FC929471

Overview
NameFC929471
Unique NameFC929471
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length815
Libraries
Library NameType
PhII-IIIV1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC929471 vs. ExPASy Swiss-Prot
Match: JNK1_CAEEL (Stress-activated protein kinase jnk-1 OS=Caenorhabditis elegans GN=jnk-1 PE=1 SV=2)

HSP 1 Score: 125.561 bits (314), Expect = 3.369e-28
Identity = 78/204 (38.24%), Postives = 114/204 (55.88%), Query Frame = 1
Query:  223 KYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKK------LYLVFEYLDLDLKK--HMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMV 810
            +Y+ +  IG G  G+V  A + V NE +A+KK+    ++      A RE+ L+  + H NI+ + +    +KK      LY+V E +D +L +   MD       D   +   LYQ+L GI + HS  ++HRDLKP N+++ R    LK+ DFGLAR   I     T  VVT +YRAPE++LG   Y   VDVWS+GCIF E++
Sbjct:  118 RYQNLRLIGSGAQGIVCSAFDTVRNEQVAIKKLSRPFQNVTHAKRAYRELKLMSLVNHKNIIGILNCFTPQKKLDEFNDLYIVMELMDANLCQVIQMDL------DHERLSYLLYQMLCGIRHLHSAGIIHRDLKPSNIVV-RSDCTLKILDFGLART-AIEAFMMTPYVVTRYYRAPEVILG-MGYKENVDVWSIGCIFGELI 312          
BLAST of FC929471 vs. ExPASy Swiss-Prot
Match: HOG1_GIBIN (Mitogen-activated protein kinase HOG1 (Fragment) OS=Gibberella intermedia GN=HOG1 PE=3 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 4.400e-28
Identity = 73/170 (42.94%), Postives = 102/170 (60.00%), Query Frame = 1
Query:  304 IALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSE-KKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMV 810
            +A+KKI        +     RE+ LLK ++H N++ L D+  S  + +Y V E L  DL + + S P    + + I+ FLYQI+RG+ Y HS  V+HRDLKP N+L++   + LK+ DFGLAR   I     T  V T +YRAPEI+L  + Y   VD+WS GCIFAEM+
Sbjct:    1 VAVKKIMKPFSTPVLAKRTYRELKLLKHLKHENVISLSDIFISPLEDIYFVTELLGTDLHRLLTSRP---LEKQFIQYFLYQIMRGLKYVHSAGVVHRDLKPSNILVNENCD-LKICDFGLAR---IQDPQMTGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEML 163          
BLAST of FC929471 vs. ExPASy Swiss-Prot
Match: HOG1_FUSCU (Mitogen-activated protein kinase HOG1 (Fragment) OS=Fusarium culmorum GN=HOG1 PE=3 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 4.400e-28
Identity = 73/170 (42.94%), Postives = 102/170 (60.00%), Query Frame = 1
Query:  304 IALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSE-KKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMV 810
            +A+KKI        +     RE+ LLK ++H N++ L D+  S  + +Y V E L  DL + + S P    + + I+ FLYQI+RG+ Y HS  V+HRDLKP N+L++   + LK+ DFGLAR   I     T  V T +YRAPEI+L  + Y   VD+WS GCIFAEM+
Sbjct:    1 VAVKKIMKPFSTPVLAKRTYRELKLLKHLKHENVISLSDIFISPLEDIYFVTELLGTDLHRLLTSRP---LEKQFIQYFLYQIMRGLKYVHSAGVVHRDLKPSNILVNENCD-LKICDFGLAR---IQDPQMTGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEML 163          
BLAST of FC929471 vs. ExPASy Swiss-Prot
Match: GSK3_CAEBR (Glycogen synthase kinase-3 OS=Caenorhabditis briggsae GN=gsk-3 PE=3 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 5.747e-28
Identity = 72/208 (34.62%), Postives = 117/208 (56.25%), Query Frame = 1
Query:  226 YEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHS------EKKLYLVFEYLDLDL-------KKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMV 810
            Y   + IG G++GVV+ A+   TNE +A+KK+  ++  +       RE+ +++++ H NIV+L+   +S      E  L L+ EY+   +        K   S P        +K ++YQ+LR +AY HS  + HRD+KPQNLLID  T  LKL DFG A+ + +        + + +YRAPE++ G+ +Y+  +DVWS G + AE++
Sbjct:   36 YYDQKVIGNGSFGVVFLAKLSTTNEMVAIKKVLQDKRFKN------RELQIMRKLNHPNIVKLKYFFYSSGDKKDELYLNLILEYVPETVYRVARHYSKQRQSIPMI-----YVKLYMYQLLRSLAYIHSIGICHRDIKPQNLLIDPETGILKLCDFGSAK-YLVRNEPNVSYICSRYYRAPELIFGATNYTNSIDVWSAGTVIAELL 231          
BLAST of FC929471 vs. ExPASy Swiss-Prot
Match: MK10_RAT (Mitogen-activated protein kinase 10 OS=Rattus norvegicus GN=Mapk10 PE=1 SV=2)

HSP 1 Score: 124.02 bits (310), Expect = 9.803e-28
Identity = 77/206 (37.38%), Postives = 115/206 (55.83%), Query Frame = 1
Query:  211 SVGSKYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKKL------YLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMV 810
            +V  +Y+ ++ IG G  G+V  A + V +  +A+KK+    +++     A RE+ L+K + H NI+ L +V   +K L      YLV E +D +L + +        D   +   LYQ+L  I + HS  ++HRDLKP N+++ +    LK+ DFGLAR  G      T  VVT +YRAPE++LG   Y   VD+WSVGCI  EMV
Sbjct:   59 TVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVI----QMELDHERMSYLLYQMLSAIKHLHSAGIIHRDLKPSNIVV-KSDCTLKILDFGLARTAGTSF-MMTPYVVTRYYRAPEVILG-MGYKENVDIWSVGCIMGEMV 257          
BLAST of FC929471 vs. ExPASy Swiss-Prot
Match: KSG7_ARATH (Shaggy-related protein kinase eta OS=Arabidopsis thaliana GN=ASK7 PE=1 SV=2)

HSP 1 Score: 124.02 bits (310), Expect = 9.803e-28
Identity = 76/213 (35.68%), Postives = 119/213 (55.87%), Query Frame = 1
Query:  208 PSVGSKYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHS-----EKKLYLVFEYLDLDLK---KHMDSCPDFANDPR---LIKTFLYQILRGIAYCHSHR-VLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMV 810
            P     Y     +G G++G+V++A+   T ET+A+KK+  ++  +       RE+ L++ M H N+V L+    S     E  L LV EY+   L    KH  S    AN       +K ++YQI RG+AY H+   V HRDLKPQNLL+D  T+ +K+ DFG A+         ++ + + +YRAPE++ G+  Y+T +D+WS GC+ AE++
Sbjct:   34 PKQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN------RELQLMRVMDHPNVVCLKHCFFSTTSKDELFLNLVMEYVPESLYRVLKHYSS----ANQRMPLVYVKLYMYQIFRGLAYIHNVAGVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLVKGEANISY-ICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELL 235          
BLAST of FC929471 vs. ExPASy Swiss-Prot
Match: JNK1_ANCCA (Stress-activated protein kinase JNK-1 OS=Ancylostoma caninum GN=JNK-1 PE=2 SV=2)

HSP 1 Score: 124.02 bits (310), Expect = 9.803e-28
Identity = 79/204 (38.73%), Postives = 112/204 (54.90%), Query Frame = 1
Query:  223 KYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRL------QDVVHSEKKLYLVFEYLDLDLKK--HMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMV 810
            +YE +  IG G  G+V  A + VTN+ +A+KK+    ++      A RE  L+  + H NI+ L      Q  V     LY+V E +D +L +   MD       D   +   LYQ+L GI + HS  ++HRDLKP N+++ +    LK+ DFGLAR   +     T  VVT +YRAPE++LG   Y   VDVWSVGCIF E++
Sbjct:   25 RYENLRLIGSGAQGIVCAATDMVTNKPVAIKKLSRPFQNVTHAKRAYREFILMNLVNHKNIIGLLNAFSPQREVEEFNDLYIVMELMDANLCQVIQMDL------DHERLSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV-KSDCTLKILDFGLART-AVEAFMMTPYVVTRYYRAPEVILG-MGYGENVDVWSVGCIFGELI 219          
BLAST of FC929471 vs. ExPASy Swiss-Prot
Match: GSK31_SCHPO (Protein kinase gsk31 OS=Schizosaccharomyces pombe GN=gsk31 PE=1 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 9.803e-28
Identity = 71/207 (34.30%), Postives = 114/207 (55.07%), Query Frame = 1
Query:  226 YEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHS------EKKLYLVFEYLDLDLKKHM-------DSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEM 807
            YE    +G G++GVV +A+   T   IA+K++  ++  +       RE+ +++ + H NI++L    H+      E  L L+ EY+   +   M        S P+ +     IK + +Q+ R +AY HS  V HRD+KPQNLL+D +T  LKL DFG A+   +P       + + +YRAPE++ G+ HY+T +DVWS  C+ AE+
Sbjct:   25 YEPCRVLGSGSFGVVIQAKLVGTPGFIAVKRVLQDKRYKN------RELQIMRAISHPNIIKLIAFFHTHNPSKDETHLCLLLEYMPETVFDDMRWYTRRRKSIPNLS-----IKLYAFQLFRALAYLHSTGVCHRDIKPQNLLVDYKTGILKLCDFGSAKVL-VPSEPNVSYICSRYYRAPELVFGATHYTTKIDVWSAACVIAEL 219          
BLAST of FC929471 vs. ExPASy Swiss-Prot
Match: FUS3_YEAST (Mitogen-activated protein kinase FUS3 OS=Saccharomyces cerevisiae GN=FUS3 PE=1 SV=2)

HSP 1 Score: 124.02 bits (310), Expect = 9.803e-28
Identity = 78/215 (36.28%), Postives = 117/215 (54.42%), Query Frame = 1
Query:  211 SVGSKYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPST-AIREISLLKEMQHGNIVRLQDVVHSEK-----KLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRT----------FTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEM 807
            ++ S ++    +GEG YGVV  A +  T E +A+KKI  E  D+ + +   +REI +LK  +H NI+ + ++   +      ++Y++ E +  DL + + +     +D   I+ F+YQ LR +   H   V+HRDLKP NLLI+   + LK+ DFGLAR                   T  V T WYRAPE++L S  YS  +DVWS GCI AE+
Sbjct:    8 NISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKI--EPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVIST--QMLSDDH-IQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLINSNCD-LKVCDFGLARIIDESAADNSEPTGQQSGMTEYVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAEL 216          
BLAST of FC929471 vs. ExPASy Swiss-Prot
Match: MK09_MOUSE (Mitogen-activated protein kinase 9 OS=Mus musculus GN=Mapk9 PE=1 SV=2)

HSP 1 Score: 123.635 bits (309), Expect = 1.280e-27
Identity = 81/208 (38.94%), Postives = 118/208 (56.73%), Query Frame = 1
Query:  211 SVGSKYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKKL------YLVFEYLDLDLKK--HMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMV 810
            +V  +Y++++ IG G  G+V  A + V    +A+KK+    +++     A RE+ LLK + H NI+ L +V   +K L      YLV E +D +L +  HM+       D   +   LYQ+L GI + HS  ++HRDLKP N+++ +    LK+ DFGLAR         T  VVT +YRAPE++LG   Y   VD+WSVGCI AEMV
Sbjct:   21 TVLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIHMEL------DHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV-KSDCTLKILDFGLART-ACTNFMMTPYVVTRYYRAPEVILG-MGYKENVDIWSVGCIMAEMV 219          
The following BLAST results are available for this feature:
BLAST of FC929471 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
JNK1_CAEEL3.369e-2838.24Stress-activated protein kinase jnk-1 OS=Caenorhab... [more]
HOG1_GIBIN4.400e-2842.94Mitogen-activated protein kinase HOG1 (Fragment) O... [more]
HOG1_FUSCU4.400e-2842.94Mitogen-activated protein kinase HOG1 (Fragment) O... [more]
GSK3_CAEBR5.747e-2834.62Glycogen synthase kinase-3 OS=Caenorhabditis brigg... [more]
MK10_RAT9.803e-2837.38Mitogen-activated protein kinase 10 OS=Rattus norv... [more]
KSG7_ARATH9.803e-2835.68Shaggy-related protein kinase eta OS=Arabidopsis t... [more]
JNK1_ANCCA9.803e-2838.73Stress-activated protein kinase JNK-1 OS=Ancylosto... [more]
GSK31_SCHPO9.803e-2834.30Protein kinase gsk31 OS=Schizosaccharomyces pombe ... [more]
FUS3_YEAST9.803e-2836.28Mitogen-activated protein kinase FUS3 OS=Saccharom... [more]
MK09_MOUSE1.280e-2738.94Mitogen-activated protein kinase 9 OS=Mus musculus... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAH2CE06RM1 PhII-IIIV1 Citrus clementina cDNA clone KN0AAH2CE06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929471 ID=FC929471; Name=FC929471; organism=Citrus clementina; type=EST; length=815bp
GGCACGAGGCTAAAACTCACTTCTTTCACCGCCGCCGCTGCCTCCAATCA
CCTCACTCTTACTCCGGCGATCTCCCCCGTCGGCTTGGATCGTCCTCGCG
TCTGTTACTGTATTATGCATTTGTATTTTTCTCTTTCGTAAGCGGTTAAT
TTTTTCTTCATAACACACTGCCGCCACCTACGCCGTCGATTCGTGCCGTT
CTTGTCGCCGTCCGTCGGTAGCAAGTATGAAAAGGTTGAGAAGATTGGTG
AAGGAACCTATGGAGTAGTTTACAAGGCCCGTAATTGTGTCACGAATGAG
ACAATAGCATTGAAGAAGATCCGCCTTGAGCAGGAAGATGAAGGTGTGCC
TAGCACCGCAATTAGAGAAATTTCCCTCTTGAAAGAAATGCAGCATGGGA
ACATTGTTAGGTTGCAAGATGTAGTGCATAGCGAGAAGAAACTTTATCTG
GTTTTCGAGTATTTGGACTTGGATTTGAAGAAGCACATGGATTCTTGCCC
AGATTTTGCTAATGATCCTCGTCTGATAAAAACATTCCTTTATCAAATTC
TACGTGGCATTGCCTACTGCCATTCTCACCGGGTTCTTCATCGAGATTTG
AAACCACAAAATTTGCTAATAGATCGTCGTACGAATGCACTAAAGCTTGC
AGATTTTGGACTGGCCAGGGCTTTTGGTATTCCTGTTAGGACATTTACAC
ATGAGGTGGTGACATTGTGGTACAGAGCACCTGAAATATTACTAGGATCT
CGCCATTACTCTACTCCAGTTGATGTGTGGTCGGTGGGATGTATATTTGC
TGAGATGGTGAACCA
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