTP+D+WSVGCIFAEMVN
Sbjct:    3 KYHGLEKIGEGTYGVVYKAQNS-DGESFALKKIRLEKEDEGIPSTVSIREISILKELRHSNIVKLYDVIHAKKRLILVFEHLDQDLKKLIDVC-DGGLESVTAKSFLLQLLNGIAYCHEHRVLHRDLKPQNLLINRE-GELKIADFGLARAFGIPARRYTHEVVTLWYRAPDILMGSKKYSTPIDIWSVGCIFAEMVN 197          
BLAST of FC929471 vs. ExPASy Swiss-Prot
Match: CDC2H_PLAFK (Cell division control protein 2 homolog OS=Plasmodium falciparum (isolate K1 / Thailand) GN=CRK2 PE=1 SV=1)

HSP 1 Score: 275.404 bits (703), Expect = 2.633e-73
Identity = 137/197 (69.54%), Postives = 164/197 (83.25%), Query Frame = 1
Query:  223 KYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVN 813
            KY  +EKIGEGTYGVVYKA+N    ET ALKKIRLE+EDEG+PST IREIS+LKE++H NIV+L DV+H++K+L LVFE+LD DLKK +D C +   +    K+FL Q+L GIAYCH  RVLHRDLKPQNLLI+R    LK+ADFGLARAFGIPVR +THEVVTLWYRAP++L+GS+ YST +D+WSVGCIFAEMVN
Sbjct:    3 KYHGLEKIGEGTYGVVYKAQNNY-GETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVC-EGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLINRE-GELKIADFGLARAFGIPVRKYTHEVVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVN 196          
BLAST of FC929471 vs. ExPASy Swiss-Prot
Match: CDC2H_PLAF7 (Cell division control protein 2 homolog OS=Plasmodium falciparum (isolate 3D7) GN=CRK2 PE=3 SV=1)

HSP 1 Score: 275.404 bits (703), Expect = 2.633e-73
Identity = 137/197 (69.54%), Postives = 164/197 (83.25%), Query Frame = 1
Query:  223 KYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVN 813
            KY  +EKIGEGTYGVVYKA+N    ET ALKKIRLE+EDEG+PST IREIS+LKE++H NIV+L DV+H++K+L LVFE+LD DLKK +D C +   +    K+FL Q+L GIAYCH  RVLHRDLKPQNLLI+R    LK+ADFGLARAFGIPVR +THEVVTLWYRAP++L+GS+ YST +D+WSVGCIFAEMVN
Sbjct:    3 KYHGLEKIGEGTYGVVYKAQNNY-GETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVC-EGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLINRE-GELKIADFGLARAFGIPVRKYTHEVVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVN 196          
BLAST of FC929471 vs. ExPASy Swiss-Prot
Match: CDC2_DROME (Cell division control protein 2 homolog OS=Drosophila melanogaster GN=cdc2 PE=1 SV=1)

HSP 1 Score: 275.018 bits (702), Expect = 3.438e-73
Identity = 130/195 (66.67%), Postives = 163/195 (83.59%), Query Frame = 1
Query:  226 YEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCP-DFANDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEM 807
            +EK+EKIGEGTYGVVYK RN +T + +A+KKIRLE +DEGVPSTAIREISLLKE++H NIV L+DV+  E ++YL+FE+L +DLKK+MDS P D   +  L++++LYQI   I +CH  RVLHRDLKPQNLLID ++  +K+ADFGL R+FGIPVR +THE+VTLWYRAPE+LLGS  YS PVD+WS+GCIFAEM
Sbjct:    4 FEKIEKIGEGTYGVVYKGRNRLTGQIVAMKKIRLESDDEGVPSTAIREISLLKELKHENIVCLEDVLMEENRIYLIFEFLSMDLKKYMDSLPVDKHMESELVRSYLYQITSAILFCHRRRVLHRDLKPQNLLID-KSGLIKVADFGLGRSFGIPVRIYTHEIVTLWYRAPEVLLGSPRYSCPVDIWSIGCIFAEM 197          
BLAST of FC929471 vs. ExPASy Swiss-Prot
Match: CDK5_XENLA (Cell division protein kinase 5 OS=Xenopus laevis GN=cdk5 PE=2 SV=1)

HSP 1 Score: 274.248 bits (700), Expect = 5.865e-73
Identity = 130/197 (65.99%), Postives = 166/197 (84.26%), Query Frame = 1
Query:  223 KYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVN 813
            KYEK+EKIGEGTYG V+KA+N  T+E +ALK++RL+ +DEGVPS+A+REI LLKE++H NIVRL DV+HS+KKL LVFE+ D DLKK+ DSC +   DP ++K+F+YQ+L+G+A+CHS  VLHRDLKPQNLLI+ R   LKLADFGLARAFGIPVR ++ EVVTLWYR P++L G++ YST +D+WS GCIFAE+ N
Sbjct:    3 KYEKLEKIGEGTYGTVFKAKNRDTHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSC-NGDLDPEIVKSFMYQLLKGLAFCHSRNVLHRDLKPQNLLIN-RNGELKLADFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELAN 197          
BLAST of FC929471 vs. ExPASy Swiss-Prot
Match: CDC2_CHICK (Cell division control protein 2 homolog OS=Gallus gallus GN=CDC2 PE=1 SV=1)

HSP 1 Score: 273.863 bits (699), Expect = 7.660e-73
Identity = 133/195 (68.21%), Postives = 162/195 (83.08%), Query Frame = 1
Query:  226 YEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFAN-DPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEM 807
            Y K+EKIGEGTYGVVYK R+  T + +A+KKIRLE E+EGVPSTAIREISLLKE+ H NIV LQDV+  + +LYL+FE+L +DLKK++D+ P     D   +K++LYQIL+GI +CHS RVLHRDLKPQNLLID +   +KLADFGLARAFGIPVR +THEVVTLWYR+PE+LLGS  YSTPVD+WS+G IFAE+
Sbjct:    4 YTKIEKIGEGTYGVVYKGRHKTTGQVVAMKKIRLESEEEGVPSTAIREISLLKELHHPNIVCLQDVLMQDARLYLIFEFLSMDLKKYLDTIPSGQYLDRSRVKSYLYQILQGIVFCHSRRVLHRDLKPQNLLIDDK-GVIKLADFGLARAFGIPVRVYTHEVVTLWYRSPEVLLGSALYSTPVDIWSIGTIFAEL 197          
BLAST of FC929471 vs. ExPASy Swiss-Prot
Match: CDC2_RANDY (Cell division control protein 2 homolog OS=Rana dybowskii GN=CDC2 PE=2 SV=1)

HSP 1 Score: 273.478 bits (698), Expect = 1.000e-72
Identity = 134/198 (67.68%), Postives = 164/198 (82.83%), Query Frame = 1
Query:  223 KYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFAN-DPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVN 813
            +Y K+EKIGEGTYGVVYK  +  T + +A+KKIRLE E+EGVPSTAIREISLLKE+QH NIV L DV+  + +LYL+FE+L +DLKK++DS P     +  L+K++LYQIL+GI +CH+ RVLHRDLKPQNLLID +   +KLADFGLARAFGIPVR +THEVVTLWYRAPE+LLGS  YSTPVDVWS+G IFAE+ +
Sbjct:    3 EYAKIEKIGEGTYGVVYKGVHKATGQIVAMKKIRLENEEEGVPSTAIREISLLKELQHPNIVCLLDVLMQDSRLYLIFEFLSMDLKKYLDSIPSGQYLEAMLVKSYLYQILQGIIFCHARRVLHRDLKPQNLLIDSK-GVIKLADFGLARAFGIPVRVYTHEVVTLWYRAPEVLLGSVRYSTPVDVWSIGTIFAEIAS 199          
The following BLAST results are available for this feature:
BLAST of FC929471 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CDC2_HUMAN5.305e-7467.69Cell division control protein 2 homolog OS=Homo sa... [more]
CDC2B_XENLA6.928e-7469.90Cell division control protein 2-B OS=Xenopus laevi... [more]
CDC2_ORYCU1.182e-7367.69Cell division control protein 2 homolog OS=Oryzias... [more]
CDC2H_PLAYO1.182e-7370.20Cell division control protein 2 homolog OS=Plasmod... [more]
CDC2H_PLAFK2.633e-7369.54Cell division control protein 2 homolog OS=Plasmod... [more]
CDC2H_PLAF72.633e-7369.54Cell division control protein 2 homolog OS=Plasmod... [more]
CDC2_DROME3.438e-7366.67Cell division control protein 2 homolog OS=Drosoph... [more]
CDK5_XENLA5.865e-7365.99Cell division protein kinase 5 OS=Xenopus laevis G... [more]
CDC2_CHICK7.660e-7368.21Cell division control protein 2 homolog OS=Gallus ... [more]
CDC2_RANDY1.000e-7267.68Cell division control protein 2 homolog OS=Rana dy... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAH2CE06RM1 PhII-IIIV1 Citrus clementina cDNA clone KN0AAH2CE06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929471 ID=FC929471; Name=FC929471; organism=Citrus clementina; type=EST; length=815bp
GGCACGAGGCTAAAACTCACTTCTTTCACCGCCGCCGCTGCCTCCAATCA
CCTCACTCTTACTCCGGCGATCTCCCCCGTCGGCTTGGATCGTCCTCGCG
TCTGTTACTGTATTATGCATTTGTATTTTTCTCTTTCGTAAGCGGTTAAT
TTTTTCTTCATAACACACTGCCGCCACCTACGCCGTCGATTCGTGCCGTT
CTTGTCGCCGTCCGTCGGTAGCAAGTATGAAAAGGTTGAGAAGATTGGTG
AAGGAACCTATGGAGTAGTTTACAAGGCCCGTAATTGTGTCACGAATGAG
ACAATAGCATTGAAGAAGATCCGCCTTGAGCAGGAAGATGAAGGTGTGCC
TAGCACCGCAATTAGAGAAATTTCCCTCTTGAAAGAAATGCAGCATGGGA
ACATTGTTAGGTTGCAAGATGTAGTGCATAGCGAGAAGAAACTTTATCTG
GTTTTCGAGTATTTGGACTTGGATTTGAAGAAGCACATGGATTCTTGCCC
AGATTTTGCTAATGATCCTCGTCTGATAAAAACATTCCTTTATCAAATTC
TACGTGGCATTGCCTACTGCCATTCTCACCGGGTTCTTCATCGAGATTTG
AAACCACAAAATTTGCTAATAGATCGTCGTACGAATGCACTAAAGCTTGC
AGATTTTGGACTGGCCAGGGCTTTTGGTATTCCTGTTAGGACATTTACAC
ATGAGGTGGTGACATTGTGGTACAGAGCACCTGAAATATTACTAGGATCT
CGCCATTACTCTACTCCAGTTGATGTGTGGTCGGTGGGATGTATATTTGC
TGAGATGGTGAACCA
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