FC929471

Overview
NameFC929471
Unique NameFC929471
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length815
Libraries
Library NameType
PhII-IIIV1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC929471 vs. ExPASy Swiss-Prot
Match: MK09_HUMAN (Mitogen-activated protein kinase 9 OS=Homo sapiens GN=MAPK9 PE=1 SV=2)

HSP 1 Score: 120.939 bits (302), Expect = 8.298e-27
Identity = 79/208 (37.98%), Postives = 117/208 (56.25%), Query Frame = 1
Query:  211 SVGSKYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKKL------YLVFEYLDLDLKK--HMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMV 810
            +V  +Y++++ IG G  G+V  A + V    +A+KK+    +++     A RE+ LLK + H NI+ L +V   +K L      YLV E +D +L +  HM+       D   +   LYQ+L GI + HS  ++HRDLKP N+++ +    LK+ DFGLAR         T  VVT +YRAPE++LG   Y   VD+WSVGCI  E+V
Sbjct:   21 TVLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIHMEL------DHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV-KSDCTLKILDFGLART-ACTNFMMTPYVVTRYYRAPEVILG-MGYKENVDIWSVGCIMGELV 219          
BLAST of FC929471 vs. ExPASy Swiss-Prot
Match: STK36_PONAB (Serine/threonine-protein kinase 36 OS=Pongo abelii GN=STK36 PE=2 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 1.084e-26
Identity = 69/195 (35.38%), Postives = 107/195 (54.87%), Query Frame = 1
Query:  223 KYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEM 807
            KY  +E IGEG++G VYK R   + + +ALK I      E       REI +++ ++H NIV + D   ++K++ +V +Y + +L + ++       D   ++    Q++  + Y HSHR+LHRD+KPQN+L+  +   +KL DFG ARA        T    T  Y +PE L+  R Y    D+WSVGCI  E+
Sbjct:    3 KYHVLEMIGEGSFGRVYKGRRKYSAQVVALKFIPKLGRSEKELRNLQREIEIMRGLRHPNIVHMLDSFETDKEVVVVTDYAEGELLQILEDDGKLPEDQ--VQAIAAQLVSALYYLHSHRILHRDMKPQNILL-AKGGGIKLCDFGFARAMSTNTMVLTSIKGTPLYMSPE-LVEERPYDHTADLWSVGCILYEL 193          
BLAST of FC929471 vs. ExPASy Swiss-Prot
Match: STK36_HUMAN (Serine/threonine-protein kinase 36 OS=Homo sapiens GN=STK36 PE=1 SV=2)

HSP 1 Score: 120.168 bits (300), Expect = 1.415e-26
Identity = 69/195 (35.38%), Postives = 107/195 (54.87%), Query Frame = 1
Query:  223 KYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEM 807
            KY  +E IGEG++G VYK R   + + +ALK I      E       REI +++ ++H NIV + D   ++K++ +V +Y + +L + ++       D   ++    Q++  + Y HSHR+LHRD+KPQN+L+  +   +KL DFG ARA        T    T  Y +PE L+  R Y    D+WSVGCI  E+
Sbjct:    3 KYHVLEMIGEGSFGRVYKGRRKYSAQVVALKFIPKLGRSEKELRNLQREIEIMRGLRHPNIVHMLDSFETDKEVVVVTDYAEGELFQILEDDGKLPEDQ--VQAIAAQLVSALYYLHSHRILHRDMKPQNILL-AKGGGIKLCDFGFARAMSTNTMVLTSIKGTPLYMSPE-LVEERPYDHTADLWSVGCILYEL 193          
BLAST of FC929471 vs. ExPASy Swiss-Prot
Match: SMK1_YEAST (Sporulation-specific mitogen-activated protein kinase SMK1 OS=Saccharomyces cerevisiae GN=SMK1 PE=1 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 1.415e-26
Identity = 90/217 (41.47%), Postives = 116/217 (53.46%), Query Frame = 1
Query:  211 SVGSKYEKVEKIGEGTYGVV----YKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQ-HGNIVRLQD--VVHSEKK--LYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTF----------THEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAE 804
            S+   YE ++ +G+G YG V    +K R+      IA+KKI      E +   AIRE+  +   + H NIV L D  +V S     LY   E +D DL K + S    +     IK FLYQIL G+ Y HS  V+HRDLKP N+L       LK+ DFGLAR  GI    F          T+ V T WYRAPE+LL ++ YS  VD+W+VGCI AE
Sbjct:   33 SIPGYYEIIQFLGKGAYGTVCSVKFKGRSPAAR--IAVKKISNIFNKEILLKRAIRELKFMNFFKGHKNIVNLIDLEIVTSSPYDGLYCYQELIDYDLAKVIHSSVQLSEFH--IKYFLYQILCGLKYIHSADVIHRDLKPGNILCTLN-GCLKICDFGLAR--GIHAGFFKCHSTVQPHITNYVATRWYRAPELLLSNQPYSKSVDIWAVGCILAE 242          
BLAST of FC929471 vs. ExPASy Swiss-Prot
Match: CSK22_MOUSE (Casein kinase II subunit alpha' OS=Mus musculus GN=Csnk2a2 PE=2 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 1.415e-26
Identity = 69/207 (33.33%), Postives = 121/207 (58.45%), Query Frame = 1
Query:  208 PSVGSK--YEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHG-NIVRLQDVVHS--EKKLYLVFEYLD-LDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMV 810
            PS G++  Y+ V K+G G Y  V++A N   NE + +K ++  ++ +       RE+ +L+ ++ G NI++L D V     K   LVFEY++  D K+      DF      I+ ++Y++L+ + YCHS  ++HRD+KP N++ID +   L+L D+GLA  F  P + +   V + +++ PE+L+  + Y   +D+WS+GC+ A M+
Sbjct:   32 PSWGNQDDYQLVRKLGRGKYSEVFEAINITNNERVVVKILKPVKKKK-----IKREVKILENLRGGTNIIKLIDTVKDPVSKTPALVFEYINNTDFKQLYQILTDFD-----IRFYMYELLKALDYCHSKGIMHRDVKPHNVMIDHQQKKLRLIDWGLAE-FYHPAQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMI 227          
BLAST of FC929471 vs. ExPASy Swiss-Prot
Match: CSK22_HUMAN (Casein kinase II subunit alpha' OS=Homo sapiens GN=CSNK2A2 PE=1 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 1.415e-26
Identity = 69/207 (33.33%), Postives = 121/207 (58.45%), Query Frame = 1
Query:  208 PSVGSK--YEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHG-NIVRLQDVVHS--EKKLYLVFEYLD-LDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMV 810
            PS G++  Y+ V K+G G Y  V++A N   NE + +K ++  ++ +       RE+ +L+ ++ G NI++L D V     K   LVFEY++  D K+      DF      I+ ++Y++L+ + YCHS  ++HRD+KP N++ID +   L+L D+GLA  F  P + +   V + +++ PE+L+  + Y   +D+WS+GC+ A M+
Sbjct:   32 PSWGNQDDYQLVRKLGRGKYSEVFEAINITNNERVVVKILKPVKKKK-----IKREVKILENLRGGTNIIKLIDTVKDPVSKTPALVFEYINNTDFKQLYQILTDFD-----IRFYMYELLKALDYCHSKGIMHRDVKPHNVMIDHQQKKLRLIDWGLAE-FYHPAQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMI 227          
BLAST of FC929471 vs. ExPASy Swiss-Prot
Match: CSK22_BOVIN (Casein kinase II subunit alpha' OS=Bos taurus GN=CSNK2A2 PE=1 SV=3)

HSP 1 Score: 120.168 bits (300), Expect = 1.415e-26
Identity = 69/207 (33.33%), Postives = 121/207 (58.45%), Query Frame = 1
Query:  208 PSVGSK--YEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHG-NIVRLQDVVHS--EKKLYLVFEYLD-LDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMV 810
            PS G++  Y+ V K+G G Y  V++A N   NE + +K ++  ++ +       RE+ +L+ ++ G NI++L D V     K   LVFEY++  D K+      DF      I+ ++Y++L+ + YCHS  ++HRD+KP N++ID +   L+L D+GLA  F  P + +   V + +++ PE+L+  + Y   +D+WS+GC+ A M+
Sbjct:   32 PSWGNQDDYQLVRKLGRGKYSEVFEAINITNNERVVVKILKPVKKKK-----IKREVKILENLRGGTNIIKLIDTVKDPVSKTPALVFEYINNTDFKQLYQILTDFD-----IRFYMYELLKALDYCHSKGIMHRDVKPHNVMIDHQQKKLRLIDWGLAE-FYHPAQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMI 227          
BLAST of FC929471 vs. ExPASy Swiss-Prot
Match: MK11_MOUSE (Mitogen-activated protein kinase 11 OS=Mus musculus GN=Mapk11 PE=1 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 1.849e-26
Identity = 70/205 (34.15%), Postives = 111/205 (54.15%), Query Frame = 1
Query:  214 VGSKYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDV------VHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMV 810
            V  + + +  +G G YG V  A +    + +A+KK+    +         RE+ LLK ++H N++ L DV      +    ++YLV   +  DL  ++  C   +++   ++  +YQ+LRG+ Y HS  ++HRDLKP N+ ++     L++ DFGLA          T  V T WYRAPEI+L   HY+  VD+WSVGCI AE++
Sbjct:   20 VPQRLQGLRPVGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLMGADLN-NIVKCQALSDEH--VQFLVYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDCE-LRILDFGLAPQAD---EEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 217          
BLAST of FC929471 vs. ExPASy Swiss-Prot
Match: MK08B_CYPCA (Mitogen-activated protein kinase 8B OS=Cyprinus carpio GN=mapk8b PE=2 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 1.849e-26
Identity = 77/206 (37.38%), Postives = 113/206 (54.85%), Query Frame = 1
Query:  211 SVGSKYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKKL------YLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMV 810
            +V  +Y+ +  IG G  G+V  A +      +A+KK+    +++     A RE+ L+K + H NI+ L +V   +K L      YLV E +D +L + +        D   +   LYQ+L G  + HS  ++HRDLKP N+++ +    LK+ DFGLAR     +   T  VVT +YRAPE++LG   Y   VDVWSVGCI AEMV
Sbjct:   21 TVLKRYQNLRPIGSGAQGIVCSAYDHNLERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKTLEEFQDVYLVMELMDANLCQVI----QMELDHERLSYLLYQMLCGTKHLHSAGIIHRDLKPSNIVV-KSDCTLKILDFGLARTAATGL-LMTPYVVTRYYRAPEVILG-MGYQANVDVWSVGCIMAEMV 219          
BLAST of FC929471 vs. ExPASy Swiss-Prot
Match: PMK1_CAEEL (Mitogen-activated protein kinase pmk-1 OS=Caenorhabditis elegans GN=pmk-1 PE=1 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 2.414e-26
Identity = 79/205 (38.54%), Postives = 107/205 (52.20%), Query Frame = 1
Query:  214 VGSKYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDV------VHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMV 810
            V + Y  +  IG G YG V  A    +   +A+KK     +         RE+ LL+ M H NI+ L DV      V+  + +Y V   +  DL   +       ND   I+  +YQILRG+ Y HS  ++HRDLKP N+ ++     LK+ DFGLAR     +   T  V T WYRAPEI+L   HY+  VDVWSVGCI AE++
Sbjct:   31 VPNYYINLTPIGTGAYGTVCAAECTRSGTRVAIKKFNRPFQSIIHARRTYRELRLLRCMCHENIIDLLDVFTPNENVNDIEDVYFVSMLMGADLSNILKI--QRLNDDH-IQFLVYQILRGLKYIHSADIIHRDLKPSNIAVNEDCE-LKILDFGLARQTDSEM---TGYVATRWYRAPEIMLNWMHYTQTVDVWSVGCILAELI 228          
The following BLAST results are available for this feature:
BLAST of FC929471 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
MK09_HUMAN8.298e-2737.98Mitogen-activated protein kinase 9 OS=Homo sapiens... [more]
STK36_PONAB1.084e-2635.38Serine/threonine-protein kinase 36 OS=Pongo abelii... [more]
STK36_HUMAN1.415e-2635.38Serine/threonine-protein kinase 36 OS=Homo sapiens... [more]
SMK1_YEAST1.415e-2641.47Sporulation-specific mitogen-activated protein kin... [more]
CSK22_MOUSE1.415e-2633.33Casein kinase II subunit alpha' OS=Mus musculus GN... [more]
CSK22_HUMAN1.415e-2633.33Casein kinase II subunit alpha' OS=Homo sapiens GN... [more]
CSK22_BOVIN1.415e-2633.33Casein kinase II subunit alpha' OS=Bos taurus GN=C... [more]
MK11_MOUSE1.849e-2634.15Mitogen-activated protein kinase 11 OS=Mus musculu... [more]
MK08B_CYPCA1.849e-2637.38Mitogen-activated protein kinase 8B OS=Cyprinus ca... [more]
PMK1_CAEEL2.414e-2638.54Mitogen-activated protein kinase pmk-1 OS=Caenorha... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionKN0AAH2CE06RM1 PhII-IIIV1 Citrus clementina cDNA clone KN0AAH2CE06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929471 ID=FC929471; Name=FC929471; organism=Citrus clementina; type=EST; length=815bp
GGCACGAGGCTAAAACTCACTTCTTTCACCGCCGCCGCTGCCTCCAATCA
CCTCACTCTTACTCCGGCGATCTCCCCCGTCGGCTTGGATCGTCCTCGCG
TCTGTTACTGTATTATGCATTTGTATTTTTCTCTTTCGTAAGCGGTTAAT
TTTTTCTTCATAACACACTGCCGCCACCTACGCCGTCGATTCGTGCCGTT
CTTGTCGCCGTCCGTCGGTAGCAAGTATGAAAAGGTTGAGAAGATTGGTG
AAGGAACCTATGGAGTAGTTTACAAGGCCCGTAATTGTGTCACGAATGAG
ACAATAGCATTGAAGAAGATCCGCCTTGAGCAGGAAGATGAAGGTGTGCC
TAGCACCGCAATTAGAGAAATTTCCCTCTTGAAAGAAATGCAGCATGGGA
ACATTGTTAGGTTGCAAGATGTAGTGCATAGCGAGAAGAAACTTTATCTG
GTTTTCGAGTATTTGGACTTGGATTTGAAGAAGCACATGGATTCTTGCCC
AGATTTTGCTAATGATCCTCGTCTGATAAAAACATTCCTTTATCAAATTC
TACGTGGCATTGCCTACTGCCATTCTCACCGGGTTCTTCATCGAGATTTG
AAACCACAAAATTTGCTAATAGATCGTCGTACGAATGCACTAAAGCTTGC
AGATTTTGGACTGGCCAGGGCTTTTGGTATTCCTGTTAGGACATTTACAC
ATGAGGTGGTGACATTGTGGTACAGAGCACCTGAAATATTACTAGGATCT
CGCCATTACTCTACTCCAGTTGATGTGTGGTCGGTGGGATGTATATTTGC
TGAGATGGTGAACCA
back to top