FC929471

Overview
NameFC929471
Unique NameFC929471
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length815
Libraries
Library NameType
PhII-IIIV1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC929471 vs. ExPASy Swiss-Prot
Match: MK08A_CYPCA (Mitogen-activated protein kinase 8A OS=Cyprinus carpio GN=mapk8a PE=2 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 1.280e-27
Identity = 78/206 (37.86%), Postives = 115/206 (55.83%), Query Frame = 1
Query:  211 SVGSKYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKKL------YLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMV 810
            +V  +Y+ +  IG G  G+V  A +      +A+KK+    +++     A RE+ L+K + H NI+ L +V  S+K L      YLV E +D +L + +        D   +   LYQ+L GI + HS  ++HRDLKP N+++ +    LK+ DFGLAR     +   T  VVT +YRAPE++LG   Y   VD+WSVGCI AEMV
Sbjct:   21 TVLKRYQNLRPIGSGAQGIVCSAYDHNLERNVAIKKLSRPFQNQTHAKRAYRELVLMKYVNHKNIICLLNVFTSQKTLDEFQDVYLVMELMDANLCQVI----QMELDHERLSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV-KSDCTLKILDFGLARTAATGL-LMTPYVVTRYYRAPEVILG-MGYQANVDIWSVGCILAEMV 219          
BLAST of FC929471 vs. ExPASy Swiss-Prot
Match: MK04_MOUSE (Mitogen-activated protein kinase 4 OS=Mus musculus GN=Mapk4 PE=2 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 1.280e-27
Identity = 74/216 (34.26%), Postives = 118/216 (54.63%), Query Frame = 1
Query:  214 VGSKYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKK-----------LYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHE------VVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMV 810
            +G ++   + +G G  G+V  A +      +A+KKI L   D      A+REI +++ + H NIV++ +V+  +              Y+V EY++ DL   ++      +  +L   F+YQ+LRG+ Y HS  VLHRDLKP N+ I      LK+ DFGLAR   I  + ++H+      +VT WYR+P +LL   +Y+  +D+W+ GCI AEM+
Sbjct:   16 LGGRFIDFQPLGFGVNGLVLSATDSRACRKVAVKKIVLS--DARSMKHALREIKIIRRLDHDNIVKVYEVLGPKGSDLQGELFKFSVAYIVQEYMETDLACLLEQGTLTEDHAKL---FMYQLLRGLKYIHSANVLHRDLKPANIFISTEDLVLKIGDFGLAR---IVDQHYSHKGYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCILAEML 223          
BLAST of FC929471 vs. ExPASy Swiss-Prot
Match: SLT2_YEAST (Mitogen-activated protein kinase SLT2/MPK1 OS=Saccharomyces cerevisiae GN=SLT2 PE=1 SV=2)

HSP 1 Score: 123.25 bits (308), Expect = 1.672e-27
Identity = 81/213 (38.03%), Postives = 117/213 (54.93%), Query Frame = 1
Query:  211 SVGSKYEKVEKIGEGTYGVVYKAR--NCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQ-HGNIVRLQDVV------HSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGI-PVRT---FTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMV 810
            SV  +++ +++IG G YG+V  AR      + T+A+KK+        +   ++RE+ LL+  + H NI  L D+        S   LYL  E ++ D+ + + S     +     ++F YQIL G+ Y HS  VLHRDLKP NLL++     LK+ DFGLAR +   PV      T  V T WYRAPEI+L  + Y+  +DVWS GCI AE +
Sbjct:   18 SVDKRFQLIKEIGHGAYGIVCSARFAEAAEDTTVAIKKVTNVFSKTLLCKRSLRELKLLRHFRGHKNITCLYDMDIVFYPDGSINGLYLYEELMECDMHQIIKSGQPLTDAH--YQSFTYQILCGLKYIHSADVLHRDLKPGNLLVNADCQ-LKICDFGLARGYSENPVENSQFLTEYVATRWYRAPEIMLSYQGYTKAIDVWSAGCILAEFL 227          
BLAST of FC929471 vs. ExPASy Swiss-Prot
Match: MK08_RAT (Mitogen-activated protein kinase 8 OS=Rattus norvegicus GN=Mapk8 PE=1 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 1.672e-27
Identity = 76/206 (36.89%), Postives = 115/206 (55.83%), Query Frame = 1
Query:  211 SVGSKYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKKL------YLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMV 810
            +V  +Y+ ++ IG G  G+V  A + +    +A+KK+    +++     A RE+ L+K + H NI+ L +V   +K L      Y+V E +D +L + +        D   +   LYQ+L GI + HS  ++HRDLKP N+++ +    LK+ DFGLAR  G      T  VVT +YRAPE++LG   Y   VD+WSVGCI  EMV
Sbjct:   21 TVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVI----QMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV-KSDCTLKILDFGLARTAGTSF-MMTPYVVTRYYRAPEVILG-MGYKENVDLWSVGCIMGEMV 219          
BLAST of FC929471 vs. ExPASy Swiss-Prot
Match: MK08_MOUSE (Mitogen-activated protein kinase 8 OS=Mus musculus GN=Mapk8 PE=1 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 1.672e-27
Identity = 76/206 (36.89%), Postives = 115/206 (55.83%), Query Frame = 1
Query:  211 SVGSKYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKKL------YLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMV 810
            +V  +Y+ ++ IG G  G+V  A + +    +A+KK+    +++     A RE+ L+K + H NI+ L +V   +K L      Y+V E +D +L + +        D   +   LYQ+L GI + HS  ++HRDLKP N+++ +    LK+ DFGLAR  G      T  VVT +YRAPE++LG   Y   VD+WSVGCI  EMV
Sbjct:   21 TVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVI----QMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV-KSDCTLKILDFGLARTAGTSF-MMTPYVVTRYYRAPEVILG-MGYKENVDLWSVGCIMGEMV 219          
BLAST of FC929471 vs. ExPASy Swiss-Prot
Match: MK08_HUMAN (Mitogen-activated protein kinase 8 OS=Homo sapiens GN=MAPK8 PE=1 SV=2)

HSP 1 Score: 123.25 bits (308), Expect = 1.672e-27
Identity = 76/206 (36.89%), Postives = 115/206 (55.83%), Query Frame = 1
Query:  211 SVGSKYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKKL------YLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMV 810
            +V  +Y+ ++ IG G  G+V  A + +    +A+KK+    +++     A RE+ L+K + H NI+ L +V   +K L      Y+V E +D +L + +        D   +   LYQ+L GI + HS  ++HRDLKP N+++ +    LK+ DFGLAR  G      T  VVT +YRAPE++LG   Y   VD+WSVGCI  EMV
Sbjct:   21 TVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVI----QMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV-KSDCTLKILDFGLARTAGTSF-MMTPYVVTRYYRAPEVILG-MGYKENVDLWSVGCIMGEMV 219          
BLAST of FC929471 vs. ExPASy Swiss-Prot
Match: MK08_DANRE (Mitogen-activated protein kinase 8 OS=Danio rerio GN=mapk8 PE=2 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 1.672e-27
Identity = 77/206 (37.38%), Postives = 116/206 (56.31%), Query Frame = 1
Query:  211 SVGSKYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKKL------YLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMV 810
            +V  +Y+ +  IG G  G+V  A + V +  +A+KK+    +++     A RE+ L+K + H NI+ L +V   +K L      YLV E +D +L + +        D   +   LYQ+L GI + H+  ++HRDLKP N+++ +    LK+ DFGLAR     +   T  VVT +YRAPE++LG   Y   VDVWS+GCI AEMV
Sbjct:   21 TVLKRYQNLRPIGSGAQGIVCSAYDHVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKTLEEFQDVYLVMELMDANLCQVI----QMELDHERLSYLLYQMLCGIKHLHAAGIIHRDLKPSNIVV-KSDCTLKILDFGLARTAATGL-LMTPYVVTRYYRAPEVILG-MGYQANVDVWSIGCIMAEMV 219          
BLAST of FC929471 vs. ExPASy Swiss-Prot
Match: GSK3_CAEEL (Glycogen synthase kinase-3 OS=Caenorhabditis elegans GN=gsk-3 PE=1 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 1.672e-27
Identity = 72/208 (34.62%), Postives = 118/208 (56.73%), Query Frame = 1
Query:  226 YEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHS--EKK----LYLVFEYLDLDL-------KKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMV 810
            Y   + IG G++GVV+ A+   TNE +A+KK+  ++  +       RE+ +++++ H NIV+L+   +S  EKK    L L+ EY+   +        K     P        +K ++YQ+LR +AY HS  + HRD+KPQNLLID  +  LKL DFG A+ + +        + + +YRAPE++ G+ +Y+  +DVWS G + AE++
Sbjct:   36 YYDQKVIGNGSFGVVFLAKLSTTNEMVAIKKVLQDKRFKN------RELQIMRKLNHPNIVKLKYFFYSSGEKKDELYLNLILEYVPETVYRVARHYSKQRQQIPMI-----YVKLYMYQLLRSLAYIHSIGICHRDIKPQNLLIDPESGVLKLCDFGSAK-YLVRNEPNVSYICSRYYRAPELIFGATNYTNSIDVWSAGTVMAELL 231          
BLAST of FC929471 vs. ExPASy Swiss-Prot
Match: CDC2H_CRIFA (Cell division control protein 2 homolog OS=Crithidia fasciculata GN=CRK PE=3 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 1.672e-27
Identity = 59/137 (43.07%), Postives = 87/137 (63.50%), Query Frame = 1
Query:  223 KYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRL-IKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRR 630
            +Y  V K+GEGTYG+VYK     T   +A K++ +  +DEG+P  AIREI LLKE++H N+V L +V+    K+ ++FE  D DLK++M+S P    D    ++  L QI  G+ Y H   V+HRD+KPQN+ ++ R
Sbjct:    6 RYRHVVKLGEGTYGMVYKGTEIQTGRVVAFKRMVVTSDDEGIPGAAIREICLLKELRHNNVVELFEVLFDPPKITMIFELCDCDLKRYMESRPQRLLDANTEMRPILKQIFLGLEYLHGRCVVHRDMKPQNIFVNVR 142          

HSP 2 Score: 80.1073 bits (196), Expect = 1.623e-14
Identity = 34/56 (60.71%), Postives = 45/56 (80.36%), Query Frame = 1
Query:  640 LKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEM 807
            +K+ DFGLAR   IPV+ ++HEVVTLWYR+P++L+ S  YS PVD+WS+G IF EM
Sbjct:  211 IKIGDFGLARVEEIPVKKYSHEVVTLWYRSPDVLMSSALYSYPVDIWSMGAIFFEM 266          
BLAST of FC929471 vs. ExPASy Swiss-Prot
Match: SPM1_SCHPO (Mitogen-activated protein kinase spm1 OS=Schizosaccharomyces pombe GN=spm1 PE=1 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 2.184e-27
Identity = 79/210 (37.62%), Postives = 115/210 (54.76%), Query Frame = 1
Query:  214 VGSKYEKVEKIGEGTYGVVYKARNCVTN--ETIALKKIRLEQEDEGVPSTAIREISLLKEMQ-HGNIVRLQDV----VHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRT----FTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMV 810
            V   ++ V+++G+G YG+V  ARN  +   E +A+KKI        +   A+REI LL   + H NI  + D+     ++  ++Y+  E ++ DL   + S     +     ++F+YQIL G+ Y HS  V+HRDLKP NLL++     LK+ DFGLAR             T  V T WYRAPEI+L    Y   +DVWSVGCI AE++
Sbjct:   17 VEPNFKVVKELGQGAYGIVCAARNVASKDQEAVAIKKITNVFSKSILTKRALREIKLLIHFRNHRNITCIYDLDIINPYNFNEVYIYEELMEADLNAIIKSGQPLTDAH--FQSFIYQILCGLKYIHSANVIHRDLKPGNLLVNADCE-LKICDFGLARGCSENPEENPGFMTEYVATRWYRAPEIMLSFSSYHKGIDVWSVGCILAELL 223          
The following BLAST results are available for this feature:
BLAST of FC929471 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
MK08A_CYPCA1.280e-2737.86Mitogen-activated protein kinase 8A OS=Cyprinus ca... [more]
MK04_MOUSE1.280e-2734.26Mitogen-activated protein kinase 4 OS=Mus musculus... [more]
SLT2_YEAST1.672e-2738.03Mitogen-activated protein kinase SLT2/MPK1 OS=Sacc... [more]
MK08_RAT1.672e-2736.89Mitogen-activated protein kinase 8 OS=Rattus norve... [more]
MK08_MOUSE1.672e-2736.89Mitogen-activated protein kinase 8 OS=Mus musculus... [more]
MK08_HUMAN1.672e-2736.89Mitogen-activated protein kinase 8 OS=Homo sapiens... [more]
MK08_DANRE1.672e-2737.38Mitogen-activated protein kinase 8 OS=Danio rerio ... [more]
GSK3_CAEEL1.672e-2734.62Glycogen synthase kinase-3 OS=Caenorhabditis elega... [more]
CDC2H_CRIFA1.672e-2743.07Cell division control protein 2 homolog OS=Crithid... [more]
SPM1_SCHPO2.184e-2737.62Mitogen-activated protein kinase spm1 OS=Schizosac... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAH2CE06RM1 PhII-IIIV1 Citrus clementina cDNA clone KN0AAH2CE06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929471 ID=FC929471; Name=FC929471; organism=Citrus clementina; type=EST; length=815bp
GGCACGAGGCTAAAACTCACTTCTTTCACCGCCGCCGCTGCCTCCAATCA
CCTCACTCTTACTCCGGCGATCTCCCCCGTCGGCTTGGATCGTCCTCGCG
TCTGTTACTGTATTATGCATTTGTATTTTTCTCTTTCGTAAGCGGTTAAT
TTTTTCTTCATAACACACTGCCGCCACCTACGCCGTCGATTCGTGCCGTT
CTTGTCGCCGTCCGTCGGTAGCAAGTATGAAAAGGTTGAGAAGATTGGTG
AAGGAACCTATGGAGTAGTTTACAAGGCCCGTAATTGTGTCACGAATGAG
ACAATAGCATTGAAGAAGATCCGCCTTGAGCAGGAAGATGAAGGTGTGCC
TAGCACCGCAATTAGAGAAATTTCCCTCTTGAAAGAAATGCAGCATGGGA
ACATTGTTAGGTTGCAAGATGTAGTGCATAGCGAGAAGAAACTTTATCTG
GTTTTCGAGTATTTGGACTTGGATTTGAAGAAGCACATGGATTCTTGCCC
AGATTTTGCTAATGATCCTCGTCTGATAAAAACATTCCTTTATCAAATTC
TACGTGGCATTGCCTACTGCCATTCTCACCGGGTTCTTCATCGAGATTTG
AAACCACAAAATTTGCTAATAGATCGTCGTACGAATGCACTAAAGCTTGC
AGATTTTGGACTGGCCAGGGCTTTTGGTATTCCTGTTAGGACATTTACAC
ATGAGGTGGTGACATTGTGGTACAGAGCACCTGAAATATTACTAGGATCT
CGCCATTACTCTACTCCAGTTGATGTGTGGTCGGTGGGATGTATATTTGC
TGAGATGGTGAACCA
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