FC929471

Overview
NameFC929471
Unique NameFC929471
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length815
Libraries
Library NameType
PhII-IIIV1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC929471 vs. ExPASy Swiss-Prot
Match: MK08_XENLA (Mitogen-activated protein kinase 8 OS=Xenopus laevis GN=mapk8 PE=2 SV=2)

HSP 1 Score: 122.865 bits (307), Expect = 2.184e-27
Identity = 76/206 (36.89%), Postives = 115/206 (55.83%), Query Frame = 1
Query:  211 SVGSKYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKK------LYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMV 810
            +V  +Y+ ++ IG G  G+V  A + V    +A+KK+    +++     A RE+ L+K + H NI+ L +V   +K       LY+V E +D +L + +        D   +   LYQ+L GI + HS  ++HRDLKP N+++ +    LK+ DFGLAR  G      T  VVT +YRAPE++LG   Y   VD+WSVGCI  EM+
Sbjct:   21 TVLKRYQNLKPIGSGAQGIVCAAFDAVLERHVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDLYIVMELMDANLCQVI----QMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV-KSDCTLKILDFGLARTAGTSF-MMTPYVVTRYYRAPEVILG-MGYKENVDIWSVGCILGEMI 219          
BLAST of FC929471 vs. ExPASy Swiss-Prot
Match: JNK_DROME (Stress-activated protein kinase JNK OS=Drosophila melanogaster GN=bsk PE=1 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 2.184e-27
Identity = 76/206 (36.89%), Postives = 116/206 (56.31%), Query Frame = 1
Query:  211 SVGSKYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKKL------YLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMV 810
            ++ S+Y  +  IG G  G+V  A + +T + +A+KK+    ++      A RE  L+K + H NI+ L +    ++ L      YLV E +D +L + +    D  +D   +   LYQ+L GI + HS  ++HRDLKP N+++ +    LK+ DFGLAR  G      T  VVT +YRAPE++LG   Y+  VD+WSVGCI  EM+
Sbjct:   19 TIHSRYINLRPIGSGAQGIVCAAYDTITQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNIIGLLNAFTPQRNLEEFQDVYLVMELMDANLCQVIQM--DLDHD--RMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV-KADCTLKILDFGLARTAGTTF-MMTPYVVTRYYRAPEVILG-MGYTENVDIWSVGCIMGEMI 217          
BLAST of FC929471 vs. ExPASy Swiss-Prot
Match: MK11_HUMAN (Mitogen-activated protein kinase 11 OS=Homo sapiens GN=MAPK11 PE=1 SV=2)

HSP 1 Score: 122.479 bits (306), Expect = 2.852e-27
Identity = 71/205 (34.63%), Postives = 112/205 (54.63%), Query Frame = 1
Query:  214 VGSKYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDV------VHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMV 810
            V  + + +  +G G YG V  A +    + +A+KK+    +         RE+ LLK ++H N++ L DV      +    ++YLV   +  DL  ++  C   +++   ++  +YQ+LRG+ Y HS  ++HRDLKP N+ ++     L++ DFGLAR         T  V T WYRAPEI+L   HY+  VD+WSVGCI AE++
Sbjct:   20 VPQRLQGLRPVGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLMGADLN-NIVKCQALSDEH--VQFLVYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDCE-LRILDFGLARQAD---EEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 217          
BLAST of FC929471 vs. ExPASy Swiss-Prot
Match: GSK3H_DROME (Putative glycogen synthase kinase-3 homolog OS=Drosophila melanogaster GN=gskt PE=2 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 3.725e-27
Identity = 67/203 (33.00%), Postives = 114/203 (56.16%), Query Frame = 1
Query:  226 YEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHS------EKKLYLVFEYLDLDLKK--HMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMV 810
            Y   + +G G++GVV++A+   +NE +A+KK+  ++  +       RE+ ++++++H NI+ L+    S      E  L LV E+L   L K     +          ++ ++YQ+LR + Y HS    HRD+KPQN+L+D  T  LKL DFG A+   I        + + +YRAPE++ GS  Y+T +D+WS GC+ +E++
Sbjct:   33 YTDAKVVGNGSFGVVFQAKMVPSNEMVAIKKVLQDRRFKN------RELQIMRKLRHDNIITLKWFFFSSGEKRDEVYLNLVMEFLPETLYKVERQYARAKQTLPVNFVRLYMYQLLRSMGYLHSLGFCHRDIKPQNMLLDSETGVLKLCDFGSAKQL-ISGEPNVSYICSRYYRAPELIFGSTDYTTKIDMWSAGCVMSELL 228          
BLAST of FC929471 vs. ExPASy Swiss-Prot
Match: MK09_CHICK (Mitogen-activated protein kinase 9 OS=Gallus gallus GN=MAPK9 PE=2 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 6.354e-27
Identity = 79/208 (37.98%), Postives = 117/208 (56.25%), Query Frame = 1
Query:  211 SVGSKYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKKL------YLVFEYLDLDLKK--HMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMV 810
            +V  +Y++++ IG G  G+V  A + V    +A+KK+    +++     A RE+ LLK + H NI+ L +V   +K L      YLV E +D +L +  HM+       D   +   LYQ+L GI + HS  ++HRDLKP N+++ +    LK+ DFGLAR         T  VVT +YRAPE++LG   Y   VD+WSVGCI  E+V
Sbjct:   21 TVLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLEEFQDVYLVMELMDANLCQVIHMEL------DHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV-KSDCTLKILDFGLART-ACTNFMMTPYVVTRYYRAPEVILG-MGYKENVDIWSVGCIMGELV 219          
BLAST of FC929471 vs. ExPASy Swiss-Prot
Match: CSK23_ARATH (Probable casein kinase II subunit alpha OS=Arabidopsis thaliana GN=At2g23080 PE=2 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 6.354e-27
Identity = 68/199 (34.17%), Postives = 119/199 (59.80%), Query Frame = 1
Query:  226 YEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHG-NIVRLQDVVHSE--KKLYLVFEYLD-LDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMV 810
            YE V K+G G Y  V++ +N  TNE   +K ++  ++ +       REI +L+ +  G NIV+L D+V  E  K   LVFE+++ +D K    +  D+      I+ ++Y++L+ + +CHS  ++HRD+KP N++ID +   L+L D+GLA  F  P + +   V + +++ PE+L+  + Y   +D+WS+GC+FA M+
Sbjct:   34 YEVVRKVGRGKYSEVFEGKNVNTNERCVIKILKPVKKKK-----IKREIKILQNLCGGPNIVKLYDIVRDEHSKTPSLVFEFVNSVDFKVLYPTLTDYD-----IRYYIYELLKALDFCHSQGIMHRDVKPHNVMIDHQLRKLRLIDWGLAE-FYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMI 221          
BLAST of FC929471 vs. ExPASy Swiss-Prot
Match: SNRK_RAT (SNF-related serine/threonine-protein kinase OS=Rattus norvegicus GN=Snrk PE=1 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 8.298e-27
Identity = 71/200 (35.50%), Postives = 111/200 (55.50%), Query Frame = 1
Query:  214 VGSKYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKKLYLVFEYLD-LDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMV 810
            +   Y+  + +G G + VV  AR+  T E +A+K I   + D        +E+  +K +QH NIVRL +V+ ++ KLYL+ E  D  D+  ++    +  N+  L K +  QI+  I+YCH   V+HRDLKP+N++   +   +KL DFG +  F  P +  T    +L Y APEILLG  + +  VD+WS+G I   +V
Sbjct:   12 IAGLYDLDKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTLATGHLFQEVRCMKLVQHPNIVRLYEVIDTQTKLYLILELGDGGDMFDYIMKHEEGLNED-LAKKYFAQIVHAISYCHKLHVVHRDLKPENVVFFEKQGLVKLTDFGFSNKFQ-PGKKLTTSCGSLAYSAPEILLGDEYDAPAVDIWSLGVILFMLV 209          
BLAST of FC929471 vs. ExPASy Swiss-Prot
Match: SNRK_MOUSE (SNF-related serine/threonine-protein kinase OS=Mus musculus GN=Snrk PE=1 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 8.298e-27
Identity = 71/200 (35.50%), Postives = 111/200 (55.50%), Query Frame = 1
Query:  214 VGSKYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKKLYLVFEYLD-LDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMV 810
            +   Y+  + +G G + VV  AR+  T E +A+K I   + D        +E+  +K +QH NIVRL +V+ ++ KLYL+ E  D  D+  ++    +  N+  L K +  QI+  I+YCH   V+HRDLKP+N++   +   +KL DFG +  F  P +  T    +L Y APEILLG  + +  VD+WS+G I   +V
Sbjct:   12 IAGLYDLDKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTLATGHLFQEVRCMKLVQHPNIVRLYEVIDTQTKLYLILELGDGGDMFDYIMKHEEGLNED-LAKKYFAQIVHAISYCHKLHVVHRDLKPENVVFFEKQGLVKLTDFGFSNKFQ-PGKKLTTSCGSLAYSAPEILLGDEYDAPAVDIWSLGVILFMLV 209          
BLAST of FC929471 vs. ExPASy Swiss-Prot
Match: SNRK_HUMAN (SNF-related serine/threonine-protein kinase OS=Homo sapiens GN=SNRK PE=1 SV=2)

HSP 1 Score: 120.939 bits (302), Expect = 8.298e-27
Identity = 71/200 (35.50%), Postives = 111/200 (55.50%), Query Frame = 1
Query:  214 VGSKYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKKLYLVFEYLD-LDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMV 810
            +   Y+  + +G G + VV  AR+  T E +A+K I   + D        +E+  +K +QH NIVRL +V+ ++ KLYL+ E  D  D+  ++    +  N+  L K +  QI+  I+YCH   V+HRDLKP+N++   +   +KL DFG +  F  P +  T    +L Y APEILLG  + +  VD+WS+G I   +V
Sbjct:   12 IAGLYDLDKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTLATGHLFQEVRCMKLVQHPNIVRLYEVIDTQTKLYLILELGDGGDMFDYIMKHEEGLNED-LAKKYFAQIVHAISYCHKLHVVHRDLKPENVVFFEKQGLVKLTDFGFSNKFQ-PGKKLTTSCGSLAYSAPEILLGDEYDAPAVDIWSLGVILFMLV 209          
BLAST of FC929471 vs. ExPASy Swiss-Prot
Match: MK09_RAT (Mitogen-activated protein kinase 9 OS=Rattus norvegicus GN=Mapk9 PE=1 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 8.298e-27
Identity = 79/208 (37.98%), Postives = 117/208 (56.25%), Query Frame = 1
Query:  211 SVGSKYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKKL------YLVFEYLDLDLKK--HMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMV 810
            +V  +Y++++ IG G  G+V  A + V    +A+KK+    +++     A RE+ LLK + H NI+ L +V   +K L      YLV E +D +L +  HM+       D   +   LYQ+L GI + HS  ++HRDLKP N+++ +    LK+ DFGLAR         T  VVT +YRAPE++LG   Y   VD+WSVGCI  E+V
Sbjct:   21 TVLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIHMEL------DHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV-KSDCTLKILDFGLART-ACTNFMMTPYVVTRYYRAPEVILG-MGYKENVDIWSVGCIMGELV 219          
The following BLAST results are available for this feature:
BLAST of FC929471 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
MK08_XENLA2.184e-2736.89Mitogen-activated protein kinase 8 OS=Xenopus laev... [more]
JNK_DROME2.184e-2736.89Stress-activated protein kinase JNK OS=Drosophila ... [more]
MK11_HUMAN2.852e-2734.63Mitogen-activated protein kinase 11 OS=Homo sapien... [more]
GSK3H_DROME3.725e-2733.00Putative glycogen synthase kinase-3 homolog OS=Dro... [more]
MK09_CHICK6.354e-2737.98Mitogen-activated protein kinase 9 OS=Gallus gallu... [more]
CSK23_ARATH6.354e-2734.17Probable casein kinase II subunit alpha OS=Arabido... [more]
SNRK_RAT8.298e-2735.50SNF-related serine/threonine-protein kinase OS=Rat... [more]
SNRK_MOUSE8.298e-2735.50SNF-related serine/threonine-protein kinase OS=Mus... [more]
SNRK_HUMAN8.298e-2735.50SNF-related serine/threonine-protein kinase OS=Hom... [more]
MK09_RAT8.298e-2737.98Mitogen-activated protein kinase 9 OS=Rattus norve... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAH2CE06RM1 PhII-IIIV1 Citrus clementina cDNA clone KN0AAH2CE06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929471 ID=FC929471; Name=FC929471; organism=Citrus clementina; type=EST; length=815bp
GGCACGAGGCTAAAACTCACTTCTTTCACCGCCGCCGCTGCCTCCAATCA
CCTCACTCTTACTCCGGCGATCTCCCCCGTCGGCTTGGATCGTCCTCGCG
TCTGTTACTGTATTATGCATTTGTATTTTTCTCTTTCGTAAGCGGTTAAT
TTTTTCTTCATAACACACTGCCGCCACCTACGCCGTCGATTCGTGCCGTT
CTTGTCGCCGTCCGTCGGTAGCAAGTATGAAAAGGTTGAGAAGATTGGTG
AAGGAACCTATGGAGTAGTTTACAAGGCCCGTAATTGTGTCACGAATGAG
ACAATAGCATTGAAGAAGATCCGCCTTGAGCAGGAAGATGAAGGTGTGCC
TAGCACCGCAATTAGAGAAATTTCCCTCTTGAAAGAAATGCAGCATGGGA
ACATTGTTAGGTTGCAAGATGTAGTGCATAGCGAGAAGAAACTTTATCTG
GTTTTCGAGTATTTGGACTTGGATTTGAAGAAGCACATGGATTCTTGCCC
AGATTTTGCTAATGATCCTCGTCTGATAAAAACATTCCTTTATCAAATTC
TACGTGGCATTGCCTACTGCCATTCTCACCGGGTTCTTCATCGAGATTTG
AAACCACAAAATTTGCTAATAGATCGTCGTACGAATGCACTAAAGCTTGC
AGATTTTGGACTGGCCAGGGCTTTTGGTATTCCTGTTAGGACATTTACAC
ATGAGGTGGTGACATTGTGGTACAGAGCACCTGAAATATTACTAGGATCT
CGCCATTACTCTACTCCAGTTGATGTGTGGTCGGTGGGATGTATATTTGC
TGAGATGGTGAACCA
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